sp|Q42885|AROC2_SOLLC ----> Chorismate synthase 2, chloroplastic
Intron 1 GTATGTAGTA ... TTTCTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.67 | 4 | 3 | 4 |
| A2 | 15.79 | 8 | 1 | 2 |
| A3 | 21.74 | 9 | 0 | 5 |
| A4 | 42.86 | 2 | 2 | 1 |
| A5 | 4.76 | 10 | 0 | 1 |
| A6 | 7.46 | 31 | 0 | 5 |
| A7 | 11.54 | 23 | 3 | 3 |
| A8 | 10.53 | 17 | 1 | 3 |
| A9 | 16.83 | 42 | 9 | 8 |
| A10 | 11.11 | 20 | 3 | 2 |
>TRINITY_DN132632_c2_g3_i1 from sample A1 / Example spliced isoformAATAGCAGAGAGCTATGGTGGAGGTGATGAGCCTGTAGACACAATAGCGCAACGGCTTGTAGCACTTGGGATTTCTCTGCCCATTCCACCTTTGAGGATAAAAGAGATACCTAATGAAGCAATATATCAGCAGTTTGAGGAAGCTGGCACTGATTTGGGACAACTTCTGTCCCAAAAGAAGTCTATTGAAGCAAAGAAAG
CAGGAATGCCCATAAATGTTGCCAAAGCTATAGCACGTATTTCAGGAGGGCTTTACGTTGTTACAGCTGCGAAAGGCTCATCAAGAGGCGCAATGGTTGCATCATGGGTATCGCAAGCTAGCTTCAAACCATTGGGTATAACGATCGCGGTGGCCAAGGATAGAGCCATTGAATCACTGATGCAGGTGGGAGATACATTT
GTACTCAACTGTTTAGAGGATGGAAACTATGCACCTTTAATGAAGCATTTCCTCAAACGTTTTCCAGCAGGAGCTGATCGTTTTGAAGGAGTTCAATGGGTTCCAGCAGCGTCAAATGGTTCTCCAATCTTAACTGATTGCATTGCATATTTAGAATGTAGAGTTGCGAAGCGCATGGAGACAAGTGACCACTGGATTGC
TTATTCTCATGTCACTGATGGAAATGTCTCCAACTCTCAAGCTCGCACCGCATCTCATCATCGAAAGATTGGAAACTATTATTAAGCTCACCTCATTTTTGGCCTTGTCAAACCCTTTAAGACAATGTGCAACTGACATGGTGCAGCTACACACCTCACTCTAAGACCCTATAACCGTGGCAGTGATACAATATTTAATA
TAATAATAAATTACCACATAAATAAACGTGGTATTAAATGACTGCCGTTTGAATGGCATGGCGATCCTATAGAACGTGGACTATAGGGGCCAAAGTATGCCATATATTGCACAATAGATCTTTGGCCAGAAAAATATTACAGCAATCTTACATGTAGGAAAGACGGC
>TRINITY_DN132632_c2_g3_i2 from sample A1 / Example unspliced isoform:AATAGCAGAGAGCTATGGTGGAGGTGATGAGCCTGTAGACACAATAGCGCAACGGCTTGTAGCACTTGGGATTTCTCTGCCCATTCCACCTTTGAGGATAAAAGAGATACCTAATGAAGCAATATATCAGCAGTTTGAGGAAGCTGGCACTGATTTGGGACAACTTCTGTCCCAAAAGAAGTCTATTGAAGCAAAGAAAG
CAGGAATGCCCATAAATGTTGCCAAAGCTATAGCACGTATTTCAGGAGGGCTTTACGTTGTTACAGCTGCGAAAGGCTCATCAAGAGGCGCAATGGTTGCATCATGGGTATCGCAAGCTAGCTTCAAACCATTGGGTATAACGATCGCGGTGGCCAAGGATAGAGCCATTGAATCACTGATGCAGGTGGGAGATACATTT
GTACTCAACTGTTTAGAGGATGGAAACTATGCACCTTTAATGAAGCATTTCCTCAAACGTTTTCCAGCAGGAGgtatgtagtatataatatgatatatgactgaatctttgcgatatcatccatcctcttctcctcgtatttccatttattaattcattagtatacgtcttttgtcagttaccgactgaatatgaatgaa
ttattttctcctttctttcagCTGATCGTTTTGAAGGAGTTCAATGGGTTCCAGCAGCGTCAAATGGTTCTCCAATCTTAACTGATTGCATTGCATATTTAGAATGTAGAGTTGCGAAGCGCATGGAGACAAGTGACCACTGGATTGCTTATTCTCATGTCACTGATGGAAATGTCTCCAACTCTCAAGCTCGCACCGCA
TCTCATCATCGAAAGATTGGAAACTATTATTAAGCTCACCTCATTTTTGGCCTTGTCAAACCCTTTAAGACAATGTGCAACTGACATGGTGCAGCTACACACCTCACTCTAAGACCCTATAACCGTGGCAGTGATACAATATTTAATATAATAATAAATTACCACATAAATAAACGTGGTATTAAATGACTGCCGTTTGA
ATGGCATGGCGATCCTATAGAACGTGGACTATAGGGGCCAAAGTATGCCATATATTGCACAATAGATCTTTGGCCAGAAAAATATTACAGCAATCTTACATGTAGGAAAGACGGC