sp|Q9M9G6|CTF64_ARATH ----> Cleavage stimulating factor 64
Intron 1 GTATGACAGT ... TTGTTAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.89 | 16 | 9 | 4 |
| A2 | 25 | 3 | 1 | 1 |
| A3 | 44 | 7 | 8 | 3 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 23.81 | 8 | 5 | 0 |
| A6 | 37.5 | 5 | 0 | 6 |
| A7 | 41.38 | 17 | 16 | 8 |
| A8 | 31.09 | 41 | 20 | 17 |
| A9 | 30.61 | 17 | 6 | 9 |
| A10 | 36.36 | 14 | 8 | 8 |
>TRINITY_DN48961_c1_g1_i13 from sample A7 / Example spliced isoformCAAGTCTGGGGAGTCTACTTCAACCGCCACTACCACAACAACCAAGGCCATTGTTGCAATCTCTTCCACCTGCAGGTCAGGTGCAAAATCAGCCAACTCAGAAATTAGAATATGGGGTTCAAACCATCAAGTGTGCCACACCAACTGTCATCAGAGGCACCTTTTCGGGGTCAGATACGTTAGCACAAAATCAAATTCAA
ACCGGGAAGTAAGCCCAGATGCAAGGTCAGGCCCAGCTTCAGATTCAACCTGGGAAGCAATTACAGCAATCTCAACCCCAAAACATTCCAATGTGGCAGTTAACGCAACCACCTCCAGTGCAGCCTTCAGTTCAGCAGATTCAACCTGGGAAGCAAGCCCAGATGCAGGTTGGGAAGCACGGTCAGGCCCACTGTTACAA
CAATCTCGACCCCAAAACATTCCAATGCAGCAGTTATCCAAACATCTCAATCTCAAGTGCCACAGAGTATTGCAGTCTCTACAATAGGCATCTCAAAGTTTGAATTTGCTAATGCAAACTCCAATGCAGTCTCCACACACTGTACAGCTTCAAGTTCATCATATTCATTAAGGTCAGCCACAACAACCTCCCAACTAGCC
AAGTCTGGGGTTCTACATCAACCGCCACTAACCACAACAACCAAGGCCATTGTCAGCCTCAACAACCTTCCAACCAGCCGTTGCAATCTCTTCCACCTGCAGGTCAGGTGCAAAATCAGCCAACTCAGAATATGGGGTTCAAAGTTTCAAACTGTCAAGTGTGCCACACCAACCATCAAGTGTGCCACACCAACTGTCAA
CACAAGCACCTTTTCAGTCAGGAAACCATCCTCAGAATACCTCCTGTCATCAGAGGCACCTTTTCAGTCTGGTTGACAGCTGGTCGACAGGGTCAGATACGGGTCAGATATGTTTAGCACAAAATCAGATTCAAATGGGGAAGCAAGCCCAGATGCAGGTTGGGTGGCATGGTCAGGCCCAACTGTTACAACAATCTCAA
CCCCAAAACATTCCAAATTGGAAGTTAATGCAACCACCTCCAGTGCAGCCTTCAGTTCAGGTTATCCAACCATCTCATTCTCAAGAGCCAGAGTATTGCAGTCTCTACAATATTAGCACAAAATCAGATTCCAACCGGGAAGCAAGGCCGGATGCAGGTTGGGCAGCATGGTAAGGCCCAACTGTTACAGCAATTTCAAC
CCCAAAACATTCCAATGTGGCAGTTAATGCAACCGCCTCCAGTGCAGCCTTCATTTCAGGTTATCCAGCCGTCTCAATCTCAAATGCCACAGAGTATTGCAGTCTCTGCAATAGGTATCTCAAAGTTTGAATTTGCCAGTACGACTCCAATGCAGTCTCCACACATTGTACATACTACAGCATCAAGTTTTTCCTATTCT
TTCAGGCATCTCAAAGTTTGAATTTTCCAGTACAAACTTCATTGCAGTCTCCACACACTGTACAAGTTCCTCCTATTCATTCAGGTCAGCCTCAATAACTTTCCAACTAGCCAAGTCTGGGGAGTCTACATCAACCGTCACTACCACAGCACCCAAGGCCATTGTTGCACTCTCTTCTACCTGCAGGTCAGGTGCAAAAT
CAGCCAACTCAGAATATGGGGTTCAAACGATCAAGTGTGCCACAGCAACTGTCATCAGAGGCACCTTTTCAGCCAGGAAACCATCCTCAGAGTGCATTGGGGATTCCTTTCCAGAAACACACCCAACCTCCACCGCCCAATCTACCACGGAAGACTTATCAGGTAAGTTGGTTCTAAAAAGCAGTTTAGGTCAAAAACTT
TTTCTCCAATTGGCATTCTGAGACTCCTTAGATTTTGACTATTTGGAGATAAGGGATTTTTAGTACAGTTGGCACAGCTCTACAGGCAGTCTCTGCCGCAATTTGCTGAAGCACAAGCCCAAGCAACTTTTTAAGCAATGCTGGTCCCCTCCAATTAGGTGCCCTCCGAGTGGGAAGAGGATCTAATAATTTGGTCCAAG
GATTGGGTGGCATTCCTGATGTATCCTGGTGTCAGGTCCCACAATCAGCT
>TRINITY_DN48961_c1_g1_i7 from sample A7 / Example unspliced isoform:CAAGTCTGGGGAGTCTACTTCAACCGCCACTACCACAACAACCAAGGCCATTGTTGCAATCTCTTCCACCTGCAGGTCAGGTGCAAAATCAGCCAACTCAGAAATTAGAATATGGGGTTCAAACCATCAAGTGTGCCACACCAACTGTCATCAGAGGCACCTTTTCGGGGTCAGATACGTTAGCACAAAATCAAATTCAA
ACCGGGAAGTAAGCCCAGATGCAAGGTCAGGCCCAGCTTCAGATTCAACCTGGGAAGCAATTACAGCAATCTCAACCCCAAAACATTCCAATGTGGCAGTTAACGCAACCACCTCCAGTGCAGCCTTCAGTTCAGCAGATTCAACCTGGGAAGCAAGCCCAGATGCAGGTTGGGAAGCACGGTCAGGCCCACTGTTACAA
CAATCTCGACCCCAAAACATTCCAATGCAGCAGTTATCCAAACATCTCAATCTCAAGTGCCACAGAGTATTGCAGTCTCTACAATAGGCATCTCAAAGTTTGAATTTGCTAATGCAAACTCCAATGCAGTCTCCACACACTGTACAGCTTCAAGTTCATCATATTCATTAAGGTCAGCCACAACAACCTCCCAACTAGCC
AAGTCTGGGGTTCTACATCAACCGCCACTAACCACAACAACCAAGGCCATTGTCAGCCTCAACAACCTTCCAACCAGCCGTTGCAATCTCTTCCACCTGCAGGTCAGGTGCAAAATCAGCCAACTCAGAATATGGGGTTCAAAGTTTCAAACTGTCAAGTGTGCCACACCAACCATCAAGTGTGCCACACCAACTGTCAA
CACAAGCACCTTTTCAGTCAGGAAACCATCCTCAGAATACCTCCTGTCATCAGAGGCACCTTTTCAGGGTCAGATACATGTTTAGCACAAAATCAGATTCAAATGGGGAAGCAAGCCCAGATGCAGGTTGGGTGGCATGGTCAGGCCCAACTGTTACAACAATCTCAACCCCAAAACATTCCAAATTGGAAGTTAATGCA
ACCACCTCCAGTGCAGCCTTCAGTTCAGGTTATCCAACCATCTCATTCTCAAGAGCCAGAGTATTGCAGTCTCTACAATATTAGCACAAAATCAGATTCCAACCGGGAAGCAAGGCCGGATGCAGGTTGGGCAGCATGGTAAGGCCCAACTGTTACAGCAATTTCAACCCCAAAACATTCCAATGTGGCAGTTAATGCAA
CCGCCTCCAGTGCAGCCTTCATTTCAGGTTATCCAGCCGTCTCAATCTCAAATGCCACAGAGTATTGCAGTCTCTGCAATAGGTATCTCAAAGTTTGAATTTGCCAGTACGACTCCAATGCAGTCTCCACACATTGTACATACTACAGCATCAAGTTTTTCCTATTCTTTCAGGCATCTCAAAGTTTGAATTTTCCAGTA
CAAACTTCATTGCAGTCTCCACACACTGTACAAGTTCCTCCTATTCATTCAGGTCAGCCTCAATAACTTTCCAACTAGCCAAGTCTGGGGAGTCTACATCAACCGTCACTACCACAGCACCCAAGGCCATTGTTGCACTCTCTTCTACCTGCAGGTCAGGTGCAAAATCAGCCAACTCAGAATATGGGGTTCAAACGATC
AAGTGTGCCACAGCAACTGTCATCAGAGGCACCTTTTCAGgtatgacagttgatgccattagatacctttattcattcagttcagttgagggggagtgatgagcaagctatacatattatatcttcaggcttgatgtcattaacaaactgtgttggtgaggagccccttcgtattagtttggaagatttaaggtatacgt
tttcatgggtttttcagctgtttgaaatgatgctttttgttagcagCCAGGAAACCATCCTCAGAGTGCATTGGGGATTCCTTTCCAGAAACACACCCAACCTCCACCGCCCAATCTACCACGGAAGACTTATCAGGTAAGTTGGTTCTAAAAAGCAGTTTAGGTCAAAAACTTTTTCTCCAATTGGCATTCTGAGACTC
CTTAGATTTTGACTATTTGGAGATAAGGGATTTTTAGTACAGTTGGCACAGCTCTACAGGCAGTCTCTGCCGCAATTTGCTGAAGCACAAGCCCAAGCAACTTTTTAAGCAATGCTGGTCCCCTCCAATTAGGTGCCCTCCGAGTGGGAAGAGGATCTAATAATTTGGTCCAAGGATTGGGTGGCATTCCTGATGTATCC
TGGTGTCAGGTCCCACAATCAGCT