sp|O80386|CIP7_ARATH ----> COP1-interacting protein 7
Intron 1 GTACAACATC ... ATTGTATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 8 | 4 | 4 |
| A2 | 63.64 | 8 | 19 | 9 |
| A3 | 51.72 | 7 | 9 | 6 |
| A4 | 83.33 | 1 | 3 | 7 |
| A5 | 100 | 0 | 1 | 0 |
| A6 | 44.83 | 8 | 7 | 6 |
| A7 | 57.69 | 11 | 15 | 15 |
| A8 | 39.62 | 16 | 11 | 10 |
| A9 | 42.11 | 11 | 7 | 9 |
| A10 | 53.19 | 11 | 17 | 8 |
>TRINITY_DN108264_c0_g3_i3 from sample A2 / Example spliced isoformCATGGAGAGACGATGCAGACACTCGATCTTCAGGATCTGACATGTCCATTGAGAATGGTACAGATGGAGAGCTGGCATTCGATGCTTCATCTGACCTTTTATCCAAGAAAGGTGATAAACCTTCTGGCTATTGGTCTTATGCCCAAGGTGAAAGCAGGGACATGGGGTATGGAAGTCAAACTTCAGCTTCAACTGCAGCA
CGAGTTCAAGAGGATCAGCAAGGCATTAAAGCATCTCATTCACGGACACAATCTATTGATTATCGTGAAAGCATTTCCTCTTCCACTGGTGGGGCTAATGTCATCAACAGCCGGGAAAGCATGTCAAGGACAAAAAATTCCCTTGTCAGAGGTGATAGCATGAACAAACCAACTACTGAGGCAAGTCCTGAATCTTTAAA
GATGGGTTCAGATAACCTCAAACAGTCTCAAGATGGCACAAGCAGACTACAGTCAGGTTCGCCTGGCAGAACATCCTCTTCTCCAGCACAAGGAGTTCAGACAGGGAAAAGTGTATCTGGAGTGAGTAAAAATAGCAGTCATGTGGATGACCAGTCTCATAGAGTTAAGCCTTCGAATAAGGAAAATAGTGACAGCGACA
CTGAAAGTAATGTTGGTGACAAACAAGAGCCAGAGCCTGTTCAAAAATTCCAGCCCTCCAGAAGGCTTAGTGTTCAAGACCGCATCAACCTCTTTGAAAGCAAGCAGAAGGAACAACAACGAGACTCAAGTGATGGCATCAAAAAATTGGAAGGAGAGAAATAAAAAAATCATTTGAAAGTGGCAAATCCAGTGCCATAA
CTGAGAAGGTTGTTTTTAGGAGATGGAGTGGAGCTAGTGACACAGGTATGAAGGTCTCAGCACTCAAGCAAGCAAAGGATGGCAGTCAAAATCAAAGTACTTTTGTGCCATCATCTGGGAGCAAGTCGGATGTGGAAACCTCTTCATCTCAAAGCATAGGTCAGTCATCACAGATTGTAGTGGGAAATCAAAGTTCAGCT
GAGGACACTCCTCAGAGTGAGTTTAGACTACTAGATAATACTTATCAAGGTGCCAATGAAAAGAAAGATGAAGGTTTGACTCCCCTTGCTCAGCACACTGATAAAACTGATGAACTTTGTGTCTCATCCTGCAATGGACAAATTTCGAATACAGATCAAGATTTGCCAGTAGTTATGCAAATGAATAATATGAGAGTAAG
CAAGAAAGAATTATTACAAACATCTTTGCAAAAATCACAAATGGCTGCTTTTCCTGTCAGGCATGAATCAAAAGCTGCTTATGTTTCTTCACATATGAGAAGTAGGTCTAGTGGATGTGAACCCATCACAACATTTTCTCTTAAAGCCACACAGCCAAAGAGCAGCAATAAGTGGAGGGAGGAGCTTGGGGAAAAAGCTA
ACCAATTGGAGGCTTTATTTGCTGCCCACAAACTCAGAAGCCACTCACAAAGAGCAAGTAAACAAGAGAAAATGCACATGGCTCGAAAGGAAAAGAGTCTAGGAGTTGAACCTGACAATCTGCTCACCATGCCTGTGCAGAATATAGGGAGAGAATCACTTGGTAGCTCATCGAGCAATGGAGTGGATTCTGATATGCAA
GCCTTGATGAACATGGTTGATGTCAATCATGTCAACAACTGCTGTCAAGAGAAATTGTTGTGCTTTGCTAATGATCAGGAGTTTAGAGGCAAATTCTATGATCAGTATAATGAGAAACGCGATGCAAAGCTAAGGGATGAGAAAACTACAAAACGGGCAGAGAAAGAAGCTAACTTAAAGGCTATGCAAGAAGTCTTAGA
GCAAAGACAAGCTGAAATGGCAGCAACGAGTGCAACTAAAAATGATCCTCTTGGCTGTTCAGAGGACATGCCAAAGGACCTGCCAAAGGCAAATGGATCAAGGAAATTCTCATCAAAAACCATGCCAGCAAGGAGTTCTTTATCCCTGACATCTTTATCGCCAAGGATCATCTTACCTGGTAAAGTTTCAAGTTCCACTA
ATACATCTTCAAGTAGGCATAGGAATCAGCCAGAAAATCCTTTGGTTCAGTCAGTTCCCAACTTTACGGATCTTAGGAAAGAGAATACAAAGCCCTCACTTGGCAGAGGCACCTCAAATTCATCAGTGCTTGGTAAAGGCCCTAAGTCTCAAGGAGGGCTCAAAAACAACACAAAAACTGTTGGTGGAAGGGAGCCTTTT
CAAGACACTATTACTACTGGTTCTGGTTCAACTGCACGAATTGCCAACAGTAAAGAAGAGAAAAATGGCCCTAGTCAAGCAGCATTGAGGAAAAGTACATATGCGTCTCTTATGAGTGAGGCTAGTGAAAAAGTTCCAAAAGGAGCAGCATTGGAACCAAACAACTGCAGCAAACTGACCAGCAAAAGCAGCCCTGCCAC
CTTGGAAGCTAAACCTTTTCTTCGCAAAGGAAGAGGAATAGGTCCAGGTGCAGGACCAGGAATTGCCAAGCTGAAACAATTTCTTGCAGCAGAGGATGGCTTGAAGAGTGCCGAGGAAGGTCAAGTCAGTGATCAAAATGGTGGAGAAACTGTGGAAGAACTGGTAAATATATCACAACTACTGTGTACTCGTGAAGGAG
CAGAAGCAGAAGCAGCAGAGGAAGAAGAACGTGACAAGCTGACAAGTGATGATAATGAAAGATCAGATAATCATGATGATTCAGAGACATCACAAACTGACATGCAAGGTGATCGTGCCAGTGCTTCTGTCTCTCCCCTTGAAATGCCATCCTCTCCTACAGCTACAAATAATGAATATTATGAATGTAATGAAAAAATG
GCTTGCAATGCAGAAGCTTCAATGACAGATCATGTTAGTACATCTGCAGCAGTGGCCATGCAAACTGACTCTACATTAGGAAGTGCTGCATCATGGAATTCACACATGCAATATCCTCATTCTCAGATGTCAGAGGCTTCTGAAATCGATACTGGTGTTCGACCTCGTAAAAAATGGGCACCGGCACAAAAGATAGTTCT
TGCTACTGCTCTTCAGCA
>TRINITY_DN108264_c0_g3_i4 from sample A2 / Example unspliced isoform:CATGGAGAGACGATGCAGACACTCGATCTTCAGGATCTGACATGTCCATTGAGAATGGTACAGATGGAGAGCTGGCATTCGATGCTTCATCTGACCTTTTATCCAAGAAAGGTGATAAACCTTCTGGCTATTGGTCTTATGCCCAAGGTGAAAGCAGGGACATGGGGTATGGAAGTCAAACTTCAGCTTCAACTGCAGCA
CGAGTTCAAGAGGATCAGCAAGGCATTAAAGCATCTCATTCACGGACACAATCTATTGATTATCGTGAAAGCATTTCCTCTTCCACTGGTGGGGCTAATGTCATCAACAGCCGGGAAAGCATGTCAAGGACAAAAAATTCCCTTGTCAGAGGTGATAGCATGAACAAACCAACTACTGAGGCAAGTCCTGAATCTTTAAA
GATGGGTTCAGATAACCTCAAACAGTCTCAAGATGGCACAAGCAGACTACAGTCAGGTTCGCCTGGCAGAACATCCTCTTCTCCAGCACAAGGAGTTCAGACAGGGAAAAGTGTATCTGGAGTGAGTAAAAATAGCAGTCATGTGGATGACCAGTCTCATAGAGTTAAGCCTTCGAATAAGGAAAATAGTGACAGCGACA
CTGAAAGTAATGTTGGTGACAAACAAGAGCCAGAGCCTGTTCAAAAATTCCAGCCCTCCAGAAGGCTTAGTGTTCAAGACCGCATCAACCTCTTTGAAAGCAAGCAGAAGGAACAACAACGAGACTCAAGTGATGGCATCAAAAAATTGGAAGGAGAGAAATAAAAAAATCATTTGAAAGTGGCAAATCCAGTGCCATAA
CTGAGAAGGTTGTTTTTAGGAGATGGAGTGGAGCTAGTGACACAGGTATGAAGGTCTCAGCACTCAAGCAAGCAAAGGATGGCAGTCAAAATCAAAGTACTTTTGTGCCATCATCTGGGAGCAAGTCGGATGTGGAAACCTCTTCATCTCAAAGCATAGGTCAGTCATCACAGATTGTAGTGGGAAATCAAAGTTCAGCT
GAGGACACTCCTCAGAGTGAGTTTAGACTACTAGATAATACTTATCAAGGTGCCAATGAAAAGAAAGATGAAGGTTTGACTCCCCTTGCTCAGCACACTGATAAAACTGATGAACTTTGTGTCTCATCCTGCAATGGACAAATTTCGAATACAGATCAAGATTTGCCAGTAGTTATGCAAATGAATAATATGAGAGTAAG
CAAGAAAGAATTATTACAAACATCTTTGCAAAAATCACAAATGGCTGCTTTTCCTGTCAGGCATGAATCAAAAGCTGCTTATGTTTCTTCACATATGAGAAGTAGGTCTAGTGGATGTGAACCCATCACAACATTTTCTCTTAAAGCCACACAGCCAAAGAGCAGCAATAAGTGGAGGGAGGAGCTTGGGGAAAAAGCTA
ACCAATTGGAGGCTTTATTTGCTGCCCACAAACTCAGAAGCCACTCACAAAGAGCAAGTAAACAAGAGAAAATGCACATGGCTCGAAAGGAAAAGAGTCTAGGAGTTGAACCTGACAATCTGCTCACCATGCCTGTGCAGAATATAGGGAGAGAATCACTTGGTAGCTCATCGAGCAATGGAGTGGATTCTGATATGCAA
GCCTTGATGAACATGGTTGATGTCAATCATGTCAACAACTGCTGTCAAGAGAAATTGTTGTGCTTTGCTAATGATCAGGAGTTTAGAGGCAAATTCTATGATCAGTATAATGAGAAACGCGATGCAAAGCTAAGGGATGAGAAAACTACAAAACGGGCAGAGAAAGAAGCTAACTTAAAGGCTATGCAAGAAGTCTTAGA
GCAAAGACAAGCTGAAATGGCAGCAACGAGTGCAACTAAAAATGATCCTCTTGGCTGTTCAGAGGACATGCCAAAGGACCTGCCAAAGGCAAATGGATCAAGGAAATTCTCATCAAAAACCATGCCAGCAAGGAGTTCTTTATCCCTGACATCTTTATCGCCAAGGATCATCTTACCTGGTAAAGTTTCAAGTTCCACTA
ATACATCTTCAAGTAGGCATAGGAATCAGCCAGAAAATCCTTTGGTTCAGTCAGTTCCCAACTTTACGGATCTTAGGAAAGAGAATACAAAGCCCTCACTTGGCAGAGGCACCTCAAATTCATCAGTGCTTGGTAAAGGCCCTAAGTCTCAAGGAGGGCTCAAAAACAACACAAAAACTGTTGGTGGAAGGGAGCCTTTT
CAAGACACTATTACTACTGGTTCTGGTTCAACTGCACGAATTGCCAACAGTAAAGAAGAGAAAAATGGCCCTAGTCAAGCAGCATTGAGGAAAAGTACATATGCGTCTCTTATGAGTGAGGCTAGTGAAAAAGTTCCAAAAGGAGCAGCATTGGAACCAAACAACTGCAGCAAACTGACCAGCAAAAGCAGCCCTGCCAC
CTTGGAAGCTAAACCTTTTCTTCGCAAAGGAAGAGGAATAGGTCCAGGTGCAGGACCAGGAATTGCCAAGCTGAAACAATTTCTTGCAGCAGAGGATGGCTTGAAGAGTGCCGAGGAAGGTCAAGTCAGTGATCAAAATGGTGGAGAAACTGTGGAAGAACTGGTAAATATATCACAACTACTGTGTACTCGTGAAGGAG
CAGAAGCAGAAGCAGCAGAGGAAGAAGAACGTGACAAGCTGACAAGTGATGATAATGAAAGATCAGATAATCATGATGATTCAGAGACATCACAAACTGACATGCAAGGTGATCGTGCCAGTGCTTCTGTCTCTCCCCTTGAAATGCCATCCTCTCCTACAGCTACAAATAATGAATATTATGAATGTAATGAAAAAATG
GCTTGCAATGCAGAAGCTTCAATGACAGgtacaacatcatcatgctgcatcacatcccttccacatgaacatgcaactacttctgtctcatcagttcctaagtcactctctttgcacatgtccattgtatcagATCATGTTAGTACATCTGCAGCAGTGGCCATGCAAACTGACTCTACATTAGGAAGTGCTGCATCATG
GAATTCACACATGCAATATCCTCATTCTCAGATGTCAGAGGCTTCTGAAATCGATACTGGTGTTCGACCTCGTAAAAAATGGGCACCGGCACAAAAGATAGTTCTTGCTACTGCTCTTCAGCA