NA ----> NA
Intron 1 GTATATGTAG ... GGATTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 18.5 | 37 | 13 |
| A2 | 73.68 | 10 | 28 | 10 |
| A3 | 75.55 | 11 | 34 | 13 |
| A4 | 62.79 | 16 | 27 | 5 |
| A5 | 93.75 | 1 | 15 | 4 |
| A6 | 86.49 | 59.5 | 381 | 53 |
| A7 | 83.91 | 85 | 443.5 | 44 |
| A8 | 84.16 | 143 | 760 | 95 |
| A9 | 84.29 | 96 | 515 | 66.3 |
| A10 | 76.69 | 93 | 306 | 31 |
>TRINITY_DN34734_c0_g1_i1 from sample A6 / Example spliced isoformGTCTCGCTGCTTTAATTAACGTTTTGTTCTCTTTCAAACTCGCTTGTCTTCGAACATTTTCTACAAAAATCGAGTCTTTGAAGTCCCGCGAAATTGAAATATGCTGAGATCTCTGATCTCCAACAGATTGCAATGGCAATTTCAGCGCTTCAAACACACAAATGGAAATGCAGATTCCCCAAGCCAAATGCTCAGGAGCA
AATTCATGCAGATGAAGAACAGCAGGAAATCCAAGAAGAAGAAGAACGAAGTCATGGTGGAAGTGCCCGAATCCAGTGCTTACCTGGACACTGCAACAGTTCCCATGGTCCTCACTGCAGTAGCCATTGCACTGTTCATGAAAATGCTCATGATGTACGATGAATCAACGGAGCAGGAGAGAATAGAGCGTAGAGCCAGG
AAAGCTCCTCCAGAACAGGGCTCTGTACGAATGCTTAGTCGTGAAGAATGGGATGCGATTCAAGAAATAAGGCCCAGGACGCCATTCGAGTCTAGAATTGCACGGCCCAACGCTCGCTTGAGGACGGGGGATTCTATAGACCTGGATGACTTCAAAGACTGGAGCATTGATGTTCTCACAGATGCATTTACAAGAGTTGA
GGAGAATGTTCAGCATAACATTAAAGACAAGTGATAACCAATTCATTCTACCTGTTATGACATTCTAAAACAGGGTATATCCAGAAATAGCTAAAACAAGCAACAGGACGTTCTAACAAATCACGACTGCAAAGAGTAAAGTGTTGTATGGCGTTTGCATTGAAGTTTGGAAATTCATTACCATCATTTTTGTTTCATTT
TCATAGAAATGGATTGGAATAATTATATCGACCAAGGCTCATGTAATGTTCCAGGCTACGTGCTATATCCTAAAAATAGGATAGGATCCTTTATGCATTAGGATGTTCATATTGATCTAATCGAACTCTCCAAATATCTACAGCATAAGCATGCATATTTAGTCTGCCTTTATTTTTTTTAACAAATACCCGTGATTGGA
GAACTTACCAGTCAACTTGTAATTGCAGACCTCAAAGGTTTAGTGTCCTCAAATAGAGTTCTAAACTACAAAATACCAGGGCTATGTAATTTGGAGTTGTATTTTTGAACTCCTCGTTCACATATTAATATTACGCGAATCTCCATTATCTTGATGTGTCATCTTTATGATCGTTG
>TRINITY_DN34734_c0_g1_i2 from sample A6 / Example unspliced isoform:GTCTCGCTGCTTTAATTAACGTTTTGTTCTCTTTCAAACTCGCTTGTCTTCGAACATTTTCTACAAAAATCGAGTCTTTGAAGTCCCGCGAAATTGAAATATGCTGAGATCTCTGATCTCCAACAGATTGCAATGGCAATTTCAGCGCTTCAAACACACAAATGGAAATGCAGATTCCCCAAGCCAAATGCTCAGGAGCA
AATTCATGCAGATGAAGAACAGCAGGAAATCCAAGAAGAAGAAGAACGAAGTCATGGTGGAAGTGCCCGAATCCAGTGCTTACCTGGACACTGCAACAGTTCCCATGGTCCTCACTGCAGTAGCCATTGCACTGTTCATGAAAATGCTCATGATGTACGATGAATCAACGGAGCAGGAGAGAATAGAGCGTAGAGCCAGG
AAAGCTCCTCCAGAACAGGGCTCTGTACGAATGCTTAGTCGTGAAGAATGGGATGCGATTCAAGAAATAAGGCCCAGGACGCCATTCGAGTCTAGAATTGCACGGCCCAACGCTCGCTTGAGGACGGGGGATTCTATAGACCTGGATGACTTCAAAGACTGGAGCATTGATGTTCTCACAGATGCATTTACAAGAGTTGA
GGAGAATGTTCAGCATAACATTAAAGACAAGTGATAACCAATTCATTCTACCTGTTATGACATTCTAAAACAGGGTATATCCAGAAATAGCTAAAACAAGgtatatgtagaaacttgaaatagctagatgtttggaaagcaaggatatggaaatcttgtagcatgattggaggattaaaggcatattagcccagttataa
catcaaactgattcctaggagaaatcattccctgggaactctttcaaattatgctttttggtatttctttcttatttttagttttctatgcaactgtaatttccttttagcaaaactcaccatcatcctgattgttagccctcgaagaaatcattccgtggaacctctctcaaattatgctttggtatttctttcttctt
tttagttttctatgcaaatgtaatttccttttaacaaaggtcaccatcatctggattttcagCAACAGGACGTTCTAACAAATCACGACTGCAAAGAGTAAAGTGTTGTATGGCGTTTGCATTGAAGTTTGGAAATTCATTACCATCATTTTTGTTTCATTTTCATAGAAATGGATTGGAATAATTATATCGACCAAGGC
TCATGTAATGTTCCAGGCTACGTGCTATATCCTAAAAATAGGATAGGATCCTTTATGCATTAGGATGTTCATATTGATCTAATCGAACTCTCCAAATATCTACAGCATAAGCATGCATATTTAGTCTGCCTTTATTTTTTTTAACAAATACCCGTGATTGGAGAACTTACCAGTCAACTTGTAATTGCAGACCTCAAAGG
TTTAGTGTCCTCAAATAGAGTTCTAAACTACAAAATACCAGGGCTATGTAATTTGGAGTTGTATTTTTGAACTCCTCGTTCACATATTAATATTACGCGAATCTCCATTATCTTGATGTGTCATCTTTATGATCGTTG