NA ----> NA

Intron 1 GTAACTAAAT ... TGTGGACAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	52	6	6	7
A2	54.55	5	4	8
A3	86.96	3	28	12
A4	77.78	3	13	8
A5	64.29	5	7	11
A6	63.64	34	62	57
A7	63.31	71	137	108
A8	70.57	39	112	75
A9	71.32	38	104	85
A10	67.59	47	117	79

>TRINITY_DN44828_c1_g2_i4 from sample A7 / Example spliced isoform

CGGGAAAAGATTCTAAGGTTCCTATCGATTGTCGCCAGGATTTCCAGTCTCGTTGTAAACATTTCAACTTTCTTCAGGCCGTAGAGAAATCAAAGTGATCTGCCTTCAGTCGTGTTGGATGACCTATTCCAAGAATCGCTGCACAGTTCTAAGAGAAAGTGTGCAGAGAGCTCTATATTCTCTCCTTATTTCAGCAGAGA
CAGTACAGGGGACCATACCTGAGCAAAGAATTGGCAGAGAAAGAACCTCCTGAATGTGGA

>TRINITY_DN44828_c1_g2_i1 from sample A7 / Example unspliced isoform:

CGGGAAAAGATTCTAAGGTTCCTATCGATTGTCGCCAGGATTTCCAGTCTCGTTGTAAACATTTCAACTTTCTTCAGGCCGTAGAGAAATCAAAGgtaactaaatttccttgggaatcttctctcagtttctcttcccttcccatctcctgacgagctctctgtcattgattcgatctctgagatctatcgtgtggacaa
gTGATCTGCCTTCAGTCGTGTTGGATGACCTATTCCAAGAATCGCTGCACAGTTCTAAGAGAAAGTGTGCAGAGAGCTCTATATTCTCTCCTTATTTCAGCAGAGACAGTACAGGGGACCATACCTGAGCAAAGAATTGGCAGAGAAAGAACCTCCTGAATGTGGA

Intron 2 GTAACTAAAT ... GATCTCTGAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	52	6	6	7
A2	69.23	2	4	5
A3	95.45	1	28	14
A4	77.78	3	13	8
A5	80	2	7	9
A6	66.47	28	62	49
A7	62.67	70	137	98
A8	75.42	29	112	66
A9	78.67	24	104	73
A10	69.92	40	117	69

>TRINITY_DN44828_c1_g2_i3 from sample A7 / Example spliced isoform

TGCCATTTCATGTTCTCGGGGTTGCTTTCAGGTTCCTATCGATTGTCGCCAGGATTTCCAGTCTCGTTGTAAACATTTCAACTTTCTTCAGGCCGTAGAGAAATCAAAGATCTATCGTGTGGACAAGTGATCTGCCTTCAGTCGTGTTGGATGACCTATTCCAAGAATCGCTGCACAGTTCTAAGAGAAAGTGTGCAGAG
AGCTCTATATTCTCTCCTTATTTCAGCAGAGACAGTACAGGGGACCATACCTGAGCAAAGAATTGGCAGAGAAAGAACCTCCTGAATGTGGA

>TRINITY_DN44828_c1_g2_i1 from sample A7 / Example unspliced isoform:

CGGGAAAAGATTCTAAGGTTCCTATCGATTGTCGCCAGGATTTCCAGTCTCGTTGTAAACATTTCAACTTTCTTCAGGCCGTAGAGAAATCAAAGgtaactaaatttccttgggaatcttctctcagtttctcttcccttcccatctcctgacgagctctctgtcattgattcgatctctgagATCTATCGTGTGGACAA
GTGATCTGCCTTCAGTCGTGTTGGATGACCTATTCCAAGAATCGCTGCACAGTTCTAAGAGAAAGTGTGCAGAGAGCTCTATATTCTCTCCTTATTTCAGCAGAGACAGTACAGGGGACCATACCTGAGCAAAGAATTGGCAGAGAAAGAACCTCCTGAATGTGGA