sp|Q9ZPQ8|ACR5_ARATH ----> ACT domain-containing protein ACR5

Intron 1 GTGGTTTCAA ... CGTTAAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	4	7
A2	75	2	6	6
A3	75	1	3	3
A4	77.78	2	7	7
A5	50	2	1	3
A6	67.74	10	16	26
A7	70.11	13	28	33
A8	73.33	12	27	39
A9	69.01	11	27	22
A10	74.68	10	32	27

>TRINITY_DN44334_c2_g2_i1 from sample A6 / Example spliced isoform

GCCGGGTCGCCCATGGGTTGAGTATTTCCAATATTGTCGCCCATGGATTGCGTGGTCCTGAAGTTACGGGGCCTGCCGTTCCAGGTTTGGGAGACAGGTCCCTACAGGTGCTCCCATGGAAGACCGGCAGAAGATTTGTAAAACTGAAAACTCTTGCTAAATGTAATGAGTGGAAACAACAACACCCCAGTGCTAAAACG
ACGGTGTCAATGGAATTCACTCACACAGAGAGGAGTCTGCATCAATTGATGTTTGATGACTGCAATTATGAGAAACTGGGCGAAACTGGAGGCAGCCCACCTCCTCGTCTCAGCGACAATGGCAACACCAAGCCTCTTGTGACTGTCAATGTAAGGAGGGCCTAAGTCTTCTCTTGGATAATGTTTGCACCTTGATGGAT
ATGGATTATGTTGTCTTTCATGCCACTATAGAATCTCAAGGCCCACAAACTTTTCAGAGAGGCAGCGTGTGATTCAGTGCTTGGAGGTTGCCATTAGAAAAGAGAATCAGAGGGCATGAGATTGGAACTCTGCACCAGCTATCGAGTTGGGCTTCTGTCGGACGTGACTCGCATATTTAGAATGGGATGTCAGTTACCAG
AGCAGAGGTGTCAATGCGTGATGATAAGGCAGCTAATGTGCTCTACAGATGGAAACCCTATTGATACCATATTACCAAGACTATAGAGGATATTCGCCAAGAAATTGGATTAACAATCTTGCAAGTAAAAGACAACTGCATGCATGCATACAGAATCTTCTCCGAGGGAACCTGCCATTCGATTCTCCCTGGGCAGCCTC
TTGAAATTAAAGTCAGTGTTTTCTCTACCATCTTGGATCGATAAAATCCTATTCTTAAATGATGTACTTAGTGCACAGGCATAAATAAATCAACAGATCTTTGATTTCTG

>TRINITY_DN44334_c2_g2_i2 from sample A6 / Example unspliced isoform:

GCCGGGTCGCCCATGGGTTGAGTATTTCCAATATTGTCGCCCATGGATTGCGTGGTCCTGAAGTTACGGGGCCTGCCGTTCCAGGTTTGGGAGACAGGTCCCTACAGGTGCTCCCATGGAAGACCGGCAGAAGATTTGTAAAACTGAAAACTCTTGCTAAATGTAATGAGTGGAAACAACAACACCCCAGTGCTAAAACG
ACGGTGTCAATGGAATTCACTCACACAGAGAGGAGTCTGCATCAATTGATGTTTGATGACTGCAATTATGAGAAACTGGGCGAAACTGGAGGCAGCCCACCTCCTCGTCTCAGCGACAATGGCAACACCAAGCCTCTTGTGACTGTCAATGTAAGGAGGGCCTAAGTCTTCTCTTGGATAATGTTTGCACCTTGATGGAT
ATGGATTATGTTGTCTTTCATGCCACTATAGAATCTCAAGGCCCACAAACTTTTCAGgtggtttcaagtcacatcgccaaatgcagactaattttaattacgttaagcagAGAGGCAGCGTGTGATTCAGTGCTTGGAGGTTGCCATTAGAAAAGAGAATCAGAGGGCATGAGATTGGAACTCTGCACCAGCTATCGAGT
TGGGCTTCTGTCGGACGTGACTCGCATATTTAGAATGGGATGTCAGTTACCAGAGCAGAGGTGTCAATGCGTGATGATAAGGCAGCTAATGTGCTCTACAGATGGAAACCCTATTGATACCATATTACCAAGACTATAGAGGATATTCGCCAAGAAATTGGATTAACAATCTTGCAAGTAAAAGACAACTGCATGCATGC
ATACAGAATCTTCTCCGAGGGAACCTGCCATTCGATTCTCCCTGGGCAGCCTCTTGAAATTAAAGTCAGTGTTTTCTCTACCATCTTGGATCGATAAAATCCTATTCTTAAATGATGTACTTAGTGCACAGGCATAAATAAATCAACAGATCTTTGATTTCTG

Intron 2 GCAACACCAA ... TTTCAGAGAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	12.5	7	2	0
A2	14.29	6	0	2
A3	33.33	3	3	0
A4	41.67	7	8	2
A5	33.33	3	1	2
A6	23.53	26	7	9
A7	25.58	32	8	14
A8	22.45	38	8	14
A9	37.31	21	15	10
A10	25	27	8	10

>TRINITY_DN48172_c0_g1_i1 from sample A10 / Example spliced isoform

CATGGGTTGAGTATTTCCAATATTGTCGCCCATGGATTGCGTGGTCCTGAAGTTACGGGGCCTGCCGTTCCAGGTTTGGGAGACAGGTCCCTACAGGTGCTCCCATGGAAGACCGGCAGAAGATTTGTAAAACTGAAAACTCTTGCTAAATGTAATGAGTGGAAACAACAACACCCCAGTGCTAAAACGACGGTGTCAAT
GGAATTCACTCACACAGAGAGGAGTCTGCATCAATTGATGTTTGATGACTGCAATTATGAGAAACTGGGCGAAACTGGAGGCAGCCCACCTCCTCGTCTCAGCGACAATGGCAACACCAAGCCTCTTGTGACTGTCAATGTAAGGAGGGCCTAAGTCTTCTCTTGGATAATGTTTGCACCTTGATGGATATGGATTATGT
TGTCTTTCATGCCACTATAGAATCTCAAGGCCCACAAACTTTTCAGGTGGTTTCAAGTCACATCGCCAAATGCAGACTAATTTTAATTACGTTAAGCAGAGAGGCAGCGTGTGATTCAGTGCTTGGAGGTTGCCATTAGAAAAGAGAATCAGAGGGCATGAGATTGGAACTCTGCACCAGCTATCGAGTTGGGCTTCTGT
CGGACGTGACTCGCATATTTAGAATGGGATGTCAGTTACCAGAGCAGAGGTGTCAATGCGTGATGATAAGGCAGCTAATGTGCTCTACAGATGGAAACCCTATTGATACCATATTACCAAGACTATAGAGGATATTCGCCAAGAAATTGGATTAACAATCTTGCAAGTAAAAGACAACTGCATGCATGCATACAGAATCT
TCTCCGAGGGAACCTGCCATTCGATTCTCCCTGGGCAGCCTCTTGAAATTAAAGTCAGTGTTTTCTCTACCATCTTGGATCGATAAAATCCTATTCTTAAATGATGTACTTAGTGCACAGGCATAAATAAATCAACAGATCTTTGATTTCTGCTTTTGATTTCTGCTTGCTCCAATATTTTCATTATTTAAAACTTGTCA
AATCTAAA

>TRINITY_DN48172_c0_g1_i2 from sample A10 / Example unspliced isoform:

CATGGGTTGAGTATTTCCAATATTGTCGCCCATGGATTGCGTGGTCCTGAAGTTACGGGGCCTGCCGTTCCAGGTTTGGGAGACAGGTCCCTACAGGTGCTCCCATGGAAGACCGGCAGAAGATTTGTAAAACTGAAAACTCTTGCTAAATGTAATGAGTGGAAACAACAACACCCCAGTGCTAAAACGACGGTGTCAAT
GGAATTCACTCACACAGAGAGGAGTCTGCATCAATTGATGTTTGATGACTGCAATTATGAGAAACTGGGCGAAACTGGAGGCAGCCCACCTCCTCGTCTCAGCGACAATGGCAACACCAAGCCTCTTGTGACTGTCAATGTAAGGAGGGCCTAAGTCTTCTCTTGGATAATGTTTGCACCTTGATGGATATGGATTATGT
TGTCTTTCATGCCACTATAGAATCTCAAGGCCCACAAACTTTTCAGGTGGTTTCAAGTCACATCGCCAAATGCAGACTAATTTTAATTACGTTAAGCAGAGAGgcaacaccaagcctcttgtgactgtcaatgtaaggagggcctaagtcttctcttggataatgtttgcaccttgatggatatggattatgttgtcttt
catgccactatagaatctcaaggcccacaaacttttcagagagGCAGCGTGTGATTCAGTGCTTGGAGGTTGCCATTAGAAAAGAGAATCAGAGGGCATGAGATTGGAACTCTGCACCAGCTATCGAGTTGGGCTTCTGTCGGACGTGACTCGCATATTTAGAATGGGATGTCAGTTACCAGAGCAGAGGTGTCAATGCG
TGATGATAAGGCAGCTAATGTGCTCTACAGATGGAAACCCTATTGATACCATATTACCAAGACTATAGAGGATATTCGCCAAGAAATTGGATTAACAATCTTGCAAGTAAAAGACAACTGCATGCATGCATACAGAATCTTCTCCGAGGGAACCTGCCATTCGATTCTCCCTGGGCAGCCTCTTGAAATTAAAGTCAGTG
TTTTCTCTACCATCTTGGATCGATAAAATCCTATTCTTAAATGATGTACTTAGTGCACAGGCATAAATAAATCAACAGATCTTTGATTTCTGCTTTTGATTTCTGCTTGCTCCAATATTTTCATTATTTAAAACTTGTCAAATCTAAA