sp|Q9S7P9|SNP33_ARATH ----> SNAP25 homologous protein SNAP33

Intron 1 GTTTGTTGAA ... CATTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	35	39	4.5	21
A2	26.87	49	2.5	18
A3	32.39	48	7	23
A4	45.76	32	1.5	27
A5	35	13	0	7
A6	31.43	312	19.5	143
A7	32.24	252.3	13.5	120
A8	30.94	288	16	129
A9	34.33	176	9	92
A10	34.22	167.3	11.5	87

>TRINITY_DN118795_c5_g1_i1 from sample A2 / Example spliced isoform

GGCATTTTTTCCAAAAAAATGGAAACCCGAATGGACTCGGCCAACAACTGGTCCTGTACTTATGCGATGTACTTATGCGAGATGATTCGTTCAAAAGAAGAGGAAAACACATGGAACAAAGGGCAGCATTAGGGCTTGTCAAGAGCCCAAAGGGCAGATCATCTGCCAGAACTTACCCTTTGGCTGCAGATACACCTCAA
GCTCGGGTTGAGGTAGAAAAAGCAAAGCAGGATGATACTCTATTGGATTTGAGTAACGTGCTTGACCAATTGAAGGAAATGGCTGTTGACATGGGGAGCGAGATAGAAAGGCAAAATCATGCTCTAGATCCTCTTGGTGATGATGTTACAGAACTTAGCTATCGTGTTAAAGGAGCCAATGCACGTGGTCGTCGTTTGCT
TGGAAAATGACCATAATATTTGATGGTTGCAGTACTGTGTTTTCTTTTGAATCTTTTGGATAGTGCGGTTGCCAGCTCTAGACCTCATCTACGTGTAAGATTTTTTTTCTAGGGATGCTACAGAAGCATCTAAGACCAATTGTTGCAGTGTGTAGGAGAAGGCATTGGACTTACAAGATATGTAAACAGAAGTTATCATT
GGGCAAAAGTCCAGGCATAAGAGTCTGCTTGAAGGAGCTCTATTGTACTACCACTTGTTTATGGGATAAAATTAATATTTGTAATAGTATTTATTTCTTCTAATAAAAGAGTGTCATTGGATAAAAA

>TRINITY_DN118795_c5_g1_i4 from sample A2 / Example unspliced isoform:

TGTACTTATGCGAGATGATTCGTTCAAAAGAAGAGGAAAACACATGGAACAAAGGGCAGCATTAGGGCTTGTCAAGAGCCCAAAGGGCAGATCATCTGCCAGAACTTACCCTTTGGCTGCAGATACACCTCAAGCTCGGGTTGAGGTAGAAAAAGCAAAGCAGGATGATACTCTATTGGATTTGAGTAACGTGCTTGACC
AATTGAAGGAAATGGTGGTTGACATGCGGAGCGAGATAGAAAGgtttgttgaattcttatgacatgcagaaaagctgacattgtatttgttaacataaggtttcgcaaagttgtgtgcatggagtatgtcaatagtcatacttattggtaagttttgcattttgcagGCAAAATCATGCTCTAGATCCTCTTGGTGATGA
TGTTACAGAACTTAGCTATCGTGTTAAAGGAGCCAATGCACGTGGTCGTCGTTTGCTTGGAAAATGACCATAATATTTGATGGTTGCAGTACTGTGTTTTCTTTTGAATCTTTTGGATAGTGCGGTTGCCAGCTCTAGACCTCATCTACGTGTAAGATTTTTTTTCTAGGGATGCTACAGAAGCATCTAAGACCAATTGT
TGCAGTGTGTAGGAGAAGGCATTGGACTTACAAGATATGTAAACAGAAGTTATCATTGGGCAAAAGTCCAGGCATAAGAGTCTGCTTGAAGGAGCTCTATTGTACTACCACTTGTTTATGGGATAAAATTAATATTTGTAATAGTATTTATTTCTTCTAATAAAAGAGTGTCATTGGATAAAAA

Intron 2 GTGGGTGGTT ... TCTGATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	34.69	32	17	6
A2	28.57	20	8	0
A3	20.83	19	5	0
A4	31.25	22	10	1
A5	25.81	23	8	0
A6	18.18	135	30	2
A7	20.71	134	35	0
A8	11.96	81	11	2
A9	26.52	97	35	4
A10	19.82	89	22	0

>TRINITY_DN114733_c0_g1_i2 from sample A1 / Example spliced isoform

CCAAAAGAAAATGTCCATCTGATTGGAAAATGATTTTATTGGGGTAACTTGTCATTGTCTTTCCGACAAAGCAGTTTTCAGTTTTTGGTCGACATTTTCCACGCCCATTAAATTTGTCAAACATTCTCGGTGGCCTACTCCAATAAAATTTGGATGATCTTCTACATGTTAATAAATTTATTTGTAAGGCCTGGTCTCAC
TTTGTGACTTATTCAAACCGCGTAGGCTACCATTTCTCTTCCAATTCTGCAGCAGACTTTCATGGAAATTCAAAGAGTGCACCATCACCGTGGTCTCCACTCCATCCCTTATATGTGAATCTCTCTGCTCCGTCTTCATATATGCTTTGATCGATCGATTCGATTTCTCTCTGCTTTGCCCGATTGATTGATAGATTGAA
TTCCAGTTTAAAGTAAGGTCAGGGATTTCTGATAGATAAAATCAATGGCGAGAAGAAATGGTATCGGCTCTCACAATCCCTTCGACTCAGACGGCGAAGAAGCCAACCGACATCCGACTTCGAAATCGCGGGAGAAAAAATACACGAACCCTTTCGACGACGACGGCCATAGGGTTTCTGGTTCGAGTCCCATCAAGACA
ACTTCGACATCGCGGGAGAAAAAATACACGAATCCTTTCGACGACGGCCTCCATGAGGTTTCGGGTTCGAGTCCTGGCAAGAAGCTCGTCGCCAAACAAGTACGGTTCCATTCCAGCAGGAGACGGGTAGAAATCCCTGATGTTCAGACCGGCAATCCGTTCAGCGAGGGCGAAGAGGAAGAAGAGCCCGTGGCGCGTAA
TAATAACAATCCCAGGGATTCAAAAGCCAGATTCAGTGAAAATACCGGTCGTTCTAATGAGGGCTTGAGCGCAAATAAAGGTGAAAGTTTTATCTCCAACGTGAAACAGCGCGCGGCTTCGGTGGGCGAATCGGCTGTGAGATCTGCTGAAAAAGTGAAAGAAACGGGTGCTCATCATGCCCACAAGATCCGAATCAGAA
AATCCGGCGGCTCTGCATCAATCAATTCTGGTAAGGAGCTCCCTAATTCGAGCTCTTCATCGTTTGATAACTCGGTCAATGGGATCCCCAACTCGAGTTCTCAAGAGAGAAAAGAGCTGTTCTCAGGGTTTGAAGGGAAGGGTACTTCTTCTTCTTCGTCTTCATTAATGCGCAGTAGTTATAAGAATGATTTCCGGGAC
AGCGGAGGGTTTGAGAATCAATCGGTCCAGGAATTGGAGAGCTATTCCGTTTACAAGTCCGAGGAGACCACAACGACTGTCAATAATTGTCTGAAACTTGCTGAGAATATTAAGGAGGATGCTACCAAGACGTTGATTACGCTGCATCAGCAGGGTGAGCAGATTACACGAACCCATAATGTGGCGGCCGACATTGATTA
TAACCTCAAAGCTGGTGAAAAGCTTCTTGGTAATTTGGGGGGCATCTTTTCCAAAAAATGGAAACCTGAAAGGACGCGGCCAATAACTGGTCCTGTACTTATGCGAGATGATTCGTTCAAAAGAAGAGGAAAACACATGGAACAAAGGGCAGCATTAGGGCTTGTCAAGAGCCCAAAGGGCAGATCATCTGCCAGAACTT
ACCCTTTGGCTGCAGATACACCTCAAGCTCGGGTTGAGGTAGAAAAAGCAAAGCAGGATGATACTCTATTGGATTTGAGTAACGTGCTTGACCAATTGAAGGAAATGGCTGTTGACATGGGGAGCGAGATAGAAAGGCAAAATCATGCTCTAGATCCTCTTGGTGATGATGTTACAGAACTTAGCTATCGTGTTAAAGGA
GCCAATGCACGTGGTCGTCGTTTGCTTGGAAAATGACCATAATATTTGATGGTTGCAGTACTGTGTTTTCTTTTGAATCTTTTGGATAGTGCGGTTGCCAGCTCTAGACCTCATCTACGTGTAAGATTTTTTTTCTAGGGATGCTACAGAAGCATCTAAGACCAATTGTTGCAGTGTGTAGGAGAAGGCATTGGACTTAC
AAGATATGTAAACAGAAGTTATCATTGGGCAAAAGTCCAGGCATAAGAGTCTGCTTGAAGGAGCTCTATTGTACTACCACTTGTTTATGGGATAAAATTAATATTTGTAATAGTATTTATTTCTTCTAATAAAAGAGTGTCATTGGATACACAAAC

>TRINITY_DN114733_c0_g1_i1 from sample A1 / Example unspliced isoform:

CCAAAAGAAAATGTCCATCTGATTGGAAAATGATTTTATTGGGGTAACTTGTCATTGTCTTTCCGACAAAGCAGTTTTCAGTTTTTGGTCGACATTTTCCACGCCCATTAAATTTGTCAAACATTCTCGGTGGCCTACTCCAATAAAATTTGGATGATCTTCTACATGTTAATAAATTTATTTGTAAGGCCTGGTCTCAC
TTTGTGACTTATTCAAACCGCGTAGGCTACCATTTCTCTTCCAATTCTGCAGCAGACTTTCATGGAAATTCAAAGAGTGCACCATCACCGTGGTCTCCACTCCATCCCTTATATGTGAATCTCTCTGCTCCGTCTTCATATATGCTTTGATCGATCGATTCGATTTCTCTCTGCTTTGCCCGATTGATTGATAGATTGAA
TTCCAGTTTAAAGTAAGGTCAGGGATTTCTGATAGATAAAATCAATGGCGAGAAGAAATGGTATCGGCTCTCACAATCCCTTCGACTCAGACGGCGAAGAAGCCAACCGACATCCGACTTCGAAATCGCGGGAGAAAAAATACACGAACCCTTTCGACGACGACGGCCATAGGGTTTCTGGTTCGAGTCCCATCAAGACA
ACTTCGACATCGCGGGAGAAAAAATACACGAATCCTTTCGACGACGGCCTCCATGAGGTTTCGGGTTCGAGTCCTGGCAAGAAGCTCGTCGCCAAACAAGTACGGTTCCATTCCAGCAGGAGACGGGTAGAAATCCCTGATGTTCAGACCGGCAATCCGTTCAGCGAGGGCGAAGAGGAAGAAGAGCCCGTGGCGCGTAA
TAATAACAATCCCAGGGATTCAAAAGCCAGATTCAGTGAAAATACCGGTCGTTCTAATGAGGGCTTGAGCGCAAATAAAGGTGAAAGTTTTATCTCCAACGTGAAACAGCGCGCGGCTTCGGTGGGCGAATCGGCTGTGAGATCTGCTGAAAAAGTGAAAGAAACGGGTGCTCATCATGCCCACAAGATCCGAATCAGAA
AATCCGGCGGCTCTGCATCAATCAATTCTGGTAAGGAGCTCCCTAATTCGAGCTCTTCATCGTTTGATAACTCGGTCAATGGGATCCCCAACTCGAGTTCTCAAGAGAGAAAAGAGCTGTTCTCAGGGTTTGAAGGGAAGGGTACTTCTTCTTCTTCGTCTTCATTAATGCGCAGTAGTTATAAGAATGATTTCCGGGAC
AGCGGAGGGTTTGAGAATCAATCGGTCCAGGAATTGGAGAGCTATTCCGTTTACAAGTCCGAGGAGACCACAACGACTGTCAATAATTGTCTGAAACTTGCTGAGAATATTAAGGAGGATGCTACCAAGACGTTGATTACGCTGCATCAGCAGGGTGAGCAGATTACACGAACCCATAATGTGGCGGCCGACATTGATTA
TAACCTCAAAGCTGGTGAAAAGCTTCTTGGTAATTTGGGGGGCATCTTTTCCAAAAAATGGAAACCTGAAAGGACGCGGCCAATAACTGGTCCTGTACTTATGCGAGATGATTCGTTCAAAAGAAGAGGAAAACACATGGAACAAAGGGCAGCATTAGGGCTTGTCAAGAGCCCAAAGGGCAGATCATCTGCCAGAACTT
ACCCTTTGGCTGCAGATACACCTCAAGCTCGGGTTGAGgtgggtggttgatgtatttgttgtgagcaaagcttttcatatgaatttggacacctggatgaatttggggttattctgatgcagGTAGAAAAAGCAAAGCAGGATGATACTCTATTGGATTTGAGTAACGTGCTTGACCAATTGAAGGAAATGGTTGTTGAC
ATGCGGAGCGAGATAGAAAGGTTTGTTGAATTCGTATGACAGGCAAAAAAACTGACATTGTATTAGTTAACATAAGGTTTCACAAAGTTGTGTGCATGG