NA ----> NA
Intron 1 GTTCAATGTT ... CGCATGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 2 | 0 |
| A2 | 100 | 0 | 2 | 0 |
| A3 | 27.27 | 4 | 1 | 2 |
| A4 | 100 | 0 | 5 | 2 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 24 | 38 | 7 | 17 |
| A7 | 25.71 | 13 | 4 | 5 |
| A8 | 31.43 | 24 | 13 | 9 |
| A9 | 31.03 | 20 | 6 | 12 |
| A10 | 33.33 | 10 | 8 | 2 |
>TRINITY_DN43944_c0_g6_i2 from sample A6 / Example spliced isoformGAGAAAGACAGCTCTTTCTCCCTTTATGGTTCTTGTGAGTTGGGCATAACTTGACCAGGGATTGGGAGATCCCATCGGAAAGTTTTGGCTTCTGTGTTCTACAACCCCACTTGCTCGGGGGTTCGGGAGGAAGAAGACTACTCCCGATACGGTGGGAGGTCAACCAAGGAGCTGTATCTTCGTCACTTGGCTCGGATCGA
ACAATCGAATCGGCCGCTACAACAACAGTCTACCCATTTCAAAACCGGCGACCAAAACAGGGTTATTTCATCAACGTCGAATTGGCTCAAAAATATTTAAACCTGTGTATATTGCTTTCAGCGTTTCCAGAATTAATTTTCTTCAAGTCAATTTGGATCCAAGGATATAAAAACTATGTTTGCATCCTTTATGTGTTTCC
ATAATTGTTTGGTTGTTTTCTTGAAGTGGATCTGTGTTGTTCATTTCAAAAAGGTGAATCCCAGAATGATATTAAGATGGTAATCGAGCCAAAGGGCGAATTCCAGAATGGCGTTATGAATTTTAATTTGAACTTTAGAAAAATCGTTGTATTCCATTCGAAGTGCGATTTCAGAGTTGTCATGCGATTGCAGTATGACC
TTAATTGAGATCTTGGGTATTATTGAATTTCCAGATCTTATTTCTTTATTTCAATCCCAAGATCTCGACCTAAGTAAAATGCCTCTGTGATCTAGTTTATCGAATTTCTGGGTCTCATTCTTTTTTCAATTCGGAGACCTCTGCGCAGACAGAATTTAATCATCCCAATGTTCATTTCAGTATATACATCGCGTGCCCCC
GAATGTCATAGACCCTGTAGATCCACGCTATATATTGCCATGTGCTTTTACGTGTAGGGAGACCCAGTTTAGACCCGTGGTAGTAATTTCTTTTGGAGATCCGATCCACTTTCTATGCATTGCTGTTTATGGAAAACTCAGTCTTAAATCTTTTTCTTAACTTGAATTATGAAGTGGAGTTACAGAGTCCTTCTCGGTCG
ACTGCCCCGAATACACTTATTTGTAACTTCACCCTTCAAATTTCTCTGCGTTTTCAT
>TRINITY_DN43944_c0_g6_i1 from sample A6 / Example unspliced isoform:GAGAAAGACAGCTCTTTCTCCCTTTATGGTTCTTGTGAGTTGGGCATAACTTGACCAGGGATTGGGAGATCCCATCGGAAAGTTTTGGCTTCTGTGTTCTACAACCCCACTTGCTCGGGGGTTCGGGAGGAAGAAGACTACTCCCGATACGGTGGGAGGTCAACCAAGGAGCTGTATCTTCGTCACTTGGCTCGGATCGA
ACAATCGAATCGGCCGCTACAACAACAGTCTACCCATTTCAAAACCGGCGACCAAAACAGgttcaatgttcttccgtttttgttttattttcagtaattgagatggatactttcgaagttgtgaaacactctacccttcagcaattatattatgaaaactctattttaatttatttactttatagactactgcacatttg
ctgttaaactaggatccgattcttggggttgaacctaatgaagactaacggaaccatttattctattcactcaaactctgtttacattttatccgcatgccagGGTTATTTCATCAACGTCGAATTGGCTCAAAAATATTTAAACCTGTGTATATTGCTTTCAGCGTTTCCAGAATTAATTTTCTTCAAGTCAATTTGGA
TCCAAGGATATAAAAACTATGTTTGCATCCTTTATGTGTTTCCATAATTGTTTGGTTGTTTTCTTGAAGTGGATCTGTGTTGTTCATTTCAAAAAGGTGAATCCCAGAATGATATTAAGATGGTAATCGAGCCAAAGGGCGAATTCCAGAATGGCGTTATGAATTTTAATTTGAACTTTAGAAAAATCGTTGTATTCCAT
TCGAAGTGCGATTTCAGAGTTGTCATGCGATTGCAGTATGACCTTAATTGAGATCTTGGGTATTATTGAATTTCCAGATCTTATTTCTTTATTTCAATCCCAAGATCTCGACCTAAGTAAAATGCCTCTGTGATCTAGTTTATCGAATTTCTGGGTCTCATTCTTTTTTCAATTCGGAGACCTCTGCGCAGACAGAATTT
AATCATCCCAATGTTCATTTCAGTATATACATCGCGTGCCCCCGAATGTCATAGACCCTGTAGATCCACGCTATATATTGCCATGTGCTTTTACGTGTAGGGAGACCCAGTTTAGACCCGTGGTAGTAATTTCTTTTGGAGATCCGATCCACTTTCTATGCATTGCTGTTTATGGAAAACTCAGTCTTAAATCTTTTTCT
TAACTTGAATTATGAAGTGGAGTTACAGAGTCCTTCTCGGTCGACTGCCCCGAATACACTTATTTGTAACTTCACCCTTCAAATTTCTCTGCGTTTTCAT