NA ----> NA

Intron 1 GTGAGTACGT ... TGCTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	50	2	2	2
A2	100	0	1	0
A3	100	0	0	1
A4	100	0	2	0
A5	-1	0	0	0
A6	29.41	6	1	4
A7	47.06	18	11	21
A8	32.08	18	9	8
A9	40	12	12	4
A10	23.53	13	5	3

>TRINITY_DN47938_c1_g4_i1 from sample A7 / Example spliced isoform

TTGGAGATGAGAAAAACAAAGGCATGCTGAGGAGATTCTGAAGGAAGGAGAAGAGCTCCAAGTCTTCAAAAGCAAGGATGAAGGAAGGAGAATTTATGGCAAGGGAGGAGGCACTCACACCAGGATTCCTGATGGTAAAAAGAAACCAAATCTTACAACGGAGCTTCAATTTCTGCGGGAACCATAGATGAATGCGCTGA
GTGCGGTAATGCATCTGCGTTTTCATTTTCGGAATCACAGGGTTTTCTTGGTTGAATGTTGTATGGGGATGAGGCTTTTCAGTTTTAGCATTGATTACTAGATGATCGACTACTCTATTGGTCATGCGTTTTATTCCCAGAATTTACTGTTGTACGGTGAAGTGGTTTTGGTTTTTGGTGAAGGCGGATTGATGAAGGAG
TTTAATGCTAGATGGTGTCGGTAGTCTCATTTTATGCTATATTGGGTGACGGCCAAAAGCAATTTGATTCCCAGCAACAGATTAACCCTGTCGAAATTGTTTAAAAAATTCATTTTCTCTTGCCAAAATTAGGGTTTGGAATCAAATTTTGATTTTTGGATTTAAAAAGAATTCCAAGTTGGCATAGCTTGCATAGTTTG
GATTCAAGAAAGAATTAAAAATTCATTGAATTTTTTTTGCATTTTAAATTTTGAAAAACTTGGAATTGTCTTGCCTAATTGGAG

>TRINITY_DN47938_c1_g4_i2 from sample A7 / Example unspliced isoform:

TTGGAGATGAGAAAAACAAAGGCATGCTGAGGAGATTCTGAAGGAAGGAGAAGAGCTCCAAGTCTTCAAAAGCAAGGATGAAGGAAGGAGAATTTATGGCAAGGGAGGAGGCACTCACACCAGGATTCCTGATGGTAAAAAGAAACCAAATCTTACAACGGAGCTTCAATTTCTGCGGGAACCATAGATGAATGCGCTGA
GTGCGGTAATGCATCTGCGTTTTCATTTTCGGAATCACAGGGTTTTCTTGGTTGAATGTTGTATGGGGATGAGGCTTTTCAGTTTTAGCATTGATTACTAGATGgtgagtacgtttttcattcgaggctgtatgatcatggattgactgctgattagttcgctgctgacttttgaatgcgttttccattccaaaatcaag
tgttgtatggtgaatgctttgcagATCGACTACTCTATTGGTCATGCGTTTTATTCCCAGAATTTACTGTTGTACGGTGAAGTGGTTTTGGTTTTTGGTGAAGGCGGATTGATGAAGGAGTTTAATGCTAGATGGTGTCGGTAGTCTCATTTTATGCTATATTGGGTGACGGCCAAAAGCAATTTGATTCCCAGCAACAG
ATTAACCCTGTCGAAATTGTTTAAAAAATTCATTTTCTCTTGCCAAAATTAGGGTTTGGAATCAAATTTTGATTTTTGGATTTAAAAAGAATTCCAAGTTGGCATAGCTTGCATAGTTTGGATTCAAGAAAGAATTAAAAATTCATTGAATTTTTTTTGCATTTTAAATTTTGAAAAACTTGGAATTGTCTTGCCTAATT
GGAG