sp|Q9LIN9|PAGR_ARATH ----> Protein PECTIC ARABINOGALACTAN SYNTHESIS-RELATED
Intron 1 GTAAAGCGTA ... TCCTGGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 2 | 2 | 2 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 66.67 | 2 | 4 | 2 |
| A4 | 33.33 | 2 | 1 | 0 |
| A5 | -1 | 0 | 0 | 1 |
| A6 | 40 | 3 | 2 | 0 |
| A7 | 36.36 | 7 | 4 | 0 |
| A8 | 29.41 | 12 | 5 | 0 |
| A9 | 43.48 | 13 | 10 | 0 |
| A10 | 25 | 3 | 1 | 0 |
>TRINITY_DN102597_c0_g1_i1 from sample A3 / Example spliced isoformCTGGCATGTTCATGGGACTCTGTTTTTCATTTTGAACCGTAAAACGGAAGCTGGCATGTTCACGGGACTCTGTGCAGGGCATTGATTTCGATTTTGGACCGTAAATCCAAAACTCACATGACATTCATTCACTTCTTCGTCACCATGATAAGATAAATCTATACTATATACAACCCATTGGAGCATGCCAATTTTTTCGA
TCATGCAAAGTGCAAAACCATTTAACCAAAAGAAAGTTCTGACACCCATAGCCTAAGTCAAAAGATGAAACCAACCGTCAACTACAGACGAGCAACTACAGACGAGTACAGACAAGTACGCTGAAATTAATAACCATACTACTGGGCAGTAGAAAACCTCTTCCGGGATCAAATCAGAGATGGGTTCGGCGGAAATGCGG
AGATTTTCAATTCCAGCGTCTGGTGCCTCAGCCCTAATGGACTGCAAAGAAGAAGACGGGAGTTGTCATCACAGCAGCAAGCCCAGAGGATGGATTTTTTCACCACCGGTGTTTAGCAGTTACCTCTGGAGGGATTTTTGCAGGAAATTGTCCCTGGCTGTCCTGTCTGTAATCCTTGTAGCTGGCATTGTTCCATTATC
CCCTGTCTGGAACAACCTGAGTCCTCCATATCTGTGCAGAAAGGATGGGATTTTTCTCCGTTGCCCACATGTGAGAGAACAACCATCTCTTTGGGAGAATCCTTATTCTGCAACCACTTCATGGAAGCCTTGTGCTGGAAGACATGAAAGGAACTTTGGATATATTCCATCTGAGAACGAAACAAATGGATATATTCTCA
TTCATGCTGAGGGTGGATTGAATCAGCAGCGTGTTGCGATTTGCAATGCAGTGGCGGTGGCAAAAATAATAAACGCAACTCTTATTCTACCTTGTTTAAAGCAGGATCAGATCTGGAAAGATCAAACGAAGTTTGAAGATGTTTTTGATGTCAATCATTTTATTGAGTACTTGAAGTATGATGTACCAATTGTAAGGGAT
ATCCCTGCATGGTTTCCTGAAAAGGGAGAATTATTCACCAGCATCAGGAGAACTGTGAAAAACATTCCCAAGTATGCTTCGGCAGACTTTTATATAGATAATGTGCTCCCACGAATCAAGGAGAAGAAAATAATGGCTTTGAAGCCTTTTGTTGATAGGCTGGGATATGATAATGTTCCCCCGGAAATAAACCGGCTGAG
GTGCAGAGTCAACTACCAT
>TRINITY_DN102597_c0_g1_i2 from sample A3 / Example unspliced isoform:CTGGCATGTTCATGGGACTCTGTTTTTCATTTTGAACCGTAAAACGGAAGCTGGCATGTTCACGGGACTCTGTGCAGGGCATTGATTTCGATTTTGGACCGTAAATCCAAAACTCACATGACATTCATTCACTTCTTCGTCACCATGATAAGATAAATCTATACTATATACAACCCATTGGAGCATGCCAATTTTTTCGA
TCATGCAAAGTGCAAAACCATTTAACCAAAAGAAAGTTCTGACACCCATAGCCTAAGTCAAAAGATGAAACCAACCGTCAACTACAGACGAGCAACTACAGACGAGTACAGACAAGTACGCTGAAATTAATAACCATACTACTGGGCAGTAGAAAACCTCTTCCGGGATCAAATCAGAGATGGGTTCGGCGGAAATGCGG
AGATTTTCAATTCCAGCGTCTGGTGCCTCAGCCCTAATGGACTGCAAAGAAGAAGACGGGAGTTGTCATCACAGCAGCAAGCCCAGAGGATGGATTTTTTCACCACCGGTGTTTAGCAGTTACCTCTGGAGGGATTTTTGCAGGAAATTGTCCCTGGCTGTCCTGTCTGTAATCCTTGTAGCTGGCATTGTTCCATTATC
CCCTGTCTGGAACAACCTGAGTCCTCCATATCTGTGCAGAAAGGATGGGATTTTTCTCCGTTGCCCACATGTGAGAGAACAACCATCTCTTTGGGAGAATCCTTATTCTGCAACCACTTCATGGAAGCCTTGTGCTGGAAGACATGAAAGGAACTTTGGATATATTCCATCTGAGAACGAAACAAATGGATATATTCTCA
TTCATGCTGAGGGTGGATTGAATCAGCAGCGTGTTGCGATTTGCAATGCAGTGGCGGTGGCAAAAATAATAAACGCAACTCTTATTCTACCTTGTTTAAAGCAGGATCAGATCTGGAAAGATCAAACGAAGTTTGAAGATGTTTTTGATGTCAATCATTTTATTGAGTACTTGAAGTATGATGTACCAATTGTAAGGGAT
ATCCCTGCATGGTTTCCTGAAAAGGGAGAATTATTCACCAGCATCAGGAGAACTGTGAAAAACATTCCCAAGTATGCTTCGGCAGACTTTTATATAGATAATGTGCTCCCACGAATCAAGGAGAAGAAAATAATGGCTTTGAAGCCTTTTGTTGATAGGCTGGGgtaaagcgtaatatccttgcccaatcagagaaatgt
tacaattgtttcattcttgtttttccttgggtttcttcaccacttcaagcaacatgtgcagcatgttataattttacagggaaagtgaagcgttccatgatatttttctgaaaaccaggactatttcacaactgaaacaagatttataataaacttgccactctgttctgttgatttgcaacttatgtgagtataactga
agagagctgtgtttctgataatgctgtcgatgtcctggccagATATGATAATGTTCCCCCGGAAATAAACCGGCTGAGGTGCAGAGTCAACTACCAT