NA ----> NA
Intron 1 GTAAGTGACT ... AAGTCATAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.59 | 52.5 | 27 | 13 |
| A2 | 26.71 | 59 | 28 | 15 |
| A3 | 25 | 81 | 23 | 31 |
| A4 | 27.54 | 50 | 24 | 14 |
| A5 | 22.08 | 30 | 13 | 4 |
| A6 | 36 | 8 | 7 | 2 |
| A7 | 29.69 | 90 | 51 | 25 |
| A8 | 27.13 | 47 | 20 | 15 |
| A9 | 21.03 | 77 | 32 | 9 |
| A10 | 24.78 | 85 | 28 | 28 |
>TRINITY_DN38174_c0_g1_i4 from sample A6 / Example spliced isoformGAAAGTTTTGGTCGTAGAAGCTAATGAATTTATCCCGCTAAATATCACACTGGAAAGCTCATTCATTTGCATTACTCTGCCGCCGTTCGTCTCTAGTTTTTTGTCCAGTCCGCTTAACGACCTAAAAGAATTCCAACAGCCCAGGGCGCCCTAGCTGAATCTATTACTTGCTTTGGGAAGTAAAGATTTGATCTATTTGG
GAGCTGTTGAGTGAGGAGACAAGGACCTACATCTACCATCCGGATTCAGTTTTCCAGGCCTGTAGAAGCTGTGATGCCAGGTGAAAAGGAAGATTCCCTTGTAAGCCAACTCCCAGAAGCTGATGCTTTGCCTGATGGATTTGCTGAAAGCTTCTCTGAGACTGCAGATAGTTCTGCTTCAACTGGTGTGTCTGACCAGC
GAATATTTGCCAGGCCCGTAGAAGCTGCGATGCCAGGTGAAAAGGAAGATTCCCTTGTAAGCCAACTCCCAGAAGCTGATGCTTTGCCTGATGGATTTGCTGAAAGCTTCTCTGAGACTGCAGATAGTTCTGCTTCAACTGGGGTGCCTGACCAGAAAGACGAGGATTATTTGGATGGAAAGAGTTCTGATTTTGAGGTC
AGAACCCAAGAATCAGAAGCTATGTCCTCGTTATTCTCAGACTCCTGCATTGAACAGGCATCTTTAATGCCAGAAGCAACAGAGTTTTGCAAAGGGGCAGGTACTGCAAGCCCCATTTCAGATAGCAGAACGGAGAAAACAGAGAAGGCAAGGACATTTCCTGTGCAACTTTCTGACAGGGATGCTGTTGGCTTTCATGG
CAGTTTGGCCGAATCATCAACAAAATATTGCTTAGATCACAATAACATCAAACAGGAGATTACGACTCTGGAGAGTATTGAAAATGCTTCAGTTGATGAGCATTTCTCTCCAAGAGGATGCCACAGTCCAGCTGATATTCCACCATTATTGTCTACAATTGATGGATTGACTGCATGCCCATCTCAAAACACGAACCATT
TTGAATCAGATTGTCTAAAATCTAATCAGTACAGCCTAAAAGAAGTGGAGAAAAAGGAGGTTAAAGCCTTCCAGAGGAGTGAGCAAGATAGTAATGGTAGTTCAAGATCATCAAAACTGGAAAGCCATGCTGAAGCTAAATCTAAGCAGACAAAAGGAACATCAAAGCTTGAAAGGGAACTGGCAGACTCACATCAGAAG
TATTTGCAAGTTGTTATGGAAAGAGACACTGCCCTTGTGGAATTGAGGAAGAATGTAGCAGTTCGTGAAAAGTTGGAATCTCTTTGCAGAGAGTTACAGCGTCAGAATAAAATGCTGACAGATGAATGCAAAAGGGTATCTACAGAAGGACAACAGAAGAGATTGGATCTTTCTACTAAATTTCATGATGCCATCAAGGA
AGCAAGTACTAAGCTTGGGGAAGAAAGAGATGAAAATGAAATGTTAAGGCAGAAGCTAAAGCAATTCTCAGAACAGTATGAACTCCGTGAGCAACAATTTATGCAGCAGTTAAAGAAAAAGACACTAGAGCTGCAGCTTGCTGATGTAAAGCTTCAACAACAACTAGAGGCTTGTTGCCAAGAACAAGCAAAAGTGCAGC
TATATACTGAACAGATTTCACAATTATTGGAAACGGAGAAAAATCTGCGCTTGCAGTTGGCTGCTGATGGAGAAAAGTTTCAGCAGTTCCAGGAGACACTGACAAAGAGCAACGAGGTTTTTGAATCATTCAAAAAGGAGATGGAAAAGATGGCAAAAACAATCAAGGACCTTAACAAAGAAAACAACTTTCTTAAGAGG
AAATGTGAAAAGACAGATGTCTCCCTCATTGAACTTGTGGACGAGAGGGAGAAGCTGAAGAAACAGCTAGACAAAACAAAAAATCAAAAAGAGAAGCTCGAATCTCTTTGCCGTTCACTACAGGCAGAGCGCAAACAGCAAAGTGATGTTAATACACCTGCTGATGTTCTGCTTGGGTCAGATAATCCAAACATAGAGGA
TCCTGGGAAGAGCACATAGATGGCAGATGCTTTATATAACTATATTTTTGTTATGGTATTTTTTTATTGATCAACTGCATCCTACTCAAGAATTTTAATTTTAGTAGCAAAATTTAGCCCATGGGCTGATTTTCCATGTTATTTTTCAAAAAAATATTTACCAATTTCCATCTTTTTCTTTTAATATGATTTGCCTAAAT
TTTGTAGGATAAAAATATTTTACTCTAAATATTGCCAAAATCGTCTAGAAATTATATAGAATCCTTAAAAATTTGAATATTTTTACGAAAATTTTTCCAAACATTTTATGGTTCGAAATTTAAGAATTAATAAGATTCACCAATGTTTCTACACTTTAAGAAAATTATGGATCCTTAAAATTTTCCCTACTTTACTCACT
GATCCATTGTTCAAGATTTGACCGAAATTTGGCAAAAACATAAAACACGGCACACTACCTTGCCTTTGTATAGGCCAACAACAACAATTGTTTACATATCCTGAGC
>TRINITY_DN38174_c0_g1_i3 from sample A6 / Example unspliced isoform:GAAAGTTTTGGTCGTAGAAGCTAATGAATTTATCCCGCTAAATATCACACTGGAAAGCTCATTCATTTGCATTACTCTGCCGCCGTTCGTCTCTAGTTTTTTGTCCAGTCCGCTTAACGACCTAAAAGAATTCCAACAGCCCAGGGCGCCCTAGCTGAATCTATTACTTGCTTTGGGAAGTAAAGATTTGATCTATTTGG
GAGCTGTTGAGTGAGGAGACAAGGACCTACATCTACCATCCGGATTCAGTTTTCCAGGCCTGTAGAAGCTGTGATGCCAGGTGAAAAGGAAGATTCCCTTGTAAGCCAACTCCCAGAAGCTGATGCTTTGCCTGATGGATTTGCTGAAAGCTTCTCTGAGACTGCAGATAGTTCTGCTTCAACTGGTGTGTCTGACCAGC
GAATAgtaagtgacttccagcgagcatattctagtggtcgtgtctgttgttggtagatggaagtcataagTTTGCCAGGCCCGTAGAAGCTGCGATGCCAGGTGAAAAGGAAGATTCCCTTGTAAGCCAACTCCCAGAAGCTGATGCTTTGCCTGATGGATTTGCTGAAAGCTTCTCTGAGACTGCAGATAGTTCTGCTT
CAACTGGGGTGCCTGACCAGAAAGACGAGGATTATTTGGATGGAAAGAGTTCTGATTTTGAGGTCAGAACCCAAGAATCAGAAGCTATGTCCTCGTTATTCTCAGACTCCTGCATTGAACAGGCATCTTTAATGCCAGAAGCAACAGAGTTTTGCAAAGGGGCAGGTACTGCAAGCCCCATTTCAGATAGCAGAACGGAG
AAAACAGAGAAGGCAAGGACATTTCCTGTGCAACTTTCTGACAGGGATGCTGTTGGCTTTCATGGCAGTTTGGCCGAATCATCAACAAAATATTGCTTAGATCACAATAACATCAAACAGGAGATTACGACTCTGGAGAGTATTGAAAATGCTTCAGTTGATGAGCATTTCTCTCCAAGAGGATGCCACAGTCCAGCTGA
TATTCCACCATTATTGTCTACAATTGATGGATTGACTGCATGCCCATCTCAAAACACGAACCATTTTGAATCAGATTGTCTAAAATCTAATCAGT