NA ----> NA
Intron 1 GTAGGTTTTC ... TATTTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 86.67 | 2 | 6 | 20 |
| A2 | 50 | 3 | 4 | 2 |
| A3 | 81.82 | 1 | 0 | 9 |
| A4 | 50 | 1 | 2 | 0 |
| A5 | 100 | 0 | 0 | 6 |
| A6 | 26.32 | 7 | 2 | 3 |
| A7 | 54.55 | 5 | 5 | 7 |
| A8 | 48.84 | 11 | 10 | 11 |
| A9 | 56.1 | 9 | 9 | 14 |
| A10 | 46.15 | 7 | 9 | 3 |
>TRINITY_DN41878_c0_g1_i1 from sample A6 / Example spliced isoformAACAAGGTAAAGGATCTCCAAAATGAGATTTCCATAATGGCAAATAAGCAAAAGGAATCAAAAGGGGTCATAGATAGCCTGCTTCAATCAAAAGACAAGTTGACAAATGATTTAAAGGCATCAAATTATGAACTGAAGCGTGATATTGATATGAAAGAACGTGAGCTTGCAATTTTAAAGGGAAAGTTGAGTAGGAACTT
GGCATTGCTTGAGGCAGTAGAAAGGGAAGTTGTTTGTGTGAAACTTGCTATAGATGAAACCCACCAGATTCTCCAGGGTAAAGAAGATAAAGTGCTTGGGTTGAAGCAAAAGCTAGATAAGATCATGGGATATGAGAAGTTATTTATTGAAAAAATACATCTGTTGGAAAATCTGATGGAGGAGAAACAGATTGAATTCT
CAAAAAAGGATACGGTTATTGCAGACCTGAAAGATAGATTGGAATACATGATGAATGATCGTAAGCTTCAACTACAAATTGAAGAACTTCAGAAGCTTGTTGAAGTCAAAGAAGACGCTATACAAAATCTTATTTTGGAAAAAGAGGTACAAAGTTTAGAATTAGTTTTGTCCAAGTTCCAGGATCTGCAAATGGAAACA
TCTCCGAATAGGTTATTGGAATCACAAGAAGTGGATTATGCTCTCCAAAAGCAGATACCAAAAGCTGAAGAAACACTTCTCCAACAGAACCAAGAGGAATGTAAGAGGTATAGTCCCAGATAGCATGCAGGAAAGGGTGACTTCTCCACTTGTTTGTACGCATTTGACTTCATTACCTGCTTTAGAAGTGAAAATGCAGT
GCGCCACTGAAATGGACAACAGCTTCACTGCTGAGAAGAAGAAATTTAACTGCAATTTCAGTGGTATTGAAACCAAGATTACTGAATCATCTCGGTATGTACAAGAGGATTGTGATGATAATTCTCCAACGTCTAAAGTAATTCCATTACCGACTAAGTGCACCCCTAAGAACCCTTCATATCGTGATATGGTCAAATGT
GTTAAATGTGAGCAGCTATTTTATGAAATCCGTTTGAACGTGGAGAGAAATGGTTTAGATGAAGTACGTTTGACAAATTTTAACTATACATGTCAGAACTGCAAAAATGAGCATGGCAAGAAGCGGAGAAAGCTCGGATTCCTTACACCAGAGTTGGCATCTGAAAGAGATGGTTGACAAACACAGTAAGAATTTGATGA
AACTCAAACGCATCTCAGGCTGTTAGACATGAAGTCGTCTGTAGAATCCACATGAGAGAATAGGTTGGTATGTACTCAAGTATAGAAGATGTAGAAGATCTCTTTCAAGTAAAAGATCTGACTTACGATGCTATCCAGTAAATCCATTATAATCAATTTTACAGAAGCATGCATTTTGTTAAAAATTGCGTATTATTGTT
CTTATGTCACATTTCTATTTGCATTCAGACTGCAAGGCAGGTAGGCCGTTTTGCATGGTTTTTAATCGTGCTAAGGTTGAATTTACGTTTCCCCTTCTTTCTCACTTAACTATCTAGCTGTCCCTGCTCATGAAGTGCAAAATTCCACTATTCTCAGGACTCCAGTCATTGTATTTCTAAATTGTCT
>TRINITY_DN41878_c0_g1_i14 from sample A6 / Example unspliced isoform:AACAAGGTAAAGGATCTCCAAAATGAGATTTCCATAATGGCAAATAAGCAAAAGGAATCAAAAGGGGTCATAGATAGCCTGCTTCAATCAAAAGACAAGTTGACAAATGATTTAAAGGCATCAAATTATGAACTGAAGCGTGATATTGATATGAAAGAACGTGAGCTTGCAATTTTAAAGGGAAAGTTGAGTAGGAACTT
GGCATTGCTTGAGGCAGTAGAAAGGGAAGTTGTTTGTGTGAAACTTGCTATAGATGAAACCCACCAGATTCTCCAGGGTAAAGAAGATAAAGTGCTTGGGTTGAAGCAAAAGCTAGATAAGATCATGGGATATGAGAAGTTATTTATTGACCTGAAAGATAGATTGGAATACATGATGAATGATCGTAAGCTTCAACTAC
AAATTGAAGAACTTCAGAAGCTTGTTGAAGTCAAAGAAGACGCTATACAAAATCTTATTTTGGAAAAAGAGGTACAAAGTTTAGAATTAGTTTTGTCCAAGTTCCAGGATCTGCAAATGGAAACATCTCCGAATAGGTTATTGGAATCACAAGAAGTGGTGGATTATGCTCTCCAAAAGCAGATACCAAAAgtaggtttt
cacttcatagaatccattttggatgttcaggtaatagtatattagtgagatggtttttaggaggaagaatgacaatgcatatagctaatgtgcaagaaagataatagacgtactaattttgattttggagagaattttaaactttttttgtattagaattttagatacatttgtttttatcaaatttaaatcgatccatg
ctattttgtagGCTGAAGAAACACTTCTCCAACAGAACCAAGAGGAATGTAAGAGGTATACTCCCAGATAGCATGCAGGAAAGGGTGACTTCTCCACTTGTTTGTACGCATTTGACTTCATTACCTGCTTTAGAAGTGAAAATGCAGTGCGCCACTGAAATGGACAACAGCTTCACTGCTGAGAAGAAGAAATTTAACTG
CAATTTCAGTGGTATTGAAACCAAGATTACTGAATCATCTCGGTATGTACAAGAGGATTGTGATGATAATTCTCCAACGTCTAAAGTAATTCCATTACCGACTAAGTGCACCCCTAAGAACCCTTCATATCGTGATATGGTCAAATGTGTTAAATGTGAGCAGCTATTTTATGAAATCCGTTTGAACGTGGAGAGAAATG
GTTTAGATGAAGTACGTTTGACAAATTTTAACTATACATGTCAGAACTGCAAAAATGAGCATGGCAAGAAGCGGAGAAAGCTCGGATTCCTTACACCAGAGTTGGCATCTGAAAGAGATGGTTGACAAACACAGTAAGAATTTGATGAAACTCAAACGCATCTCAGGCTGTTAGACATGAAGTCGTCTGTAGAATCCACA
TGAGAGAATAGGTTGGTATGTACTCAAGTATAGAAGATGTAGAAGATCTCTTTCAAGTAAAAGATCTGACTTACGATGCTATCCAGTAAATCCATTATAATCAATTTTACAGAAGCATGCATTTTGTTAAAAATTGCGTATTATTGTTCTTATGTCACATTTCTATTTGCATTCAGACTGCAAGGCAGGTAGGCCGTTTT
GCATGGTTTTTAATCGTGCTAAGGTTGAATTTACGTTTCCCCTTCTTTCTCACTTAACTATCTAGCTGTCCCTGCTCATGAAGTGCAAAATTCCACTATTCTCAGGACTCCAGTCATTGTATTTCTAAATTGTCT