sp|Q9LK09|SYP32_ARATH ----> Syntaxin-32

Intron 1 GTAAGTTTGG ... GTTTCTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	20.22	146	0	37
A2	30.18	118	2	51
A3	28.74	119	5	48
A4	27.11	121	0	45
A5	21.33	59	1	16
A6	24.51	77	0	25
A7	25.35	159	2	54
A8	32.32	67	1	32
A9	27.95	183	1	71
A10	25.59	157	0	54

>TRINITY_DN45709_c2_g5_i2 from sample A8 / Example spliced isoform

GACCAAATGCTTAGCCACACCCTAAGAATCAAGCATCGCTTAAGTCGACCTTCACAACACGGAGGCAGCCGTAGGGGTAGCCCCTCCTGTCATTCGAAAATTTGACCACTATATGTTTTGAAGTGACACCGAGCATGACGCGCTGAGCGAAACCCCAAAGACAAATAACGATCCTCGTTACACATTTGCATTACAATCCG
AACAGATCAGGGCGGGACGCGTCTTTACTGTTCGATGCAATTGATACATTATCGCATGTATGGGGTTTTCCGCATCAATAGTTGCAGTTTTATAAACAATTGGAGGCTGGCGAGGTTTATTTCTTTGTTAACTTCGCTCTGTTACAGATCTGAGACACGTAACCGCACAGGGTTTTGGCATACAATTGTTTTTACATTTG
GGTTACAGTAATTCATGTGTAGATTTGTGGATCTGGGTAGCGGGATATATCTTCAGTTTTCAGCCAAGGAAAGGGATATGCAAACGCAATCACCATTAGAGTTTTTATCCTACAGCAATCGTGTTTTTGCTTGACCTTATGAGTTGCATTTGGTGAAAAAAGTTTCAAAAAACAATTGCGTTTGGGCATCTTTCTGGCGG
GTGTTTCGAATTGCAAGCCCGGCATCGGGTTTTCAGAAGCAGCAAGGCAATAATTGGTAAAGAAAAACTCGGAAATGTCTATGAGACCTGCTCAATCGTCCTCTTACCGGGATAGGACAACAGAATTCCAGACTATAGTAGAGAGACTACGGAAATCTTATTCTTCTTCCGAATTTTCCCAATCGAATGGATCTACCGAT
AACACAAAATATGCAGGATCGAGATCTGTTGGTTCTGTGCAGTCCGAGTTCAATAAGAGGGCATCCAGAGTTGGATTCGGCATACATCAGACATCTCAAAAACTTGCCAAACTCGCAAAATTGGCCAAAAGAACATCAGTGTTTGATGATCCAACTGTAGAGATCCAAGAGCTTACAGCTGTTATTAAGCAGGATATTAC
TGCATTAAATTCTGCAGTTGCAGACCTGCAAATCCTCTGCAATTCTCAAAATGAAAGTGGGAATACCTCAAAACATACAACAGAACATTCAACTACAGTTGTGGATAACTTAAAAACTCGATTGATGAGCACTACGAAAGAGTTCAAGGAGGTGTTGACTATGCGAACTGAGAATTTGAAGGTACATGAGAATAGAAGAC
AGCTGTTTTCTGCTAGTGCTTCAAAAGATTCTACAAATCCTTTCGTCCGACAACGCCCTCTTGCAAGTACTAGTCGCACCGGTGTTTCCCCTCCTCCTTGGGCCAATGGATCAACATCTTCATCACAGATTTTCAACCCACGGCGGCAATCAAGTGGAGAGCCTCCCGCATCTCCCAGTACACAAACACAGCTTCAACAA
CAAATGGTTCCTTTACAAGATAGCTATATGCAAAGCAGAGCTGAAGCTCTCCAAAATGTAGAATCAACTATTTTGGAGCTCAGTAACATCTTCACACAGCTGGCTACCATGGTTT

>TRINITY_DN45709_c2_g5_i3 from sample A8 / Example unspliced isoform:

ACAATTGGAGGCTGGCGAGgtaagtttggaaggttttttggcaaaatttttcatacccatcatgcaaacatattttgtttcaaggtgttcacgaggtcgattcccgaagcgttaatactgaatcgtaatctgtacccaacagtgtcctcctcgtattgtgatccagagaacgacctcaattactctatttgaagccctct
cgtgaaccctatatatgtccaattcacttaaatttatcttggttttggggtttctgcagGTTTATTTCTTTGTTAACTTCGCTCTGTTACAGATCTGAGACACGTAACCGCACAGGGTTTTGGCATACAATTGTTTTTACATTTGGGTTACAGTAATTCATGTGTAGATTTGTGGATCTGGGTAGCGGGATATATCTTCA
GTTTTCAGCCAAGGAAAGGGATATGCAAACGCAATCACCATTAGAGTTTTTATCCTACAGCAATCGTGTTTTTGCTTGACCTTATGAGTTGCATTTGGTGAAAAAAGTTTCAAAAAACAATTGCGTTTGGGCATCTTTCTGGCGGGTGTTTCGAATTGCAAGCCCGGCATCGGGTTTTCAGAAGCAGCAAGGCAATAATT
GGTAAAGAAAAACTCGGAAATGTCTATGAGACCTGCTCAATCGTCCTCTTACCGGGATAGGACAACAGAATTCCAGACTATAGTAGAGAGACTACGGAAATCTTATTCTTCTTCCGAATTTTCCCAATCGAATGGATCTACCGATAACACAAAATATGCAGGATCGAGATCTGTTGGTTCTGTGCAGTCCGAGTTCAATA
AGAGGGCATCCAGAGTTGGATTCGGCATACATCAGACATCTCAAAAACTTGCCAAACTCGCAAAATTGGCCAAAAGAACATCAGTGTTTGATGATCCAACTGTAGAGATCCAAGAGCTTACAGCTGTTATTAAGCAGGATATTACTGCATTAAATTCTGCAGTTGCAGACCTGCAAATCCTCTGCAATTCTCAAAATGAA
AGTGGGAATACCTCAAAACATACAACAGAACATTCAACTACAGTTGTGGATAACTTAAAAACTCGATTGATGAGCACTACGAAAGAGTTCAAGGAGGTGTTGACTATGCGAACTGAGAATTTGAAGGTACATGAGAATAGAAGACAGCTGTTTTCTGCTAGTGCTTCAAAAGATTCTACAAATCCTTTCGTCCGACAACG
CCCTCTTGCAAGTACTAGTCGCACCGGTGTTTCCCCTCCTCCTTGGGCCAATGGATCAACATCTTCATCACAGATTTTCAACCCACGGCGGCAATCAAGTGGAGAGCCTCCCGCATCTCCCAGTACACAAACACAGCTTCAACAACAAATGGTTCCTTTACAAGATAGCTATATGCAAAGCAGAGCTGAAGCTCTCCAAA
ATGTAGAATCAACTATTTTGGAGCTCAGTAACATCTTCACACAGCTGGCTACCATGGTTT