NA ----> NA
Intron 1 GTAAGCCCCT ... ACTTGGAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 86.01 | 24 | 146 | 149 |
| A2 | 81.42 | 34 | 171 | 127 |
| A3 | 84.77 | 30 | 207 | 127 |
| A4 | 84.06 | 22 | 133 | 99 |
| A5 | 89.13 | 10 | 102 | 62 |
| A6 | 82.93 | 314 | 1560 | 1491 |
| A7 | 84.23 | 209 | 1112 | 1120 |
| A8 | 81.52 | 251 | 991 | 1224 |
| A9 | 82.76 | 223 | 1021 | 1120 |
| A10 | 84.43 | 161 | 966 | 780 |
>TRINITY_DN104816_c0_g1_i2 from sample A5 / Example spliced isoformTGGAGAGAAAATCTTGGCTTCGGGCCGTGGAAATATTTTTAAGAGGGACAAGAGGGCCAACTCCTTGTCTATGGTTTTGATGAACACGAAGGCAGAATGCCCCGATCTCATAGTGCTTGTTCTCTTTTCTTAGGATTTACTTCGTGAATTCTGGCCGTGGGAGGGTTTGGTCTCTTGTCATTTTACATGATAGTTTTGGA
CCTGGAACTGCATAAATGGGATGTGTTTCCCTTTTCTTTTAAATTATGCAGGGTTTTAAGTGTGTCGTGATAGTGGTACGAATGTTTAGATCTTCCAAGATTTTTAGCCCCAAGTGGAAGATTGGCGTTGTAATGGAAACTTAATGATTTGCAATCTTTTGCTGCGGATATTTGAACTCGAGCCTGTTTATGTAAGGCAT
TGTTTATGGACGCAACTAGGTTATTGTTGTGGTATTAAAATTATGGGCTTGATCTGTCTCTGGTGTGTTTTATAATGAAAGACTGTGGTTGCAACCCTTAAA
>TRINITY_DN104816_c0_g1_i1 from sample A5 / Example unspliced isoform:GCTGGGGGGGTCTTTACTGTTCCTATCGGGATTGTTAGGATTCTCAACCACCTTCAGCCACATGGATTTCACGAAACCTAACTTTCTATGGCACTGTGTTTTTTGTTCACTTATGCATTTTTGGAAGGCCGAGGGTTTCCTCTGGCTCTGAGGTGCTTGGTGGGCCGAGTCCAGGGTCTCGGCTTCACGACCTAGTCTTT
GGCAACTGCGTGAAAGAAATTTGAAAACTATATGCCAGGAGTTTCCAGTCTTGCAGATGGAAGTGCGACTTGAAATGGAGAGAAAATCTTGGCTTCGgtaagccccttcatcccttcatgggatatctctggtgtttgcaacctgctaatgatagtggttgagttgaacttgctagtctgaaatacaacgcagtcatagg
tagttttgctatagtttggggtttctaaagtttgaagaaaaagatcaagcactaagggtttggggttgatcacccggcttggctaaaatactacattttgtttatttcttttatctcaaaccttcgtgagatagtgatatgcacctgtatccacttggaaagGGCCGTGGAAATATTTTTAAGAGGGACAAGAGGGCCAA
CTCCTTGTCTATGGTTTTGATGAACACGAAGGCAGAATGCCCCGATCTCATAGTGCTTGTTCTCTTTTCTTAGGATTTACTTCGTGAATTCTGGCCGTGGGAGGGTTTGGTCTCTTGTCATTTTACATGATAGTTTTGGACCTGGAACTGCATAAATGGGATGTGTTTCCCTTTTCTTTTAAATTATGCAGGGTTTTAAG
TGTGTCGTGATAGTGGTACGAATGTTTAGATCTTCCAAGATTTTTAGCCCCAAGTGGAAGATTGGCGTTGTAATGGAAACTTAATGATTTGCAATCTTTTGCTGCGGATATTTGAACTCGAGCCTGTTTATGTAAGGCATTGTTTATGGACGCAACTAGGTTATTGTTGTGGTATTAAAATTATGGGCTTGATCTGTCTC
TGGTGTGTTTTATAATGAAAGACTGTGGTTGCAACCCTTAAA
Intron 2 GTAAGCCCCT ... CTTTTCTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 64.4 | 76 | 146 | 129 |
| A2 | 62.02 | 94 | 171 | 136 |
| A3 | 61.37 | 113 | 207 | 152 |
| A4 | 65.69 | 70 | 133 | 135 |
| A5 | 64.91 | 40 | 102 | 46 |
| A6 | 61.13 | 1049 | 1560 | 1740 |
| A7 | 59.97 | 745 | 1112 | 1120 |
| A8 | 63.58 | 674 | 991 | 1362 |
| A9 | 61.63 | 704 | 1021 | 1241 |
| A10 | 59.95 | 602 | 966 | 836 |
>TRINITY_DN104816_c0_g1_i3 from sample A5 / Example spliced isoformGCTGGGGGGGTCTTTACTGTTCCTATCGGGATTGTTAGGATTCTCAACCACCTTCAGCCACATGGATTTCACGAAACCTAACTTTCTATGGCACTGTGTTTTTTGTTCACTTATGCATTTTTGGAAGGCCGAGGGTTTCCTCTGGCTCTGAGGTGCTTGGTGGGCCGAGTCCAGGGTCTCGGCTTCACGACCTAGTCTTT
GGCAACTGCGTGAAAGAAATTTGAAAACTATATGCCAGGAGTTTCCAGTCTTGCAGATGGAAGTGCGACTTGAAATGGAGAGAAAATCTTGGCTTCGGATTTACTTCGTGAATTCTGGCCGTGGGAGGGTTTGGTCTCTTGTCATTTTACATGATAGTTTTGGACCTGGAACTGCATAAATGGGATGTGTTTCCCTTTTC
TTTTAAATTATGCAGGGTTTTAAGTGTGTCGTGATAGTGGTACGAATGTTTAGATCTTCCAAGATTTTTAGCCCCAAGTGGAAGATTGGCGTTGTAATGGAAACTTAATGATTTGCAATCTTTTGCTGCGGATATTTGAACTCGAGCCTGTTTATGTAAGGCATTGTTTATGGACGCAACTAGGTTATTGTTGTGGTATT
AAAATTATGGGCTTGATCTGTCTCTGGTGTGTTTTATAATGAAAGACTGTGGTTGCAACCCTTAAA
>TRINITY_DN104816_c0_g1_i1 from sample A5 / Example unspliced isoform:GCTGGGGGGGTCTTTACTGTTCCTATCGGGATTGTTAGGATTCTCAACCACCTTCAGCCACATGGATTTCACGAAACCTAACTTTCTATGGCACTGTGTTTTTTGTTCACTTATGCATTTTTGGAAGGCCGAGGGTTTCCTCTGGCTCTGAGGTGCTTGGTGGGCCGAGTCCAGGGTCTCGGCTTCACGACCTAGTCTTT
GGCAACTGCGTGAAAGAAATTTGAAAACTATATGCCAGGAGTTTCCAGTCTTGCAGATGGAAGTGCGACTTGAAATGGAGAGAAAATCTTGGCTTCGgtaagccccttcatcccttcatgggatatctctggtgtttgcaacctgctaatgatagtggttgagttgaacttgctagtctgaaatacaacgcagtcatagg
tagttttgctatagtttggggtttctaaagtttgaagaaaaagatcaagcactaagggtttggggttgatcacccggcttggctaaaatactacattttgtttatttcttttatctcaaaccttcgtgagatagtgatatgcacctgtatccacttggaaagggccgtggaaatatttttaagagggacaagagggccaa
ctccttgtctatggttttgatgaacacgaaggcagaatgccccgatctcatagtgcttgttctcttttcttagGATTTACTTCGTGAATTCTGGCCGTGGGAGGGTTTGGTCTCTTGTCATTTTACATGATAGTTTTGGACCTGGAACTGCATAAATGGGATGTGTTTCCCTTTTCTTTTAAATTATGCAGGGTTTTAAG
TGTGTCGTGATAGTGGTACGAATGTTTAGATCTTCCAAGATTTTTAGCCCCAAGTGGAAGATTGGCGTTGTAATGGAAACTTAATGATTTGCAATCTTTTGCTGCGGATATTTGAACTCGAGCCTGTTTATGTAAGGCATTGTTTATGGACGCAACTAGGTTATTGTTGTGGTATTAAAATTATGGGCTTGATCTGTCTC
TGGTGTGTTTTATAATGAAAGACTGTGGTTGCAACCCTTAAA