sp|Q8W4D8|DDL_ARATH ----> FHA domain-containing protein DDL
Intron 1 GTACTCTTCT ... CTCTCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.76 | 39 | 19 | 0 |
| A2 | 36.25 | 51 | 29 | 2 |
| A3 | 34.72 | 47 | 25 | 1 |
| A4 | 34.38 | 21 | 11 | 0 |
| A5 | 40 | 27 | 18 | 0 |
| A6 | 32.61 | 186 | 90 | 0 |
| A7 | 37.04 | 187 | 110 | 2 |
| A8 | 32.33 | 180 | 86 | 4 |
| A9 | 32.72 | 146 | 71 | 0 |
| A10 | 31.9 | 158 | 74 | 0 |
>TRINITY_DN45397_c1_g1_i1 from sample A8 / Example spliced isoformGACTAACTAAAAATGAAAAGAAGACGCTGTGCATATGCTCGGAGTCGAACACTCCTATGAATTCAAACGGGAAAGGATTGGTGGTAGCCATTTTACGCTACTAATGAAAAACAATACTATTCCGTGCGGTTTCTTCATTCAACTTCAACCGTTGAAGACAACCAGAGAAGCTCCGAGATAAGACATTCTCATTTATTTTA
AGCGAAGGGAGAAGGGACAGAATCTAAATCTCTGTTCTTCGTAGGTCTGTGTACTCGTTTTTTCAATGACACCTGTTCGAGCAAGGTCCTCTGCACGTTCAAGGTCTCCTATCAGGAGGAGATCATCACGGTCATTATCTCCTATTCGAGGAGGAAGAAGGAGGTCATCACGGTCATTTTCTCCTGTTCGAGCAAGTAGG
AGGAGGTCGTCGCGTTCAAGATCTCCCATTAGAAGAAGGTCACCATATCGGCGAACATCTCCTCTTCCACCGAGAACAGCTGCAAGGACTAGGTCTCCCAGTGGAACAAAGGGTCGTGTTCATGTTAAGTCTCCAGTCAGATCGAGATCTCCCATTCAGGCCAGGTCTCCTGTTCGAGTACGATCTCTCAAACGAGCTGC
ATCCCCTAGGTCTCTTTCTCGTTCACCCTCTCCTCGCTCCAAGCGGATGAGACAAACTCAAGAAGGCAGGGAATTTGATAGGGTTAAGGATAGGGAATATGACAGAAGAAGCAACGAGGACCATGACAGAGGCAGGCATAGAGATAAAGACAAGGGCTCAAGTAGAGATGGAACAAGGGATACAAGAGGGCGAGACAAGT
ACCTGGATCCCTCTTCACTGTTACGACACTCACGGTCAATATCTCCAAACGATCACAGACAGAGACGGAAACATGGTTCTCAATCACCACCTCGTAGAAGTAGCGAGCGTGGACCAGACAAGCCCAAAACTGTTAATGCTGGAGCTTATGATGAGGTACCAAACCAAAGTGCAGAAGATATGCCTCGAAGTGAAAATCCT
TCCCATGACTCATTAGCAAAGATGAAAGCTGCTGAAGAAGCCCTAGAAGGGAAAGAAAATGATAAGGTCAAACCTTCATTTGAACTGTCAGGGAAGCTTGCTGCAGAAACCAACAAAGTAAGGGGTATAGCATTGTTATTCAATGAACCACCTGATGCTCGAAAACCAACGATCAGATGGCGCCTCTATGTTTTCAAGGG
TGGAGAGGCCCTCACTGAGCCTCTTTATATTCATCGTCAAAGCTGTTATCTGTTTGGAAGAGAAAGGAGGGTGGCAGATGTTCCAACTGATCATCCTTCGTGCAGTAAACAGCATGCTGTTATCCAATTTCGACAAGTTGAGAAAGAAGAACCCGATGGCACAGTATCAAAGCGAGTAAGGCCCTAC
>TRINITY_DN45397_c1_g1_i3 from sample A8 / Example unspliced isoform:GACTAACTAAAAATGAAAAGAAGACGCTGTGCATATGCTCGGAGTCGAACACTCCTATGAATTCAAACGGGAAAGGATTGGTGGTAGCCATTTTACGCTACTAATGAAAAACAATACTATTCCGTGCGGTTTCTTCATTCAACTTCAACCGTTGAAGACAACCAGAGAAGCTCCGAGATAAGACATTCTCATTTATTTTA
AGCGAAGGGAGAAGGGACAGAATCTAAATCTCTGTTCTTCGTAGGTCTGTGTACTCGTTTTTTCAATGACACCTGTTCGAGCAAGGTCCTCTGCACGTTCAAGGTCTCCTATCAGGAGGAGATCATCACGGTCATTATCTCCTATTCGAGGAGGAAGAAGGAGGTCATCACGGTCATTTTCTCCTGTTCGAGCAAGTAGG
AGGAGGTCGTCGCGTTCAAGATCTCCCATTAGAAGAAGGTCACCATATCGGCGAACATCTCCTCTTCCACCGAGAACAGCTGCAAGGACTAGGTCTCCCAGTGGAACAAAGGGTCGTGTTCATGTTAAGTCTCCAGTCAGATCGAGATCTCCCATTCAGGCCAGGTCTCCTGTTCGAGTACGATCTCTCAAACGAGCTGC
ATCCCCTAGGTCTCTTTCTCGTTCACCCTCTCCTCGCTCCAAGCGGATGAGACAAACTCAAGAAGGCAGGGAATTTGATAGGGTTAAGGATAGGGAATATGACAGAAGAAGCAACGAGGACCATGACAGAGGCAGGCATAGAGATAAAGACAAGGGCTCAAGTAGAGATGGAACAAGGGATACAAGAGGGCGAGACAAGT
ACCTGGATCCCTCTTCACTGTTACGACACTCACGGTCAATATCTCCAAACGATCACAGACAGAGACGGAAACATGGTTCTCAATCACCACCTCGTAGAAGTAGCGAGCGTGGACCAGACAAGCCCAAAACTGTTAATGCTGGAGCTTATGATGAGGTACCAAACCAAAGTGCAGAAGATATGCCTCGAAGTGAAAATCCT
TCCCATGACTCATTAGCAAAGATGAAAGCTGCTGAAGAAGCCCTAGAAGGGAAAGAAAATGATAAGGTCAAACCTTCATTTGAACTGTCAGGGAAGCTTGCTGCAGAAACCAACAAAGTAAGGGGTATAGCATTGTTATTCAATGAACCACCTGATGCTCGAAAACCAACGATCAGATGGCGCCTCTATGTTTTCAAGGG
TGGAGAGGCCCTCACTGAGCCTCTTTATATTCATCGTCAAAGCTGTTATCTGTTTGGAAGAGAAAGGAGGGTGGCAGATGTTCCAACTGATCATCCTTCGTGCAGTAAACAGCATGCTGTTATCCAATTTCGgtactcttctatcaaaatggtttctatattcaagattgagacctatctatcttattggaaggctattt
ggtgtttctttagcaacttaaatatttatttgttatttcattttatctgactatatagcctctctgtagACAAGTTGAGAAAGAAGAACCCGATGGCACAGTATCAAAGCGAGTAAGGCCCTAC