sp|Q8RWY1|ALKB8_ARATH ----> Alkylated DNA repair protein ALKBH8 homolog
Intron 1 GTAGATATAA ... ATTTCGTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 47.06 | 9 | 8 | 1 |
| A2 | 64.94 | 13 | 24 | 5.8 |
| A3 | 44.21 | 8.9 | 7 | 2.9 |
| A4 | 50 | 11 | 11 | 2.9 |
| A5 | 60 | 2 | 3 | 0 |
| A6 | 43.1 | 30.4 | 22.9 | 16.4 |
| A7 | 46.94 | 34.1 | 29.9 | 13.7 |
| A8 | 49.74 | 36.3 | 35.8 | 23.2 |
| A9 | 42.31 | 35.4 | 25.9 | 18.2 |
| A10 | 46.36 | 19.5 | 16.7 | 9.6 |
>TRINITY_DN44493_c9_g2_i9 from sample A6 / Example spliced isoformAAACCCTTAATTTTAGAGTTTTGAACTTTTTAATATTGCTCTCCGAATCCAAAATGCTTCGAATTTAGAAGGCTGCTCAGACACTTCAGAGTGTCTCGGGCATATTGCAAATATTTCACACTGAGTAACATTTCTCATATGCTATAAAGGAGCTAGATCTAAGGGTTGACTGGAGGAGACTTAGATTGGAAATACACTTT
GCAGGTTCAGCTCCAGGGCAAGGCCGGAGGACCAAGTTTACCAAGTGCACCCTTGCTTGTGGAGGAGAAATCCCGGACCAAAGTTCAAATCCCACTGCTAAGGAGGGGGCGACTTCATTTTCATCCTCAAGGAATCAAGAAATTTACATACTTGAACTCGCAAGCTATTGATGGAGATAAACAGAATGAAGTTCAACCAG
CCTAAATCTGTTGGTGGGTTGTCAGATCCTACCCCCCATCTATATGTTGCCAATTGTGGACCAGCTGTAGGCCTAGCCCTTGAAAGAATTGCAGCAGCTTTTGGCACTTTTGGTACTGTAACAGGCGTGCAAGAAGCTGATGAAAGTGGTACACGTGTGGTTGTTACATTTCGTGGAGTAGCTCCAGCTCAGGCTGCAAA
AGAAGCTTGGGATGGGATTCCGTGTAGTTACCTCGATGCACGTATTTTACACATGCAATATTCGGTACCGCAGGCACCTTCCCAGGTTGAAGATACATTACCAGTGTTTACAGTGTCTTCAGAGATGGGCATTCCTGGGATCTTTTTAATTCATGACTTTGTCAGTGAACAAGAAGAACATCAGTGGATGAAAGGCCCTG
GCAGGGGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGTTCATGTATAAGACACGGAATATTGATACGAAGCAATACTTGGGTCAGCTGCCAGTGTTTTTGTCGCAAATGCTAAATAGAATGGCATTACTTCCAGAGGTTATTCAGACAGAAAATTCTC
TGCCGCTTGACCAGTTAACGGTAAATGAATATCCTGCTGGAGTTGGTTTGTCTCCACATATAGACACACATTCTGCATTTCAGGGGTGCATCCTTTCTCTTTCATTAGCTGGCCCTTGTATAATGGAGTTTAGAAAGTACACAAATGGAGCTTGGTCTTCTCAAGCAATGGACACTGCTTTTGTCTGTGGATGGCTAAAT
AATGATATCAGTGGCATGGTGGGTACTGCTGGCAAACATCAGCAAGGTTCCAAACAGAAGCCTTATTTTGAGAGGAAGGCCATTTTTCTTCCGCCAAGGTCTCTTCTTGTATTATCTGAGGAGGCACGCTATGCATGGCACCATTATATCCCTCATCACAAGGTTAGGTTTGGACCTTGCGACTGTCGATTCCAACAATA
TTGCGATTCCCAAAGTCAGGTTATAGACAGTCTTGGGAAACTTGAGTGCAAAACTACAAATAACAGAGAACAAAAGCAAGGAATTTCTTGCTCAAATTAATGAAATTTATTGCACCAAGAGGAGCGCGGTGCTCTATAACCCAGTATGGGGGAGATGTTGTAACGTAACGTAACGTTACCATAGTTAAAAAAAATTATGT
TGGCTCATAAAATAAAAAAAATATGAAAAGTAATTGAAAAAATCCATGTCGGCTCGC
>TRINITY_DN44493_c9_g2_i6 from sample A6 / Example unspliced isoform:AAACCCTTAATTTTAGAGTTTTGAACTTTTTAATATTGCTCTCCGAATCCAAAATGCTTCGAATTTAGAAGGCTGCTCAGACACTTCAGAGTGTCTCGGGCATATTGCAAATATTTCACACTGAGTAACATTTCTCATATGCTATAAAGGAGCTAGATCTAAGGGTTGACTGGAGGAGACTTAGATTGGAAATACACTTT
GCAGGTTCAGCTCCAGGGCAAGGAAATTTACATACTTGAACTCGCAAGCTATTGATGGAGATAAACAGAATGAAGTTCAACCAGCCTAAATCTGTTGGTGGGTTGTCAGATCCTACCCCCCATCTATATGTTGCCAATTGTGGACCAGCTGTAGGCCTAGCCCTTGAAAGAATTGCAGCAGCTTTTGGCACTTTTGGTAC
TGTAACAGGCGTGCAAGAAGCTGATGAAAGTGGTACACGTGTGGTTGTTACATTTCGTGGAGTAGCTCCAGCTCAGGCTGCAAAAGAAGCTTGGGATGGGATTCCGTGTAGTTACCTCGATGCACGTATTTTACACATGCAATATTCGGTACCGCAGGCACCTTCCCAGGTTGAAGATACATTACCAGTGTTTACAGTGT
CTTCAGAGATGGGCATTCCTGGGATCTTTTTAATTCATGACTTTGTCAGTGAACAAGAAGAACATCAGTGGATGAAAGGCCCTGGCAGGGGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGTTCATGTATAAGACACGGAATATTGATACGAAGCAAT
ACTTGGGTCAGCTGCCAGTGTTTTTGTCGCAAATGCTAAATAGAATGGCATTACTTCCAGAGGTTATTCAGACAGAAAATTCTCTGCCGCTTGACCAGTTAACGGTAAATGAATATCCTGCTGGAGTTGGTTTGTCTCCACATATAGACACACATTCTGCATTTCAGGGGTGCATCCTTTCTCTTTCATTAGCTGGCCCT
TGTATAATGGAGTTTAGAAAGTACACAAATGGAGCTTGGTCTTCTCAAGCAATGGACACTGCTTTTGTCTGTGGATGGCTAAATAATGATATCAGTGGCATGGTGGGTACTGCTGGCAAACATCAGCAAGGTTCCAAACAGAAGCCTTATTTTGAGAGGAAGGCCATTTTTCTTCCGCCAAGGTCTCTTCTTGTATTATC
TGAGGAGGCACGCTATGCATGGCACCATTATATCCCTCATCACAAGgtagatataattaacgaggaaaggattcgtaggagttcgagaagggtatcattcacatttcgtaagGTTAGGTTTGGACCTTGCGACTGTCGATTCCAACAATATTGCGATTCCCAAAGTCAGGTTATAGACAGTCTTGGGAAACTTGAGTGCA
AAACTACAAATAACAGAGAACAAAAGCAAGGAATTTCTTGCTCAAATTAATGAAATTTATTGCACCAAGAGGAGCGCGGTGCTCTATAACCCAGTATGGGGGAGATGTTGTAACGTAACGTAACGTTACCATAGTTAAAAAAAATTATGTTGGCTCATAAAATAAAAAAAATATGAAAAGTAATTGAAAAAATCCATGTC
GGCTCGC
Intron 2 GTGGGTTGTC ... CGTGGAGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 79.05 | 6.3 | 8.1 | 30 |
| A2 | 84.84 | 2.6 | 12.6 | 16 |
| A3 | 79.95 | 5.3 | 19.9 | 21 |
| A4 | 84.05 | 3.4 | 17.6 | 13 |
| A5 | 64.67 | 4.9 | 6.3 | 9.7 |
| A6 | 72.49 | 8.7 | 21.6 | 20 |
| A7 | 84.93 | 3.7 | 20.7 | 20 |
| A8 | 60.25 | 12.7 | 16 | 20 |
| A9 | 70.45 | 6.9 | 18.3 | 13 |
| A10 | 62.99 | 14 | 7.7 | 35 |
>TRINITY_DN43287_c3_g2_i11 from sample A8 / Example spliced isoformCCACAATCCCTTGGTTGAAAGATTTGAACACAGTAGGAACTTCACCTGCAGAAACCCTTAATTTTAGAGTTTTGAACTTTTTAATATTGCTCTCCGAATCCAAAATGCTTCGAATTTAGAAGGCTGCTCAGACACTTCAGAGTGTCTCGGGCATATTGCAAATATTTCACACTGAGTAACATTTCTCATATGCTATAAAG
GAGCTAGATCTAAGGGTTGACTGGAGGAGACTTAGATTGGAAATACACTTTGCAGGTTCAGCTCCAGGGCAAGGCCGGAGGACCAAGTTTACCAAGTGCACCCTTGCTTGTGGAGGAGAAATCCCGGACCAAAGTTCAAATTCCACTGCTAAGGAGGGGGCGACTTCATTTTCATCCTCAAGGAATCAAGAAATTTACAT
ACTTGAACTCGCAAGCTATTGATGGAGATAAACAGAATGAAGTTCAACCAGCCTAAATCTGTTGCTCCAGCTCAGGCTGCAAAAGAAGCTTGGGATGGGATTCCGTGTAGTTACCTCGATGCACGTATTTTACACATGCAATATTCGGTACCGCAGGCACCTTCCCAGGTTGAAGATACATTACCAGTGTTTACAGTGTC
TTCAGAGATGGGCATTCCTGGGATCTTTTTAATTCATGACTTTGTCAGTGAACAAGAAGAACATGAACTTCTTGCAGCAGTGGATGAAAGGCCCTGGCAGGGGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGTTCATGTATAAGACACGGAATATTGATACGAAGCAATACTTGGGTCAGCTGCCAGTGTTTT
TGTCGCAAATGCTAAATAGAATGGCATTACTTCCAGAGGTTATTCAGACAGAAAATTCTCTGCCGCTTGACCAGTTAACGGTAAATGAATATCCTGCTGGAGTTGGTTTGTCTCCACATATAGACACACATTCTGCATTTCAGGGGTGCATCCTTTCTCTTTCATTAGCTGGCCCTTGTATAATGGAGTTTAGAAAGTAC
ACAAATGGAGCTTGGTCTTCTCAAGCAATGGACACTGCTTTTGTCTGTGGATGGCTAAATAATGATATCAGTGGCATGGTGGGTACTGCTGGCAAACATCAGCAAGGTTCCAAACAGAAGCCTTATTTTGAGAGGAAGGCCATTTTTCTTCCGCCAAGGTCTCTTCTTGTATTATCTGAGGAGGCACGCTATGCATGGCA
CCATTATATCCCTCATCACAAGGTAGATATAATTAACGAGGAAAGGATTCGTAGGAGTTCGAGAAGGGTATCATTCACATTTCGTAAGGGTGCTAAATCTTTGTTCTTCATGGCACGCAAAGGTAGAGTTCAGGCTAATGAGATTTGACTGTTCACCCTCCTCCCAAGCAGACCATTTGGAGAGTGCTTCGGGTCTCTGA
AACCATGGTGATGAAAGTAACAAGTGGCTGATGCAGACCTCTAAATCAATGGTGAGATTGTGGGTGCCTAATAAGCATGGAGTTACTAGACTTCACCAGCTAAAAATTAAAAGTCTTAAAATCGTTTGTGACTCGTTGTTGCATTTGCACAAAGACTGGTTTTCTTAAACTTTGTGAGAACTCCCATTTGTGATGGGCAT
TTCTACAAAATTATACATAAGACAAGCAATGTGGTTAGCTAGTTGTACCCTGTCAGTTTTAAATCTTGGATATAAATTTATTCTTCTAAGGTTCCCCATTTATTTCCAACTAAATGATTACTCACTGAACTGATGTTATCCTTTTGTTATGCTTTACTCTTTCCAACTGATTCAATTCTTACTCCCCAATCATATTGTAC
AGCTGAATGTTGCATCCTTTCCTTTTTGAGCATTATATCTAGTTTTTATTTTGTTGATTAAGGTCAGTTACTGTTCTTGCAGGAATATCTGATTGAAATTTTGGCTATAAACATTTACGGAGATGAATTTATCAGATATGAATGCAATATGTTTTGAACGTTATCATGGCACCCAGGCCTCTTCTAGAAACTAAGGTTTA
TTTACTACGATGATGATAAGATCAGTTGAAAAATCTGCTCTTGTTGTAAGATCACTGCTTGGTGCTAAACACTCTAGTTATAATATGTGCTTCTATAGAAAAATCTTCACCAGATAGCATAGATAGTGTATATTCACAGATGTTTTGAATTGTTTTTGTTTCTTATTACTTGTATAGGTTGAAAAGTTTAGAATATTTGT
TAATTGCCTTCCTATTTTCCTTCCCTTTTTGGCTTGATATAGGTTGGCAATGGATTTTTTTTTCTTAATTTTTGCTCCCGTATACTTTTCAATAATAATGTTTTCATATGTTGGGGTGCACAAGTGCTTT
>TRINITY_DN43287_c3_g2_i8 from sample A8 / Example unspliced isoform:CCACAATCCCTTGGTTGAAAGATTTGAACACAGTAGGAACTTCACCTGCAGAAACCCTTAATTTTAGAGTTTTGAACTTTTTAATATTGCTCTCCGAATCCAAAATGCTTCGAATTTAGAAGGCTGCTCAGACACTTCAGAGTGTCTCGGGCATATTGCAAATATTTCACACTGAGTAACATTTCTCATATGCTATAAAG
GAGCTAGATCTAAGGGTTGACTGGAGGAGACTTAGATTGGAAATACACTTTGCAGGTTCAGCTCCAGGGCAAGGCCGGAGGACCAAGTTTACCAAGTGCACCCTTGCTTGTGGAGGAGAAATCCCGGACCAAAGTTCAAATTCCACTGCTAAGGAGGGGGCGACTTCATTTTCATCCTCAAGGAATCAAGAAATTTACAT
ACTTGAACTCGCAAGCTATTGATGGAGATAAACAGAATGAAGTTCAACCAGCCTAAATCTGTTGgtgggttgtcagatcctaccccccatctatatgttgccaattgtggaccagctgtaggcctagcccttgaaagaattgcagcagcttttggcacttttggtactgtaacaggcgtgcaagaagctgatgaaagtgg
tacacgtgtggttgttacatttcgtggagtagCTCCAGCTCAGGCTGCAAAAGAAGCTTGGGATGGGATTCCGTGTAGTTACCTCGATGCACGTATTTTACACATGCAATATTCGGTACCGCAGGCACCTTCCCAGGTTGAAGATACATTACCAGTGTTTACAGTGTCTTCAGAGATGGGCATTCCTGGGATCTTTTTAA
TTCATGACTTTGTCAGTGAACAAGAAGAACATGAACTTCTTGCAGCAGTGGATGAAAGGCCCTGGCAGGGGCTCATGAAAAGAAGAGTTCAACACTACGGTTATGAGTTCATGTATAAGACACGGAATATTGATACGAAGCAATACTTGGGTCAGCTGCCAGTGTTTTTGTCGCAAATGCTAAATAGAATGGCATTACTT
CCAGAGGTTATTCAGACAGAAAATTCTCTGCCGCTTGACCAGTTAACGGTAAATGAATATCCTGCTGGAGTTGGTTTGTCTCCACATATAGACACACATTCTGCATTTCAGGGGTGCATCCTTTCTCTTTCATTAGCTGGCCCTTGTATAATGGAGTTTAGAAAGTACACAAATGGAGCTTGGTCTTCTCAAGCAATGGA
CACTGCTTTTGTCTGTGGATGGCTAAATAATGATATCAGTGGCATGGTGGGTACTGCTGGCAAACATCAGCAAGGTTCCAAACAGAAGCCTTATTTTGAGAGGAAGGCCATTTTTCTTCCGCCAAGGTCTCTTCTTGTATTATCTGAGGAGGCACGCTATGCATGGCACCATTATATCCCTCATCACAAGGTTAGGTTTG
GACCTTGCGACTGTCGATTCCAACAATATTGCGATTCCCAAAGTCAGGTTATAGACAGTCTTGGGAAACTTGAGTGCAAAACTACAAATAACAGAGAACAAAAGCAAGGAATTTCTTGCTCAAATTAATGAAATTTATTGCACCAAGAGGAGCGCGGTGCTCTATAACCCAGTATGGGGGAGATGTTGTAACGTAACGTA
ACGTTACCATAGTTAAAAAAAATTATGTTGGCTCATAAAATAAAAAAA