NA ----> NA
Intron 1 GCAAGCAATC ... CTTCCCAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68 | 8 | 23 | 11 |
| A2 | 63.64 | 6 | 17 | 4 |
| A3 | 48.94 | 12 | 18 | 5 |
| A4 | 84.21 | 3 | 15 | 17 |
| A5 | 100 | 0 | 12 | 7 |
| A6 | 85.71 | 1 | 7 | 5 |
| A7 | 71.43 | 10 | 29 | 21 |
| A8 | 47.83 | 6 | 7 | 4 |
| A9 | 82.86 | 3 | 16 | 13 |
| A10 | 57.69 | 11 | 18 | 12 |
>TRINITY_DN86289_c0_g1_i1 from sample A3 / Example spliced isoformATCAAGTAAATCACTTCCGGAGAAAGTGAGAATGCGAAGAGAGGCGGGCGTCTAGAGTTCGAAACAAATAGACAGAGCAGACGACCGTAGCTGTAGCTACGCACAAGTTGGGTTTTGAAAATTAGAGCCGAGCCCGCTCATCATTGGCATTGGCATTGCGAGTCAGCAATGGAAGGGGTATGTGAGTGGGTTCATCCAGA
CATAGAGTTAAAAGATGTGCTAGTCTGTGTGCGGGCATTTGTTGATATATTGATTTTGACTGCTGGTTATCAATCATCTGGCGAGTCCGCTTCCTGGGATCCAGAAAACATCACCAAAGCTATACAGTGGGCTGTTTTCTTCGAAAATGTCTTGGAGAAGATTCCTGCATCATCAGAAGGGCCTGCCTCAGTTGTCATTT
TCAACTCTTGCAGAGTCCAGAAAAATGCTTTTGGGGAGTCTACTACAGGCAGTCAAACTTACAGATAATCAACTTACTGCTGTATTCACCGTAGTTGGTGAAATGGATACTAATAATTATAGTGATAATTCCAAGCCAGCCGTGCTTTCTGATGAAGATTGCAGATCTGTAGGAAATGAATTGAAAATAGCCAAACAGGC
TGGTGATTCAATTTCTATTCACAATAAAAGTAGTAATTTCAAAGAGGACGAAGTCTTTGTTTTGCCCAGTTCTAGTGCATTGGGGAAAGAAACTGTGGATGAAACTCAAAACGCCCAGGGAGAGTCTAAACAAAATGAATTTGGTTTTGAATCAGTTTATCATGTTGGGAGGGTAGGGGCTAAGAATAACTCCAGCAACC
AACTCACAAATTATGTAATTCAAGAAATTATAAAGAGACATGCTGCAAGTGCTCGCATTACATCACTTCAGAAAGGATTAAAGGTGCTGTCTGACTCAGTCTTGCAAAAGAAACTTGAGGCTGAGAATCACATATGGAAAGATGCCTCCAGCTCTGTAAGTGCTTCAAGGTAAATCTGGCAGGTTGGTATTCATCATGAA
AGATGTATGCATAGCTGTGTTGTAACTTTATATGCAC
>TRINITY_DN86289_c0_g1_i2 from sample A3 / Example unspliced isoform:ATCAAGTAAATCACTTCCGGAGAAAGTGAGAATGCGAAGAGAGGCGGGCGTCTAGAGTTCGAAACAAATAGACAGAGCAGACGACCGTAGCTGTAGCTACGCACAAGTTGGGTTTTGAAAATTAGAGCCGAGCCCGCTCATCATTGGCATTGGCATTGCGAGTCAGCAATGGAAGGGGTATGTGAGTGGGTTCATCCAGA
CATAGAGTTAAAAGATGTGCTAGTCTGTGTGCGGGCATTTGTTGATATATTGATTTTGACTGCTGGTTATCAATCATCTGGCGAGTCCGCTTCCTGGGATCCAGAAAACATCACCAAAGCTATACAGTGGGCTGTTTTCTTCGAAAATGTCTTGGAGAAGATTCCTGCATCATCAGAAGgcaagcaatccaagcgagcac
ttgacctggctctatctcaactgacatctgaccctctcttcccaaagGGCCTGCCTCAGTTGTCATTTTCAACTCTTGCAGAGTCCAGAAAAATGCTTTTGGGGAGTCTACTACAGGCAGTCAAACTTACAGATAATCAACTTACTGCTGTATTCACCGTAGTTGGTGAAATGGATACTAATAATTATAGTGATAATTCC
AAGCCAGCCGTGCTTTCTGATGAAGATTGCAGATCTGTAGGAAATGAATTGAAAATAGCCAAACAGGCTGGTGATTCAATTTCTATTCACAATAAAAGTAGTAATTTCAAAGAGGACGAAGTCTTTGTTTTGCCCAGTTCTAGTGCATTGGGGAAAGAAACTGTGGATGAAACTCAAAACGCCCAGGGAGAGTCTAAACA
AAATGAATTTGGTTTTGAATCAGTTTATCATGTTGGGAGGGTAGGGGCTAAGAATAACTCCAGCAACCAACTCACAAATTATGTAATTCAAGAAATTATAAAGAGACATGCTGCAAGTGCTCGCATTACATCACTTCAGAAAGGATTAAAGGTGCTGTCTGACTCAGTCTTGCAAAAGAAACTTGAGGCTGAGAATCACA
TATGGAAAGATGCCTCCAGCTCTGTAAGTGCTTCAAGGTAAATCTGGCAGGTTGGTATTCATCATGAAAGATGTATGCATAGCTGTGTTGTAACTTTATATGCAC