sp|Q9LUM3|SBT15_ARATH ----> Subtilisin-like protease SBT1.5

Intron 1 GTCCGGTCTA ... ATTGAATTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	26.09	17	4	8
A2	40	6	4	4
A3	47.06	9	8	8
A4	42.86	6	7	2
A5	42.86	2	1	2
A6	-1	0	0	0
A7	10	9	2	0
A8	18.18	9	3	1
A9	21.74	9	4	1
A10	18.18	9	2	2

>TRINITY_DN42646_c4_g5_i3 from sample A8 / Example spliced isoform

CCCTTTGGTGTACGGGAAATCTGCGTCGATTAATGATCAGACTGCAAATCTCTGCCTGGATGGAAGCCTTGATTCGTGGAAAAATTGTGGTCTGTGATCTTTGGAAAAGTGGCGAGGGCGGAGAAGGGATTGCTCATGCTGCGAGCTGGCGATGCAGGGATGATTCTTTCCAACGGGCCTGAGAACAGAGAGGATTTTTC
GACCGAAAATCATATATTATCAGCAACAAGGGTCGAATCCGGTCGCTCCGGAGACATTAGAGCGTATATTAACAGCATGATTGTCGCTTCTCGTCCAGAGGGTCGAATCTGGTCGCTCCGGAGATCCTTAAGCCGGACCTAGTTGCTCCGGGTATCCACATAGGCTGGTTTGAATTCTGAATGATGCCACTCAAAGCCAA
CCAGACCCCACTCGGCTTTCAGACCTCCCGTGATAGACCCAATTGGTCGGCTTGATGGCTTGGCGGTGATGAAGAAAATTCCCGTCTACATGAAAGGGGATGTTCTTATTGAAGGAACGGAATGTGCGTCTTTCTTGTGGAGTTTCAAGAAAATGTTAATTTAAGAGAAACTACCATTTCCATAGTAATCCGACTAACGA
AGGAGTGCTGAAACCATTGCTCTAATTACGATTCCAAGAACCATTTCCATCATCAGTCGGAATCCGGCGAATGAGAAGTGTTGAAACCATTGCTCAGAACATTCTGAATCCGGCGAATGAAGGATTGCTGAAATCATTGTTCGAATTACGAAGGAATCCGGCGAAAGAAGGATTGCTGAAACCATTGTTCGAATTACAAA
GGAATCCGGCGAAAGAAGTATTGCTAAAACCATTCGAACTAAGGATTGCTGAGCCTCCAATATCAGTCGGA

>TRINITY_DN42646_c4_g5_i1 from sample A8 / Example unspliced isoform:

CCCTTTGGTGTACGGGAAATCTGCGTCGATTAATGATCAGACTGCAAATCTCTGCCTGGATGGAAGCCTTGATTCGTGGAAAAATTGTGGTCTGTGATCTTTGGAAAAGTGGCGAGGGCGGAGAAGGGATTGCTCATGCTGCGAGCTGGCGATGCAGGGATGATTCTTTCCAACGGGCCTGAGAACAGAGAGGATTTTTC
GACCGAAAATCATATATTATCAGCAACAAGGGTCGAATCCGGTCGCTCCGGAGACATTAGAGCGTATATTAACAGCATGATTGTCGCTTCTCGTCCAGAGGGTCGAATCTGGTCGCTCCGGAGATCCTTAAGCCGGACCTAGTTGCTCCGGGTATCCACATAGgtccggtctatttttgtttgaattctgttggtttgaa
ttctgaaaacattattgaattagGCTGGTTTGAATTCTGAATGATGCCACTCAAAGCCAACCAGACCCCACTCGGCTTTCAGACCTCCCGTGATAGACCCAATTGGTCGGCTTGATGGCTTGGCGGTGATGAAGAAAATTCCCGTCTACATGAAAGGGGATGTTCTTATTGAAGGAACGGAATGTGCGTCTTTCTTGTGG
AGTTTCAAGAAAATGTTAATTTAAGAGAAACTACCATTTCCATAGTAATCCGACTAACGAAGGAGTGCTGAAACCATTGCTCTAATTACGATTCCAAGAACCATTTCCATCATCAGTCGGAATCCGGCGAATGAGAAGTGTTGAAACCATTGCTCAGAACATTCTGAATCCGGCGAATGAAGGATTGCTGAAATCATTGT
TCGAATTACGAAGGAATCCGGCGAAAGAAGGATTGCTGAAACCATTGTTCGAATTACAAAGGAATCCGGCGAAAGAAGTATTGCTAAAACCATTCGAACTAAGGATTGCTGAGCCTCCAATATCAGTCGGA

Intron 2 GTCCGGTCTA ... ATTGAATTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	37.04	17	4	16
A2	64.71	6	9	13
A3	53.85	9	9	12
A4	58.62	6	10	7
A5	66.67	2	1	7
A6	100	0	9	32
A7	73.53	9	18	32
A8	71.43	9	15	30
A9	66.04	9	14	21
A10	57.14	9	10	14

>TRINITY_DN108750_c2_g3_i7 from sample A3 / Example spliced isoform

ATTCGTGTGCCGCTCCGAACGGCCGACTCCTTCTGCGATTTCCAATACGCCAGCACCATCGACAGAGAGTTCCCGGCTCCAGTCGTGTTGGGGAACTGCAAAAATTACAAAGGCTCCTCCCTTCACAAAGGCATGACGGCGGGCAACGAACAATTCCCTTTGGTGTACGGGAAATCTGCGTCGATTAATGATCAGACTGC
AAATCTCTGCCTGGATGGAAGCCTTGATTCGTGGAAAAATTGTGGTCTGTGATCTTTGGAAAAGTGGCGAGGGCGGAGAAGGGATTGCTCATGCTGCGAGCTGGCGATGCAGGGATGATTCTTTCCAACGGGCCTGAGAACAGAGAGGATTTTTCGACCGAAAATCATATATTATCAGCAACAAGGGTCGAATCCGGTCG
CTCCGGAGACATTAGAGCGTATATTAACAGCATGATTGTCGCTTCTCGTCCAGAGGGTCGAATCTGGTCGCTCCGGAGATCCTTAAGCCGGACCTAGTTGCTCCGGGTATCCACATAGGCTGGTTTGAATTCTGAATGATGCCACTCAAAGCCAACCAGACCCCACTCGGCTTTCAGACCTCCCGTGATAGACCCAATTG
GTCGGCTTGATGGCTTGGCGGTGATGAAGAAAATTCCCGTCTACATGAAAGGGGATGTTCTTATTGAAGGAACGGAATGTGCGTCTTTCTTGTGGAGTTTCAAGAAAATGTTAATTTAAGAGAAACTACCATTTCCATAGTAATCCGACTAACGAAGGAGTGCTGAAACCATTGCTCTAATTACGATTCCAAGAACCATT
TCCATCATCAGTCGGAATCCGGCGAATGAGAAGTGTTGAAACCATTGCTCAGAACATTCTGAATCCGGCGAATGAAGGATTGCTGAAATCATTGTTCGAATTACGAAGGAATCCGGCGAAAGAAGGATTGCTGAAACCATTGTTCGAATTACAAAGGAATCCGGCGAAAGAAGTATTGCTAAAACCATTCGAACTAAGGA
TTGCTGAGCCTCCAATATCAGTCGGAATCCGGCGAGGGAAGGATTGCTGAAACCGTTAATGCTCGAATTACAATTCCAAGAACCATTTCCATCATCGTCTCGTATCAGTCGGAATCCGACGAACAAGAAGTGCTGAAACCACTGCTCAGGTAGTTTTAAAACCTCAGTGCTAGATAGGATTTATGTTCATTTGTGAAGCG
TCATCTTACCGGGCAGTTTGACATGAA

>TRINITY_DN108750_c2_g3_i1 from sample A3 / Example unspliced isoform:

ATTCGTGTGCCGCTCCGAACGGCCGACTCCTTCTGCGATTTCCAATACGCCAGCACCATCGACAGAGAGTTCCCGGCTCCAGTCGTGTTGGGGAACTGCAAAAATTACAAAGGCTCCTCCCTTCACAAAGGCATGACGGCGGGCAACGAACAATTCCCTTTGGTGTACGGGAAATCTGCGTCGATTAATGATCAGACTGC
AAATCTCTGCCTGGATGGAAGCCTTGATTCGTGGAAAAATTGTGGTCTGTGATCTTTGGAAAAGTGGCGAGGGCGGAGAAGGGATTGCTCATGCTGCGAGCTGGCGATGCAGGGATGATTCTTTCCAACGGGCCTGAGAACAGAGAGGTCGATTTTTCGACCGAAAATCATATATTATCAGCAACAAGGGTCGAATCCGG
TCGCTCCGGAGACATTAGAGCGTATATTAACAGCATGATTGTCGCTTCTCGTCCAGAGGGTCGAATCTGGTCGCTCCGGAGATCCTTAAGCCGGACCTAGTTGCTCCGGGTATCCACATAGgtccggtctatttttgtttgaattctgttggtttgaattctgaaaacattggtgtgtttgaattatgattatccaattc
tgttggtttgaattctgaaaacattattgaattagGCTGGTTTGAATTCTGAATGATGCCACTCAAAGCCAACCAGACCCCACTCGGCTTTCAGACCTCCCGTGATAGACCCAATTGGTCGGCTTGATGGCTTGGCGGTGATGAAGAAAATTCCCGTCTACATGAAAGGGGATGTTCTTATTGAAGGAACGGAATGTGCG
TCTTTCTTGTGGAGTTTCAAGAAAATGTTAATTTAAGAGAAACTACCATTTCCATAGTAATCCGACTAACGAAGGAGTGCTGAAACCATTGCTCTAATTACGATTCCAAGAACCATTTCCATCATCAGTCGGAATCCGGCGAATGAGAAGTGTTGAAACCATTGCTCAGAACATTCTGAATCCGGCGAATGAAGGATTGC
TGAAATCATTGTTCGAATTACGAAGGAATCCGGCGAAAGAAGGATTGCTGAAACCATTGTTCGAATTACAAAGGAATCCGGCGAAAGAAGTATTGCTAAAACCATTCGAACTAAGGATTGCTGAGCCTCCAATATCAGTCGGAATCCGGCGAGGGAAGGATTGCTGAAACCGTTAATGCTCGAATTACAATTCCAAGAAC
CATTTCCATCATCGTCTCGTATCAGTCGGAATCCGACGAACAAGAAGTGCTGAAACCACTGCTCAGGTAGTTTTAAAACCTCAGTGCTAGATAGGATTTATGTTCATTTGTGAAGCGTCATCTTACCGGGCAGTTTGACATGAA