NA ----> NA

Intron 1 GTAAGTTGGT ... CTGTTTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	47.47	26	26	21
A2	30.77	18	10	6
A3	46.67	12	10	11
A4	26.67	11	4	4
A5	35.29	11	5	7
A6	39.94	94	51	74
A7	33.61	80	34	47
A8	31.97	83	35	43
A9	34.9	97	45	59
A10	37.5	60	34	38

>TRINITY_DN44238_c0_g4_i2 from sample A8 / Example spliced isoform

AAAGATAGTTAATGAATCAGAAGTTTGTGCAAAATATTTATGTTGAAGGAAGGATAATCAGTAGTGACTATTGTTTGAAGCAAGTGGACCGAAAGGCGACGCTGGTAATTGAGAAGGGCGCATTCCCTGTCAAGAAGGGATATACACCAGCCTCATCTTCAGGTCTGAAGTTTGGAGAAGAATACTGCCGGTATAAAATA
TTATCTCTGCAGCTGTCCAAGAAAAGGGGTCGCAGTCTCTCCTTTTTACGAGTGAACTTGTGGTCTGTGGAAGAAGGGGAAGTTTACATCAGTTTATTGCATAGTCGTGGCTGTTAGTTGGGTGCACTGTCGTTTGAGAAGGGCGCGGCCTTGAAACTTCTCATTTGGGAGGTCGAATCTCTCCGTAATTACCCATTTAC
AGATACAAAAGGGGCGTGTCCAGGCCTTAAGGAGGGCGAATCCACTGTAGGTAAAGTTGTTGCTGATTAGTAGTATTTCTAGCTTCAGGAGATCGCACCAGACTGCCGCACATCACTTATTCATGTATCAGCCATCTCTTCCACGTTTTTGACTGCTGGTCCAGACATCAAGCTTGCAAATCGAGTTCCACAGTGGCTGC
TAATTATCACTAAATCGTGGCCTTCAAAGGGAGCCTTAACTCCGCATCATGGCCAGGTCACATGTAGATGATTATTTATTTTGCAATCTCTGTGGGAGCCTTCTATATTTTGATAATCCATTATTTGCATCTTGCCCTTTGTGTCATAATCAACACAATGTTAAAGATATTCGAGGGAAAGA

>TRINITY_DN44238_c0_g4_i1 from sample A8 / Example unspliced isoform:

AAAGATAGTTAATGAATCAGAAGTTTGTGCAAAATATTTATGTTGAAGGAAGGATAATCAGTAGTGACTATTGTTTGAAGCAAGTGGACCGAAAGGCGACGCTGGTAATTGAGAAGGGCGCATTCCCTGTCAAGAAGGGATATACACCAGCCTCATCTTCAGGTCTGAAGTTTGGAGAAGAATACTGCCGGTATAAAATA
TTATCTCTGCAGCTGTCCAAGAAAAGGGGTCGCAGTCTCTCCTTTTTACGAGTGAACTTGTGGTCTGTGGAAGAAGGGGAAGTTTACATCAGTTTATTGCATAGTCGTGGCTGTTAGTTGGGTGCACTGTCGTTTGAGAAGGGCGCGGCCTTGAAACTTCTCATTTGGGAGGTCGAATCTCTCCGTAATTACCCATTTAC
AGATACAAAAGGGGCGTGTCCAGGCCTTAAGGAGGGCGAATCCACTGTAGGTAAAGTTGTTGCTGATTAGTAGTATTTCTAGCTTCAGGAGATCGCACCAGACTGCCGCACATCACTTATTCATGTATCAGCCATCTCTTCCACGTTTTTGACTGCTGGTCCAGACATCAAGCTTGCAAATCGAGTTCCACAGTGGCTGC
TAATTATCACTAAATCGTGGCCTTCAAAGGGAgtaagttggtcattaaaggccgaccgtcaaactctgtttacagGCCTTAACTCCGCATCATGGCCAGGTCACATGTAGATGATTATTTATTTTGCAATCTCTGTGGGAGCCTTCTATATTTTGATAATCCATTATTTGCATCTTGCCCTTTGTGTCATAATCAACACA
ATGTTAAAGATATTCGAGGGAAAGA