sp|O22765|TRPA1_ARATH ----> Tryptophan synthase alpha chain
Intron 1 GCAGCTGCAA ... TCTACAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 48.33 | 31 | 32 | 26 |
| A2 | 48.15 | 28 | 26 | 26 |
| A3 | 56.06 | 29 | 41 | 33 |
| A4 | 49.55 | 28 | 26 | 29 |
| A5 | 46.15 | 21 | 16 | 20 |
| A6 | 51.18 | 93 | 102 | 93 |
| A7 | 48.84 | 88 | 85 | 83 |
| A8 | 47.26 | 77 | 72 | 66 |
| A9 | 50.14 | 89 | 94 | 85 |
| A10 | 49.42 | 109 | 113 | 100 |
>TRINITY_DN109464_c9_g1_i3 from sample A3 / Example spliced isoformATTGATTCCTATTGCAGCAATCACATGAGAAACATCTATTTTTACTCATTGCAATTTTTTGTTGTTCGTTTGCGTTGATTACGGCGATTGCTGATAATAAATTCTATGAGTGCGCCCCATTCATGAGTTTTTCGTTCGGGATGTGCACTCCGACTAATTTTTAAACGAGAAATGAAACCATAAACTAGCAAATGATGTCA
AACCTATACTGTTGATAGTCCAAAACAATTTGCATTCAATCGATACGATTCAAAATCAGACTCAAGTTACATTCGACACCATGTCCTTTGATCAGAGAACCCTTTGGTGTTGATGTCTAATGAAGGCCTGTGAGAAACCTATCCTCTTTTGCCGCTGTAACAGATGTGAAATCTTGCTTTTCCAAAATGTTCTAAACTTC
TATTTTGAGGCTCAAAGTAGGCCATATCCATCGATTTGACTGATCAGAAGAAGCACAGCAGAGCATTTGTGTTTTTTTAGTCCTAGGTTCGTGCATGTAAGGATGGCGAACCAGAGCATTTTGTTTTCATCGCCAACTCCTCTATGTTTTGGACAAAAATGTTTATTACCCACAACCAGATTGGCGTATTTGTCCAGCTC
TGTGAATGCATTCCCCCAGAAACTGGTTGCCAACAACACCCATTCTCTGCGACTGGGAACGGACATGGACGTGTTTCACACCAAAGTTATCAGGACCAGGACAGTTAGAGCGATTGCAGCTGGAGAAATCGCGAGTGGCGTGGAATCCCCCAGCATTTCTGAAACGTTTGCCAATCTCAAGAAGCGTGGAAAGGTAGCTC
TCGTGCCTTACATAACTGCAGGGGATCCTGATATATTAACTACAGCCAAAGCACTCAAAGTGCTGGATTCATGTGGGGCTGATATAATAGAACTGGGAGTGCCATACTCTGATCCTCTTGCTGATGGGCCAGTCATACAGGGTACAAACTTTGATGCAGTTATTTCAATGCTTAGAGAGGTGATTCCGCAATTGAAAGCT
CCACTTGTGTTGTTTTCCTACTACAATCCAATCTTAAAGCGTGGCCCAGAAAGCTTCATGCATACGATCAAATCAGTAGGGGTTCGTGGTCTTGTTGTCCCAGATGTTCCATTGGAAGAGACAAAAAATCTGAGAAGGCTTACAGCTGCAAATAAAATAGAACTTGTACTCCTCACAACTCCAACTACTCCTACAGAACG
GATGAAATTGATCGTTGAAGCTTCAGAAGGCTTTATATATCTTGTGAGCATAACTGGTGTGACTGGTGCCCGTGCTTCTGTAGAATCACGTGTTGAGCTTCTTCTTCGAGAAATTAAAAAGGCTACATCTAAACCAGTGGCTGTTGGATTTGGTATCTCCAAGCCAGAGCATGTGGCGCAGATTGCACAATGGGGAGCAG
ATGGAGCAATTGTGGGCAGTGCAATGGTGAAGTTGCTTGCAGAAGCGAAGTCCCCGGAAGAAGGACTCAAGCATCTCGAGACCCTTACTCGAAATCTTAGGGCTGCAATTCCGTAGTCTATTCTATGATGTAAGAATGTCTCCTGGGTTCCTGGAATGCTTGCTGCTCCTGAAATTGGTTTTCCATCTTTTTGAATGTAT
ACATTAATATTCAAGCAGTCTGTCGATAAGATGTTGGACTCGTGCTGTCAGTGGGAACCAGAAAGTGGGTGATTGAATCTCAGTCTTTTAGTTCTTGCTTCCAGGGAGATTTTGTTGTCGTCTCTCTTTGGTTGATTTGTCCTTCCGTAAAAAGGTGTTGGCCTAATTTTGTCATGCTAGCTGAGGTTAATTTTCCTGAA
TAATTTTATGATACAAACGAGAGTCTTTACTCCGAGATCATGATTGACGTCATGTTTTCAGTAAAAGCATTAGATTTCCAGAACCAAAAGAGTTCCACAATAGCCGTTCTATATTGTTACTCAAAGAAGTATTGCGAGTTTCTCTTCTAAAAAAAA
>TRINITY_DN109464_c9_g1_i2 from sample A3 / Example unspliced isoform:ATTGATTCCTATTGCAGCAATCACATGAGAAACATCTATTTTTACTCATTGCAATTTTTTGTTGTTCGTTTGCGTTGATTACGGCGATTGCTGATAATAAATTCTATGAGTGCGCCCCATTCATGAGTTTTTCGTTCGGGATGTGCACTCCGACTAATTTTTAAACGAGAAATGAAACCATAAACTAGCAAATGATGTCA
AACCTATACTGTTGATAGTCCAAAACAATTTGCATTCAATCGATACGATTCAAAATCAGACTCAAGTTACATTCGACACCATGTCCTTTGATCAGAGAACCCTTTGGTGTTGATGTCTAATGAAGGCCTGTGAGAAACCTATCCTCTTTTGCCGCTGTAACAGATGTGAAATCTTGCTTTTCCAAAATGTTCTAAACTTC
TATTTTGAGGCTCAAAGTAGGCCATATCCATCGATTTGACTGATCAGAAGAAGCACAGCAGAGCATTTGTGTTTTTTTAGTCCTAGGTTCGTGCATGTAAGGATGGCGAACCAGAGCATTTTGTTTTCATCGCCAACTCCTCTATGTTTTGGACAAAAATGTTTATTACCCACAACCAGATTGGCGTATTTGTCCAGCTC
TGTGAATGCATTCCCCCAGAAACTGGTTGCCAACAACACCCATTCTCTGCGACTGGGAACGGACATGGACGTGTTTCACACCAAAGTTATCAGGACCAGGACAGTTAGAGCGATTGCAGCTGGAGAAATCGCGAGTGGCGTGGAATCCCCCAGCATTTCTGAAACGTTTGCCAATCTCAAGAAGCGTGGAAAGGTAGCTC
TCGTGCCTTACATAACTGCAGGGGATCCTGATATATTAACTACAGCCAAAGCACTCAAAGTGCTGGATTCATGTGGGGCTGATATAATAGAACTGGGAGTGCCATACTCTGATCCTCTTGCTGATGGGCCAGTCATACAGgcagctgcaacgagagctctacaaaagGGTACAAACTTTGATGCAGTTATTTCAATGCTT
AGAGAGGTGATTCCGCAATTGAAAGCTCCACTTGTGTTGTTTTCCTACTACAATCCAATCTTAAAGCGTGGCCCAGAAAGCTTCATGCATACGATCAAATCAGTAGGGGTTCGTGGTCTTGTTGTCCCAGATGTTCCATTGGAAGAGACAAAAAATCTGAGAAGGCTTACAGCTGCAAATAAAATAGAACTTGTACTCCT
CACAACTCCAACTACTCCTACAGAACGGATGAAATTGATCGTTGAAGCTTCAGAAGGCTTTATATATCTTGTGAGCATAACTGGTGTGACTGGTGCCCGTGCTTCTGTAGAATCACGTGTTGAGCTTCTTCTTCGAGAAATTAAAAAGGCTACATCTAAACCAGTGGCTGTTGGATTTGGTATCTCCAAGCCAGAGCATG
TGGCGCAGATTGCACAATGGGGAGCAGATGGAGCAATTGTGGGCAGTGCAATGGTGAAGTTGCTTGCAGAAGCGAAGTCCCCGGAAGAAGGACTCAAGCATCTCGAGACCCTTACTCGAAATCTTAGGGCTGCAATTCCGTAGTCTATTCTATGATGTAAGAATGTCTCCTGGGTTCCTGGAATGCTTGCTGCTCCTGAA
ATTGGTTTTCCATCTTTTTGAATGTATACATTAATATTCAAGCAGTCTGTCGATAAGATGTTGGACTCGTGCTGTCAGTGGGAACCAGAAAGTGGGTGATTGAATCTCAGTCTTTTAGTTCTTGCTTCCAGGGAGATTTTGTTGTCGTCTCTCTTTGGTTGATTTGTCCTTCCGTAAAAAGGTGTTGGCCTAATTTTGTC
ATGCTAGCTGAGGTTAATTTTCCTGAATAATTTTATGATACAAACGAGAGTCTTTACTCCGAGATCATGATTGACGTCATGTTTTCAGTAAAAGCATTAGATTTCCAGAACCAAAAGAGTTCCACAATAGCCGTTCTATATTGTTACTCAAAGAAGTATTGCGAGTTTCTCTTCTAAAAAAAA