NA ----> NA
Intron 1 GTAAGAGTGC ... GTTTTGCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 88.89 | 2 | 24 | 8 |
| A2 | 85.45 | 2 | 19.5 | 4 |
| A3 | 77.78 | 2 | 10 | 4 |
| A4 | 57.24 | 6.5 | 11 | 6 |
| A5 | 100 | 0 | 8.5 | 2 |
| A6 | 52.61 | 15.5 | 28.5 | 6 |
| A7 | 81.23 | 13.5 | 82 | 35 |
| A8 | 74.02 | 31.5 | 139.5 | 40 |
| A9 | 79.84 | 12.5 | 60 | 39 |
| A10 | 87.3 | 6 | 61.5 | 21 |
>TRINITY_DN43808_c1_g2_i8 from sample A6 / Example spliced isoformAGTTATTTAAACAGATGAAAGATAGTAGTCATGTCCCTAATATGATTACACATACCATCCTTGTGGATAAACTGAGCAAGCAAGGCACACCCCAAGAAAATAGACTACTGTACGAGATCTTAGAAAAGGTTTGACACTACACTGTACAGCTGTGATATATTCAACTGTAAATAATAGGTAGCCTCTATAAAGATATTGCT
GAAACACACCTTGCAAGATTCAGTAATAGGGAGCAAATTGCAATTGATAAAATGCAGAGGTAATTATGTTAACAATGCAGCGGGCAGGATATCTGAAACAGGCTTGGTGGCTGAGCTTGATGAAGTGACCCGAGTCGAAATTCCTGTGTTTAGTGGGTTGTCGTTTGATAAGCTGGATCTTGCAAATTTCAACAGTGGTG
GTTAACACATTTGATTTGATTTCTCATATCATAGTTTCTTCCAAAAGAGAATTTATCAATATTTCTATAAGGTTAGTTATTCATCATGAAGTGGGCTTGGCCGACCCACAAGAAATGCTAATGAATAACTTACTATGCCTTATTCTTGTAATTGAAGAAATGGAAGAATTTTGCTTCATTACATATGTCATTGGGCATTT
CTTCTCATTCCAGGGATGATAACTTGGGTAAACCAAATTTTTCAAGGCTCAAAGTCAATACAATGATACATCCATTAAGATCTCAATAAGTCATTTGTGGGAATTGGTCTTGGGTGAGGAGGATAACACTTTTCTCAATCACCCAGGCTAGATCCAGTTGACATGGATGAATTTTGCTTATTGTAACTGTAAAAGAAAAT
AGGTCTTGTAACTGAAAATTATGTTATTAAAGAAAGCAACACTATTAGTTGACAGGATCTTTTCTCTTTTGAAAGAAGCAAGAAGCAACCTGTGAGTTGGGGGAGAGGATTTTGGTGAGAAAAGTTTAGAAGATGAGACTTCAAGGCGTTCCCCTCCCTTGGTCATGTAAATATTCCTTTTTGAAAGGAACTTTTCAGTT
TTGTGTGGGGTTTAGTGAATTGTGTTAGTTGTTAGGTGCCTTATTGCCTACCTTTTCCACTGGCATTTTCCTGCTATTTGTTCAATACTTTTCTATCAAGAACTAACACAATTGTGGTAGAATGTCTGTTTTCAATATTGTTATAGATGCATAATAATAGCTGTTGATCTCTGATGTTTCT
>TRINITY_DN43808_c1_g2_i3 from sample A6 / Example unspliced isoform:AGTTATTTAAACAGATGAAAGATAGTAGTCATGTCCCTAATATGATTACACATACCATCCTTGTGGATAAACTGAGCAAGCAAGGCACACCCCAAGAAAATAGACTACTGTACGAGATCTTAGAAAAGGTTTGACACTACACTGTACAGCTGTGATATATTCAACTGTAAATAATAGGTAGCCTCTATAAAGATATTGCT
GAAACACACCTTGCAAGATTCAGTAATAGGGAGCAAATTGCAATTGATGAAATGCAGAGGTAATTATGTTAACAATGCAGCGGGCAGGATATCTGAAACAGGCTTGGTGGCTGAGCTTGATGAAGTGACCCGAGTCGAAATTCCgtaagagtgctcttctttgtatttaatcttaaacatatttggtttaatgtttagtg
tgccgcacatcttaatgaaatgtaccagctgtttaatctaaagtgggtttggcctagcaattagtttgtttcaacttgcaaagtgccccaggtaaatttcatgatattgctcacattactaatctcgaattgttttgctagTGTGTTTAGTGGGTTGTCGTTTGATAAGCTGGATCTTGCAAATTTCAACAGTGGTGGTT
AACACATTTGATTTGATTTCTCATATCATAGTTTCTTCCAAAAGAGAATTTATCAATATTTCTATAAGGTTAGTTATTCATCATGAAGTGGGCTTGGCCGACCCACAAGAAATGCTAATGAATAACTTACTATGCCTTATTCTTGTAATTGAAGAAATGGAAGAATTTTGCTTCATTACATATGTCATTGGGCATTTCTT
CTCATTCCAGGGATGATAACTTGGGTAAACCAAATTTTTCAAGGCTCAAAGTCAATACAATGATACATCCATTAAGATCTCAATAAGTCATTTGTGGGAATTGGTCTTGGGTGAGGAGGATAACACTTTTCTCAATCACCCAGGCTAGATCCAGTTGACATGGATGAATTTTGCTTATTGTAACTGTAAAAGAAAATAGG
TCTTGTAACTGAAAATTATGTTATTAAAGAAAGCAACACTATTAGTTGACAGGATCTTTTCTCTTTTGAAAGAAGCAAGAAGCAACCTGTGAGTTGGGGGAGAGGATTTTGGTGAGAAAAGTTTAGAAGATGAGACTTCAAGGCGTTCCCCTCCCTTGGTCATGTAAATATTCCTTTTTGAAAGGAACTTTTCAGTTTTG
TGTGGGGTTTAGTGAATTGTGTTAGTTGTTAGGTGCCTTATTGCCTACCTTTTCCACTGGCATTTTCCTGCTATTTGTTCAATACTTTTCTATCAAGAACTAACACAATTGTGGTAGAATGTCTGTTTTCAATATTGTTATAGATGCATAATAATAGCTGTTGATCTCTGATGTTTCT