sp|Q9M111|SUS3_ARATH ----> Sucrose synthase 3
Intron 1 GTTTATTTCA ... TTTTCTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 1 | 1 | 1 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | 50 | 1 | 1 | 1 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 41.18 | 5 | 3 | 4 |
| A7 | 49.09 | 14 | 13 | 14 |
| A8 | 42.22 | 26 | 17 | 21 |
| A9 | 48.39 | 16 | 14 | 16 |
| A10 | 44.83 | 8 | 7 | 6 |
>TRINITY_DN38138_c0_g1_i2 from sample A7 / Example spliced isoformGGACACCGTTGGGCAGTATGAGAGCCATGGTGCTTACACACTACCCGGGCAATACCGTGTAGTCTCAGGCATTGATGTTTTCGATCCCAAGTTCAACATTGTGTCTCCTGGAGCTGATATGAGTATATATTTCCCTTACAAAGAAAAACAAAGACGGCTTACGCAATTCCATGAAGCTATTGAAGAACTTCTGTTCAACC
CTGTCGACACACTTGAACACAAAGGTTTGCTCCATGACAAGAAGAAACCCATAATATTTTCTATGGCTAGACTGGACCGAGTGAAAAATATGACAGGACTTGTAGAATGGTTTGGAAAAAACAGTCGGTTGAGGAAGCTTGTGAACCTTGTTGTGGTGGCTGGTTTTATTGATTCATCAAAATCAAAAGACAGGGAAGAG
ATTGCAGAGATTGAGAAAATGCATGGCCTCATAATGAAGTATAATTTGAATGGTGATTTTAGATGGATATCTTCTCAGAAAGACAGAATACGTAATGGGGAGCTTTACCGTTATATTGCCGACACGAAGGGTGCCTTTATTCAGCCTGCTCTTTATGAGGCTTTTGGGTTAACAGTGATCGAAGCTATGACTTGTGGCTT
GCCAACATTTGCTACGTGTAAAGGTGGCCCTGCAGAGATTATCATTGATGGCGTTTCTGGATTTCATATTGATCCAAACAATGGCGATGAAGCCAGTGAAAAGATTGCAAACTTTTTCGAGAAATGCAAAATAAATACAAATTATTGGAATGTAGTCTCAGAAGCAGGGCTTCAACGTATATATGAAAGCTATACATGGA
AGATTTATGCAGAAAAATTGATATATTTGACCAATATATATGGATTTTGGAAATATGTATCCAAAAGCAAGAGAGAAGAAATTCATCGATATATGAAAATGTTTTACATTCTAAAGTATCAAAACCTGGTAAAAACTGTGCCCATAGTAATGGATGAGAACTCTAAAATCTCAAAAGAAGAGCAAGCTCCAAAACTCACA
ATAGAAGATTGTCGACCAAATGGGTTAATTGGTAGCCAATCACGTATTAAAAGATTTCTTTCATCACTATCTCGAGCAATGGAGCGCCAGAATACGACAAGGGTTGAGCAATAATCATTAAGGGATTGAAGACCTACTTCATTAATAGTTGATACATGGGACCGCTAAAAATATACATATTATTTGATTTGTAATCTATA
ATGGAAATTAAATACATTTTATTATATATGGTTTTCGATAGAAGGTGTTGGAGTTGTAAAATGATATTCATTTTGGAATTTAGTTTTTATTATTATGAAAATTAAATATATTTTATTATATAAAGGTGC
>TRINITY_DN38138_c0_g1_i1 from sample A7 / Example unspliced isoform:GGACACCGTTGGGCAGTATGAGAGCCATGGTGCTTACACACTACCCGGGCAATACCGTGTAGTCTCAGGCATTGATGTTTTCGATCCCAAGTTCAACATTGTGTCTCCTGGAGCTGATATGAGTATATATTTCCCTTACAAAGAAAAACAAAGACGGCTTACGCAATTCCATGAAGCTATTGAAGAACTTCTGTTCAACC
CTGTCGACACACTTGAACACAAAGGTTTGCTCCATGACAAGAAGAAACCCATAATATTTTCTATGGCTAGACTGGACCGAGTGAAAAATATGACAGGACTTGTAGAATGGTTTGGAAAAAACAGTCGGTTGAGGAAGCTTGTGAACCTTGTTGTGGTGGCTGGTTTTATTGATTCATCAAAATCAAAAGACAGGGAAGAG
ATTGCAGAGATTGAGAAAATGCATGGCCTCATAATGAAGTATAATTTGAATGGTGATTTTAGATGGATATCTTCTCAGAAAGACAGAATACGTAATGGGGAGCTTTACCGTTATATTGCCGACACGAAGGGTGCCTTTATTCAGCCTGCTCTTTATGAGGCTTTTGGGTTAACAGTGATCGAAGCTATGACTTGTGGCTT
GCCAACATTTGCTACGTGTAAAGGTGGCCCTGCAGAGATTATCATTGATGGCGTTTCTGGATTTCATATTGATCCAAACAATGGCGATGAAGCCAGTGAAAAGATTGCAAACTTTTTCGAGAAATGCAAAATAAATACAAATTATTGGAATGTAGTCTCAGAAGCAGGGCTTCAACGTATATATGAAAGCTATACATGGA
AGATTTATGCAGAAAAATTGATATATTTGACCAATATATATGGATTTTGGAAATATGTATCCAAAAGCAAGAGAGAAGAAATTCATCGATATATGAAAATGTTTTACATTCTAAAGTATCAAAACCTGGTAAAAACTGTGCCCATAGTAATGGATGAGAACTCTAAAATCTCAAAAGAAGAGCAAGCTCCAAAACTCACA
ATAGAAGATTGTCGACCAAATGGGTTAATTGGTAGCCAATCACGTATTAAAAGgtttatttcattattattttctgtagATTTCTTTCATCACTATCTCGAGCAATGGAGCGCCAGAATACGACAAGGGTTGAGCAATAATCATTAAGGGATTGAAGACCTACTTCATTAATAGTTGATACATGGGACCGCTAAAAATAT
ACATATTATTTGATTTGTAATCTATAATGGAAATTAAATACATTTTATTATATATGGTTTTCGATAGAAGGTGTTGGAGTTGTAAAATGATATTCATTTTGGAATTTAGTTTTTATTATTATGAAAATTAAATATATTTTATTATATAAAGGTGC