sp|Q9LS42|CASP_ARATH ----> Protein CASP
Intron 1 GTAAGCAAGT ... AATCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.71 | 47 | 84 | 81 |
| A2 | 58.17 | 64 | 88 | 90 |
| A3 | 67.66 | 38 | 81 | 78 |
| A4 | 59.32 | 24 | 35 | 35 |
| A5 | 60 | 22 | 31 | 35 |
| A6 | 63.64 | 8 | 14 | 14 |
| A7 | 60 | 82 | 125 | 121 |
| A8 | 59.53 | 86 | 130 | 123 |
| A9 | 62.43 | 65 | 111 | 105 |
| A10 | 62.66 | 73 | 130 | 115 |
>TRINITY_DN35239_c0_g1_i1 from sample A6 / Example spliced isoformGAACCAACAGGCCACTGTTCGAAGGCTAGAGGAACGCAATCGGCAATTAGAGCAACAGATGGAAGAGAAGGTGAAGGAAATTGTAGAGATCAAGCAGCGAACCTTGGCTGAAGAGAACCAGAAAACTCTTGAGGTTTTGAAAGAAAGGGAGATGCTACTACAAGAACAGTTGCGAGCAGCCAAGGCAAGTGTTTCAAATA
TGCAGAGATTACATGATTTTGGCCAAAGTCAGTTATTTGAGTTCCGAGCACAATCAGAGGAGGAGAGAGCAGCAAAGCAATCGGAACTCAATCTTCTTACAGATGAGGTTGATCGAGCTCAGGCACGATTGTTAAGCCTGGAAAGGGAAAAGGACCAGTTGCGATCCCAACTTCAGGTGGTTCACAGTCAGGAAACTGAA
CACAAGGAAAGGCAACAATTATTGAGGGGATGCAAAAGGAGCTGCAGGAAAGGCCAACAGCTAAACAAGTGGAAGACCTTCGCCGTGGGTTATAATTCTATTGAGGCTGAAGATTGGGAGGTAGCTACGAGAGGCGAGGACATGACCAAATTAGAGACATTGTTACTTGACAAAAATAGGAAGATGGAACATGAGCTAAC
TCAATTGAAGGTTAAACTTTCTGAAAAGACAAGTGTAGCTGAGGCTTCCGAAGCTAAAGTGAAAGAGCTTGGTATGAAGGTGGATGAACAACAGAAACTAATTTCAAAGCTAGAAGAAGACATATTAAAGGGATATAGCTCAGTGGATCGAAGATTGACAAAAGCAGATGATTGGGACCTGCCGGAGCTTGGAATTTCAG
AAATTCTTGAGAAAACTGAATTGAGAAAGGGTCAAGCAGATGAGGAGCAGAATTCAATGCTACAGGTGATTTGCAGCCAGCGTGACAGATTCCGGCAACGCCTAAGGGAAGCTGAAGAGGATCTAAGACTGGCTCAAGAGAAAAACAAGGCCCTTGTAGCAGATTTGGAAAAGAGTAAAGCAGAGAGTGTTAAGCTGTAT
GAGAAAATTCGTTACATACAAGATTATACAAAGGATTGGCCTCTCTCCCGAGGACAGAGAAAGCGTGCTGATGATGTAGAGAGTGGGTTCAGTTCAGATATAGAATCGAAGTACAAGAAGATATATGAAGATGACATAAACCCCTTTGCTGCTTTTTCAAAGAAGGAAAAGGAGCGTAGATACAAGGAACTCGGAATAAG
AGACAAAATTACACTTACAAGTGGGCGTTTCCTTCTTGGCAACAAATATGCCCGGACTTTTATCTTCTTCTACTCCATAGGTCTTCATCTTCTTGTTTTTACCAGTCTATATAGAATGTCAGCTCTAAGTTACCACAGCATTGCCAAAAGTGGAGATTTGGAATCTGAGAAGAATGCTGTAAAATTTCTTAACATGACCA
TGCATCATTCTACTTAAGATAAACTATAGAACTGAGAGCCACAACTAATTTTGGCCAAATCTGGACCCAAGTCCATTGTAGTCGTATATGTTGACTACTGATTTTCTTGGGACTTGCCTCCTGCAAGTATCAAGTTCTTTGATCTGGAGATCTGTAAAGCAGCTTTGTATATAATGTTGAATATGATCAGCAGTTAGTAG
ATCTGAAGTGTAATGTCACTTATAGAATATATTGGTTCCAGTGAACTAAGATCAAACAAAGAAGATTTTGGAATCAAGTTCAATTAAGTTGAAATTCAGTGCTATGCAGAAATTCATAAATAATGGATTCTGCATTTATTGGTTTTACTGCTGCTATGGTGTATAATCATATTCATTATTCTTTAGAAATTTCATTTGAA
GTGTTCTTAAATTTTAAGGTCTTGAAGAGATCATCTGCTGTGTTTTTTATTCAAACTAGCAAGCTGCTTGATTGTAACTGGAATTTCTAAAATTTGTTCGGTGAAGCTGTGTTGTTTGATACAATTTTATTA
>TRINITY_DN35239_c0_g1_i2 from sample A6 / Example unspliced isoform:GAACCAACAGGCCACTGTTCGAAGGCTAGAGGAACGCAATCGGCAATTAGAGCAACAGATGGAAGAGAAGGTGAAGGAAATTGTAGAGATCAAGCAGCGAACCTTGGCTGAAGAGAACCAGAAAACTCTTGAGGTTTTGAAAGAAAGGGAGATGCTACTACAAGAACAGTTGCGAGCAGCCAAGGCAAGTGTTTCAAATA
TGCAGAGATTACATGATTTTGGCCAAAGTCAGTTATTTGAGTTCCGAGCACAATCAGAGGAGGAGAGAGCAGCAAAGCAATCGGAACTCAATCTTCTTACAGATGAGGTTGATCGAGCTCAGGCACGATTGTTAAGCCTGGAAAGGGAAAAGGACCAGTTGCGATCCCAACTTCAGGTGGTTCACAGTCAGGAAACTGAA
CACAAGGAAAGAGAAGACCTGGATGCAAGCAACACTCTTGAGGCTTCTTTAAGTGCAAAGGAGAAGATCATTTCAGAGCTGCATACAGAGCTTCATAAATTGGAAACAGCATTGTCAAATGAGCGGGAACAACACTTAATTGAGATTAAGAAGCTGAATACTTTTCTAGTTGAAAAGGCAACAATTATTGAGGGGATGCA
AAAGGAGCTGCAGGAAAGGCCAACAGCTAAACAAGTGGAAGACCTTCgtaagcaagttaaaatcttacagGCCGTGGGTTATAATTCTATTGAGGCTGAAGATTGGGAGGTAGCTACGAGAGGCGAGGACATGACCAAATTAGAGACATTGTTACTTGACAAAAATAGGAAGATGGAACATGAGCTAACTCAATTGAAGG
TTAAACTTTCTGAAAAGACAAGTGTAGCTGAGGCTTCCGAAGCTAAAGTGAAAGAGCTTGGTATGAAGGTGGATGAACAACAGAAACTAATTTCAAAGCTAGAAGAAGACATATTAAAGGGATATAGCTCAGTGGATCGAAGATTGACAAAAGCAGATGATTGGGACCTGCCGGAGCTTGGAATTTCAGAAATTCTTGAG
AAAACTGAATTGAGAAAGGGTCAAGCAGATGAGGAGCAGAATTCAATGCTACAGGTGATTTGCAGCCAGCGTGACAGATTCCGGCAACGCCTAAGGGAAGCTGAAGAGGATCTAAGACTGGCTCAAGAGAAAAACAAGGCCCTTGTAGCAGATTTGGAAAAGAGTAAAGCAGAGAGTGTTAAGCTGTATGAGAAAATTCG
TTACATACAAGATTATACAAAGGATTGGCCTCTCTCCCGAGGACAGAGAAAGCGTGCTGATGATGTAGAGAGTGGGTTCAGTTCAGATATAGAATCGAAGTACAAGAAGATATATGAAGATGACATAAACCCCTTTGCTGCTTTTTCAAAGAAGGAAAAGGAGCGTAGATACAAGGAACTCGGAATAAGAGACAAAATTA
CACTTACAAGTGGGCGTTTCCTTCTTGGCAACAAATATGCCCGGACTTTTATCTTCTTCTACTCCATAGGTCTTCATCTTCTTGTTTTTACCAGTCTATATAGAATGTCAGCTCTAAGTTACCACAGCATTGCCAAAAGTGGAGATTTGGAATCTGAGAAGAATGCTGTAAAATTTCTTAACATGACCATGCATCATTCT
ACTTAAGATAAACTATAGAACTGAGAGCCACAACTAATTTTGGCCAAATCTGGACCCAAGTCCATTGTAGTCGTATATGTTGACTACTGATTTTCTTGGGACTTGCCTCCTGCAAGTATCAAGTTCTTTGATCTGGAGATCTGTAAAGCAGCTTTGTATATAATGTTGAATATGATCAGCAGTTAGTAGATCTGAAGTGT
AATGTCACTTATAGAATATATTGGTTCCAGTGAACTAAGATCAAACAAAGAAGATTTTGGAATCAAGTTCAATTAAGTTGAAATTCAGTGCTATGCAGAAATTCATAAATAATGGATTCTGCATTTATTGGTTTTACTGCTGCTATGGTGTATAATCATATTCATTATTCTTTAGAAATTTCATTTGAAGTGTTCTTAAA
TTTTAAGGTCTTGAAGAGATCATCTGCTGTGTTTTTTATTCAAACTAGCAAGCTGCTTGATTGTAACTGGAATTTCTAAAATTTGTTCGGTGAAGCTGTGTTGTTTGATACAATTTTATTA
Intron 2 GTTGTAAGGC ... TGGATTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.28 | 101 | 4 | 36 |
| A2 | 28.09 | 64 | 6 | 25 |
| A3 | 27.86 | 101 | 10 | 39 |
| A4 | 27.66 | 34 | 8 | 13 |
| A5 | 18.18 | 27 | 3 | 6 |
| A6 | 25 | 9 | 1 | 3 |
| A7 | 20.87 | 91 | 6 | 24 |
| A8 | 28.21 | 56 | 7 | 22 |
| A9 | 24.49 | 74 | 11 | 24 |
| A10 | 30.43 | 112 | 3 | 49 |
>TRINITY_DN100025_c0_g1_i4 from sample A4 / Example spliced isoformGGGACCTTACAGCTGATACGGGGGACTCGAACATTTGCTCAGAGCGTACGTTAAATTTCATTATCGAACGGAGATCCGTGTGTTATCTTGTCTATATGTAGATATCCCCTGGTCCAGAACACTGATAGAGTGAGATCCACATTGCTAAAGGGTTTCAGGGATCGAATTGGGGTAAAGCTACAATGGAAGCTTACGAGGAG
CCCAGCGAGGGAGCTGCAGACAAGGACAAACCCATAAATTCCTCTTCATATTCTTCATCATCTCCGATCGCTGTCGTTTTAAGCTTCTGGAAAGATTTTGACCTTGAGAGTGAGAGAAGCAAGCTGGATGAGCAGGGGCTGAAAATAGCTGAAAATCAGGAAACTAGTCTGAAGAATAGGCGGAAACTTGCTGAAAACAC
ACGAGATTTCAAGAAAGCACCAAATGAGGAAAAATTAAGCTTGTTCAATTCTTTACTCAAAGGATATCAAGAAGAGGTGGATAATATTACAAAGCGAGCAAAGTTTGGAGAAAATGCTTTCTTGAATATTTATCAGAAGCTATATGAAGCTCCTGACCCATGCCAAGCTCTTGCTTCAGCCACCGAGCTAGCTTCAAAGG
TTTCTGAACTTGAAACTGAGAATCGTAAAATGAAGCATGAGCTTGAGGATTTTAGGGCAGAAGCTGCTCATCTAAGGAACCAACAGGCCACTGTTCGAAGGCTAGAGGAACGCAATCGGCAATTAGAGCAACAGATGGAAGAGAAGGTGAAGGAAATTGTAGAGATCAAGCAGCGAACCTTGGCTGAAGAGAACCAGAAA
ACTCTTGAGGTTTTGAAAGAAAGGGAGATGCTACTACAAGAACAGTTGCGAGCAGCCAAGGCAAGTGTTTCAAATATGCAGAGATTACATGATTTTGGCCAAAGTCAGTTATTTGAGTTCCGAGCACAATCAGAGGAGGAGAGAGCAGCAAAGCAATCGGAACTCAATCTTCTTACAGATGAGGTTGATCGAGCTCAGGC
ACGATTGTTAAGCCTGGAAAGGGAAAAGGACCAGTTGCGATCCCAACTTCAGGTGGTTCACAGTCAGGAAACTGAACACAAGGAAAGAGAAGACCTGGATGCAAGCAACACTCTTGAGGCTTCTTTAAGTGCAAAGGAGAAGATCATTTCAGAGCTGCATACAGAGCTTCATAAATTGGAAACAGCATTGTCAAATGAGC
GGGAACAACACTTAATTGAGATTAAGAAGCTGAATACTTTTCTAGTTGAAAAGGCAACAATTATTGAGGGGATGCAAAAGGAGCTGCAGGAAAGGCCAACAGCTAAACAAGTGGAAGACCTTCGTAAGCAAGTTAAAATCTTACAGGCCGTGGGTTATAATTCTATTGAGGCTGAAGATTGGGAGGTAGCTACGAGAGGC
GAGGACATGACCAAATTAGAGACATTGTTACTTGACAAAAATAGGAAGATGGAACATGAGCTAACTCAATTGAAGGTTAAACTTTCTGAAAAGACAAGTGTAGCTGAGGCTTCCGAAGCTAAAGTGAAAGAGCTTGGTATGAAGGTGGATGAACAACAGAAACTAATTTCAAAGCTAGAAGAAGACATATTAAAGGGATA
TAGCTCAGTGGATCGAAGATTGACAAAAGCAGATGATTGGGACCTGCCGGAGCTTGGAATTTCAGAAATTCTTGAGAAAACTGAATTGAGAAAGGGTCAAGCAGATGAGGAGCAGAATTCAATGCTACAGGTGATTTGCAGCCAGCGTGACAGATTCCGGCAACGCCTAAGGGAAGCTGAAGAGGATCTAAGACTGGCTC
AAGAGAAAAACAAGGCCCTTGTAGCAGATTTGGAAAAGAGTAAAGCAGAGAGTGTTAAGCTGTATGAGAAAATTCGTTACATACAAGATTATACAAAGGATTGGCCTCTCTCCCGAGGACAGAGAAAGCGTGCTGATGATGTAGAGAGTGGGTTCAGTTCAGATATAGAATCGAAGTACAAGAAGATATATGAAGATGAC
ATAAACCCCTTTGCTGCTTTTTCAAAGAAGGAAAAGGAGCGTAGATACAAGGAACTCGGAATAAGAGACAAAATTACACTTACAAGTGGGCGTTTCCTTCTTGGCAACAAATATGCCCGGACTTTTATCTTCTTCTACTCCATAGGTCTTCATCTTCTTGTTTTTACCAGTCTATATAGAATGTCAGCTCTAAGTTACCA
CAGCATTGCCAAAAGTGGAGATTTGGAATCTGAGAAGAATGCTGTAAAATTTCTTAACATGACCATGCATCATTCTACTTAAGATAAACTATAGAACTGAGAGCCACAACTAATTTTGGCCAAATCTGGACCCAAGTCCATTGTAGTCGTATATGTTGACTACTGATTTTCTTGGGACTTGCCTCCTGCAAGTATCAAGT
TCTTTGATCTGGAGATCTGTAAAGCAGCTTTGTATATAATGTTGAATATGATCAGCAGTTAGTAGATCTGAAGTGTAATGTCACTTATAGAATATATTGGTTCCAGTGAACTAAGATCAAACAAAGAAGATTTTGGAATCAAGTTCAATTAAGTTGAAATTCAGTGCTATGCAGAAATTCATAAATAATGGATTCTGCAT
TTATTGGTTTTACTGCTGCTATGGTGTATAATCATATTCATTATTCTTTAGAAATTTCATTTGAAGTGTTCTTAAAAAAAAAAAAAACAAA
>TRINITY_DN100025_c0_g1_i1 from sample A4 / Example unspliced isoform:GGGACCTTACAGCTGATACGGGGGACTCGAACATTTGCTCAGAGCGTACGTTAAATTTCATTATCGAACGGAGATCCGTGTGTTATCTTGTCTATATGTAGATATCCCCTGGTCCAGAACACTGATAGAGTGAGATCCACATTGCTAAAGGGTTTCAGGGATCGAATTGGGGTAAAGCTACAATGGAAGCTTACGAGGAG
CCCAGCGAGGGAGCTGCAGACAAGGACAAACCCATAAATTCCTCTTCATATTCTTCATCATCTCCGATCGCTGTCGTTTTAAGCTTCTGGAAAGATTTTGACCTTGAGAGTGAGAGAAGCAAGCTGGATGAGCAGGGGCTGAAAATAGCTGAAAATCAGGAAACTAGTCTGAAGAATAGGCGGAAACTTGCTGAAAACAC
ACGAGATTTCAAGAAAGCACCAAATGAGGAAAAATTAAGCTTGTTCAATTCTTTACTCAAAGGATATCAAGAAGAGGTGGATAATATTACAAAGCGAGCAAAGTTTGGAGAAAATGCTTTCTTGAATATTTATCAGAAGCTATATGAAGCTCCTGACCCATGCCAAGCTCTTGCTTCAGCCACCGAGCTAGCTTCAAAGG
TTTCTGAACTTGAAACTGAGAATCGTAAAATGAAGCATGAGCTTGAGGATTTTAGGGCAGAAGCTGCTCATCTAAGGAACCAACAGGCCACTGTTCGAAGGCTAGAGGAACGCAATCGGCAATTAGAGCAACAGATGGAAGAGAAGGTGAAGGAAATTGTAGAGATCAAGCAGCGAACCTTGGCTGAAGAGAACCAGAAA
ACTCTTGAGGTTTTGAAAGAAAGgttgtaaggcaaagccatgagaacatttatatttttctgttgcaagctaaaaagtttctgagacctacaaatgtatagaaaccgtagatgctttattttcattggggttatattggtatctatggcatatgctgttatttagtaacaatatttagatactgctggattacagGGAGA
TGCTACTACAAGAACAGTTGCGAGCAGCCAAGGCAAGTGTTTCAAATATGCAGAGATTACATGATTTTGGCCAAAGTCAGTTATTTGAGTTCCGAGCACAATCAGAGGAGGAGAGAGCAGCAAAGCAATCGGAACTCAATCTTCTTACAGATGAGGTTGATCGAGCTCAGGCACGATTGTTAAGCCTGGAAAGGGAAAAG
GACCAGTTGCGATCCCAACTTCAGGTGGTTCACAGTCAGGAAACTGAACACAAGGAAAGAGAAGACCTGGATGCAAGCAACACTCTTGAGGCTTCTTTAAGTGCAAAGGAGAAGATCATTTCAGAGCTGCATACAGAGCTTCATAAATTGGAAACAGCATTGTCAAATGAGCGGGAACAACACTTAATTGAGATTAAGAA
GCTGAATACTTTTCTAGTTGAAAAGG