sp|K4PW38|RSS3_ORYSJ ----> Protein RICE SALT SENSITIVE 3
Intron 1 GTCTATCTGT ... TGATTTCCAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 4.5 | 0 | 0 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | 50 | 1 | 0 | 1 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 0 | 1 | 0 | 0 |
| A7 | 41.66 | 1.5 | 0 | 1 |
| A8 | 50 | 4 | 0 | 4 |
| A9 | 0 | 2 | 0 | 0 |
| A10 | -1 | 0 | 0 | 0 |
>TRINITY_DN31053_c0_g1_i1 from sample A7 / Example spliced isoformATTTTATTCTGACCATATTTTTTCCATCGCTTCATTTATCTTATTGCTTACCTTCGCTCTGTGTAAAAAGAAAGATGCAGGTGCCATTACCTCATTACCTTCATTTTCATTGTGTTGAATTTCAATAGATTAGACCTTTTATCTCTGGATATATTTCAAAAGACTATCTGATTATGAGACTGTGGCCATTTCAGACCATT
GCAGTTGTTGCAGTTCGGGAAGGTCTGATTCAGCTCGGATCACTTCACAAGATTGTGGAGGATCTGAACTTCGTAATCTTCTTACAACGAAAGTTCAACTATCTGCAAAGCATTCCAGGGGTGTTTGCCATCCACCCCCCGCTCTCATTTGATGTCAGAAGATCGAAAATGGTCAGTTCTCCTTCTCAGGAAAACCCATC
ATGCGACGGATTCAATAATCATGGAGACCACCATGAGAAAATATGTCCTTCACCAACAAAAGATCATCCTCATCCCCATACTCAGCTCGTAGGTATGAAGCGGCCACCGGATCAGTTCATCGACATGTCGAAGCAGAACTTATATGGATCGTGCCTCTCTCCAAACAAAGCCATCAACGCAGGCTGGCACAGCCGCCAAG
CTTCGATTAATAATAATACAATAGTTCTCCCATTGATGCAGCCATCCATGTCCAGCCTTCAGGCCTTGTTATCCAAGCTGCCTTCTGTTACATCTGCAGAACAGACTTCCTCCCATTTCCCAGCTTCTTTGGAGCCTGTGAGAGCTTCCAGCTTCAATGCTCGACACCCAGTGACAAATCCACTGGAAACTTCAGAAGCT
TCTTCCTTCCAGAAGTCGTGCCTAACACTGAACAGCACTGTTCACATGAGTACCAGCCCATCTGCTCATGCTGATTTCGCAGACAGCAAGCTTCATGTTAGGCATCAGGAGGCCAGCGCCTGTTCCAATTCATCTTCCCACCATGGCCTGTGCCCTAATTTCTTGGATTCTTGCTCAAATCCTCTGCAGTTCCATGAACC
CCATGGAGATTTGGAGACCAACGACGATGCTTATCATTCGTTGCTTAACCAGATTATAAGCTAATTCTTTGATCTTATTTGAATTTTTGAGTTTAGTTATGATTATTTTTTGGTATCCTTCCATTGATGTATGGAGGGTAACCGTATAAGTGTCAGGCTATTATTTAGTATTGTGTAAGAGGAATCCATGTCCTTCGTTG
ACTGGAGCAGTAAAAGCGATCAGAAAATTCATGACCACTGTATTGTTTTTTAATGTAGAAGAGTAAGGATACAACCAGGCAGCCTTCTTCGCAGTTTGTTTGTATCGACTGAAATATTAAGGGGAGGCTTGC
>TRINITY_DN31053_c0_g1_i2 from sample A7 / Example unspliced isoform:ATTTTATTCTGACCATATTTTTTCCATCGCTTCATTTATCTTATTGCTTACCTTCGCTCTGTGTAAAAAGAAAGATGCAGGTGCCATTACCTCATTACCTTCATTTTCATTGTGTTGAATTTCAATAGATTAGACCTTTTATCTCTGGATATATTTCAAAAGACTATCTGATTATGAGACTGTGGCCATTTCAGACCATT
GCAGTTGTTGCAGTTCGGGAAGGTCTGATTCAGCTCGGATCACTTCACAAGgtctatctgtataccattttatcaaattaagcattgttctatcaattcctattgtacgaacctaaaaacctaaatctgttttctctgtgtattgatttccagATTGTGGAGGATCTGAACTTCGTAATCTTCTTACAACGAAAGTTCAA
CTATCTGCAAAGCATTCCAGGGGTGTTTGCCATCCACCCCCCGCTCTCATTTGATGTCAGAAGATCGAAAATGGTCAGTTCTCCTTCTCAGGAAAACCCATCATGCGACGGATTCAATAATCATGGAGACCACCATGAGAAAATATGTCCTTCACCAACAAAAGATCATCCTCATCCCCATACTCAGCTCGTAGGTATGA
AGCGGCCACCGGATCAGTTCATCGACATGTCGAAGCAGAACTTATATGGATCGTGCCTCTCTCCAAACAAAGCCATCAACGCAGGCTGGCACAGCCGCCAAGCTTCGATTAATAATAATACAATAGTTCTCCCATTGATGCAGCCATCCATGTCCAGCCTTCAGGCCTTGTTATCCAAGCTGCCTTCTGTTACATCTGCA
GAACAGACTTCCTCCCATTTCCCAGCTTCTTTGGAGCCTGTGAGAGCTTCCAGCTTCAATGCTCGACACCCAGTGACAAATCCACTGGAAACTTCAGAAGCTTCTTCCTTCCAGAAGTCGTGCCTAACACTGAACAGCACTGTTCACATGAGTACCAGCCCATCTGCTCATGCTGATTTCGCAGACAGCAAGCTTCATGT
TAGGCATCAGGAGGCCAGCGCCTGTTCCAATTCATCTTCCCACCATGGCCTGTGCCCTAATTTCTTGGATTCTTGCTCAAATCCTCTGCAGTTCCATGAACCCCATGGAGATTTGGAGACCAACGACGATGCTTATCATTCGTTGCTTAACCAGATTATAAGCTAATTCTTTGATCTTATTTGAATTTTTGAGTTTAGTT
ATGATTATTTTTTGGTATCCTTCCATTGATGTATGGAGGGTAACCGTATAAGTGTCAGGCTATTATTTAGTATTGTGTAAGAGGAATCCATGTCCTTCGTTGACTGGAGCAGTAAAAGCGATCAGAAAATTCATGACCACTGTATTGTTTTTTAATGTAGAAGAGTAAGGATACAACCAGGCAGCCTTCTTCGCAGTTTG
TTTGTATCGACTGAAATATTAAGGGGAGGCTTGC