NA ----> NA
Intron 1 GTAAATTAGC ... CAATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40 | 3 | 0 | 4 |
| A2 | 0 | 1 | 0 | 0 |
| A3 | 33.33 | 1 | 1 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 60 | 2 | 4 | 2 |
| A6 | 31.03 | 10 | 5 | 4 |
| A7 | 33.33 | 16 | 5 | 11 |
| A8 | 44 | 7 | 5 | 6 |
| A9 | 26.32 | 7 | 2 | 3 |
| A10 | 23.81 | 8 | 4 | 1 |
>TRINITY_DN41100_c1_g3_i3 from sample A6 / Example spliced isoformATTGTTTTCAACATGCCGCACTCGCAATCGTGGCCCGCACCATTCCATTTCCAAGTTTTGCAACTTCCAAACAAACCCTCATCCGGGTCCGCCTTTGAGAGTCCGCACTGCTCAGCCTGTAGCCTTTCAGGTCGCTCGCTACCACTGTTCCACTGGACTCTGGAGTCCCCCTCGCCATGGGCCGCAACCCGCAGTAGCAC
AATTCAAAATATCCGAGGGTCCGAGACTCCGACGAATCACGATTTTCAAGCCACGCTGCCACAGGACCATGGTACAAATGTGACAGGCCTGAGTCGTTGACGTTCGTAAGTTGCAAGCAACACCTGGTTCGAGGCCCCTATCATAGCCAGCCCCCGAGTCTGATTGTCCTCATTTCTAATTTTGTTGCTTAATCAACTGC
TTCTTTGACTCAAGGATTTGTGTCTGTATCTGGACCTGAATCTGCTGCGGGTGAAATTGCTTGATTTGGCGCAGATTCATTCAAGTAAGCTTTGCAGGGGAATTGCGGGCATCCTATATCCTCCCATTACTCTGAAAACACTCATAATCATATCGTCATAGACTCGTAGATGGCAATCATGGCAACTCTGAGTCTAGCCT
GTAGCACTAGGGATTTTTAACCTAGATTCCTGGATTCAATTAGGGTTCAACACTCTGAAACCCTCCGAGGATACAGGGGACGAAGTGGAATTGCAAATTTACAACAACCACAGTGAGCCGGCTGCCACTCAAACTGCATTGTGCAGTCTTCCAAAGTCACCTCTAGGTCCTAGTGGCCACCAGAGTTGGAATTTGCTTTA
TATTGTTTGATGTTGGTTCAAGTTGTTCAACAATACCAATTCTTGTCGATTCTGCTAGTTCCAATTTCCAACTTCCGGCCTTGGCTTCTTGGTTGAATCCATATTACCCATCGTAGATTTGTAATCGATCAGTGTTCCCCTGGGGCCTAAGGTTTTAGGTCGCAACTTGCAATGGTGTAAACAATGATGCTCAGTGCTAG
TGCAAGCCTGCAATTTGGGATTCTGGGAGATTGGGACATGGACTCATAGAGCCTGAGCAGTGAGAGATCTCTTCTTTATCGACTGGTAACAACAAAGCAACATATAACACTGGAGTTGCTGCTCGCAATGGCAACAATGTCGCGGGTTCGAGTTTGGGCTGGGCCGTTTATCCATTAGGTTGAGAACATGCATCTCGAGC
GCTGCTTTTATGTTCCGTGCCTGCTGAATTGAGCGAAGAGGATTTGAGGCGCGAATTGGAGGTCTGGGTCCTGTTTCGTGCATTGGATTTGGATAGAAGACGAGAAGGGCTTGTCACGACTCTTTATTATGATCTCAGGCTTGACGGAAATCCAGGAGCAACGTTTGATGCAACAAGGCAGATTGCAGCAGCACTACAAT
AGACTCCTTCATAGGAAAACAGAAAAGAGAGATGGAGATGAGAATGACCACGGCGATGACCCCGATCGAATCCCCACCACCACTGGTATTATCACGAGGACCTGTAGGAGGAAAGGCAAATGGAAACGTAGCTGAGCGCTTGTCGTGTCGGGGTGAAAAGGCTACAGATTGTTACTCTGCTAAACAAGCGAATTTTTGCG
GATTCCAATTCAGAATTGAAATGATATAATTTTATAATTTTTCAGTGAACAGTCAGTGGACAGGGGGCGGACAACGAAAGCTTCACAGGGACCGTCCCCTTAAATAATGCCTTCGACGTAATTAAAGCAGAATCGCAATTCTAATAATATGTGATATGGTTAATTGGTTTAACTATATTGAAATGTAAAGTGTGAAGTAA
TTATTTCTTCAAATTTTGTTATAAATATTAGTTAGTGGTTTATCTATCTTTTGGAAGTGGAATTGTCTACTTAAGCATAAATATTTTATTTGAGCATCTCTAGAAAATAAAATTTTAACTTGAGTAG
>TRINITY_DN41100_c1_g3_i4 from sample A6 / Example unspliced isoform:ATTGTTTTCAACATGCCGCACTCGCAATCGTGGCCCGCACCATTCCATTTCCAAGTTTTGCAACTTCCAAACAAACCCTCATCCGGGTCCGCCTTTGAGAGTCCGCACTGCTCAGCCTGTAGCCTTTCAGGTCGCTCGCTACCACTGTTCCACTGGACTCTGGAGTCCCCCTCGCCATGGGCCGCAACCCGCAGTAGCAC
AATTCAAAATATCCGAGGGTCCGAGACTCCGACGAATCACGATTTTCAAGCCACGCTGCCACAGGACCATGGTACAAATGTGACAGGCCTGAGTCGTTGACGTTCGTAAGTTGCAAGCAACACCTGGTTCGAGGCCCCTATCATAGCCAGCCCCCGAGTCTGATTGTCCTCATTTCTAATTTTGTTGCTTAATCAACTGC
TTCTTTGACTCAAGGATTTGTGTCTGTATCTGGACCTGAATCTGCTGCGGGTGAAATTGCTTGATTTGGCGCAGATTCATTCAAGTAAGgtaaattagcttttaaaccgtctcttttcatgtcagtttgtctacttctaagttccacctatgctatgccttccttcgtttcgggattccgatctggaattgggatttgaa
gctggccgtggaagcctcaacctgaaggattattgcaatttgcagCTTTGCAGGGGAATTGCGGGCATCCTATATCCTCCCATTACTCTGAAAACACTCATAATCATATCGTCATAGACTCGTAGATGGCAATCATGGCAACTCTGAGTCTAGCCTGTAGCACTAGGGATTTTTAACCTAGATTCCTGGATTCAATTAGG
GTTCAACACTCTGAAACCCTCCGAGGATACAGGGGACGAAGTGGAATTGCAAATTTACAACAACCACAGTGAGCCGGCTGCCACTCAAACTGCATTGTGCAGTCTTCCAAAGTCACCTCTAGGTCCTAGTGGCCACCAGAGTTGGAATTTGCTTTATATTGTTTGATGTTGGTTCAAGTTGTTCAACAATACCAATTCTT
GTCGATTCTGCTAGTTCCAATTTCCAACTTCCGGCCTTGGCTTCTTGGTTGAATCCATATTACCCATCGTAGATTTGTAATCGATCAGTGTTCCCCTGGGGCCTAAGGTTTTAGGTCGCAACTTGCAATGGTGTAAACAATGATGCTCAGTGCTAGTGCAAGCCTGCAATTTGGGATTCTGGGAGATTGGGACATGGACT
CATAGAGCCTGAGCAGTGAGAGATCTCTTCTTTATCGACTGGTAACAACAAAGCAACATATAACACTGGAGTTGCTGCTCGCAATGGCAACAATGTCGCGGGTTCGAGTTTGGGCTGGGCCGTTTATCCATTAGGTTGAGAACATGCATCTCGAGCGCTGCTTTTATGTTCCGTGCCTGCTGAATTGAGCGAAGAGGATT
TGAGGCGCGAATTGGAGGTCTGGGTCCTGTTTCGTGCATTGGATTTGGATAGAAGACGAGAAGGGCTTGTCACGACTCTTTATTATGATCTCAGGCTTGACGGAAATCCAGGAGCAACGTTTGATGCAACAAGGCAGATTGCAGCAGCACTACAATAGACTCCTTCATAGGAAAACAGAAAAGAGAGATGGAGATGAGAA
TGACCACGGCGATGACCCCGATCGAATCCCCACCACCACTGGTATTATCACGAGGACCTGTAGGAGGAAAGGCAAATGGAAACGTAGCTGAGCGCTTGTCGTGTCGGGGTGAAAAGGCTACAGATTGTTACTCTGCTAAACAAGCGAATTTTTGCGGATTCCAATTCAGAATTGAAATGATATAATTTTATAATTTTTCA
GTGAACAGTCAGTGGACAGGGGGCGGACAACGAAAGCTTCACAGGGACCGTCCCCTTAAATAATGCCTTCGACGTAATTAAAGCAGAATCGCAATTCTAATAATATGTGATATGGTTAATTGGTTTAACTATATTGAAATGTAAAGTGTGAAGTAATTATTTCTTCAAATTTTGTTATAAATATTAGTTAGTGGTTTATC
TATCTTTTGGAAGTGGAATTGTCTACTTAAGCATAAATATTTTATTTGAGCATCTCTAGAAAATAAAATTTTAACTTGAGTAG