NA ----> NA
Intron 1 GTGCCCAAGC ... GCCACAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.21 | 53 | 40 | 44 |
| A2 | 49.47 | 24 | 27 | 20 |
| A3 | 48.65 | 19 | 20 | 16 |
| A4 | 41.46 | 24 | 15 | 19 |
| A5 | 39.13 | 7 | 4 | 5 |
| A6 | 50 | 1 | 1 | 1 |
| A7 | -1 | 0 | 0 | 0 |
| A8 | 33.33 | 3 | 2 | 1 |
| A9 | 50 | 1 | 1 | 1 |
| A10 | -1 | 0 | 0 | 0 |
>TRINITY_DN46097_c1_g5_i3 from sample A8 / Example spliced isoformGTGATCCCAAAGGAAACACCCATCTGCTGCTTAACAAAACATGAAATTTTGTACGAAGATAACCTTCTCGAAATCTAAATAGATCAGTCATCATACATGAAGAGAAAAATGACTTAATAAGCTTTCCCAGGGTATCACCCACAAAAGGTGTCCAAGCAACATATTATCCACTGGTAGATGTTTTATCAAAGTGCTTTAAA
TGACTTAAAACAACCTTAAAGAATGGATAAAGTCTCTGATTTGGGTGCAATGATGGGATAAAACAAGTTGAGAAGAATCACCCTTCTACTCAAAATAAGACAAGACCTGCAGATAGAAACTGAGAATAACCCCCTAGACAAGGACCTCTCTTGGCACTTAGATTTTGCTTAAAATAGCTCTCACGCAACACCCATTTTTA
GCTTTGCTCAAAAGAAGACATCCTAATCACCATAAAAGCATGCTAGAAACAACTATAATACAATGCATTTGTTCTCCAAATATGATGTTCTTTTCTTGTCTTCAAAAATATTGCTTCATCGTTCTAGAATCAACTCCTATGGCAGTGCTCCTTCTTAGTCTGAATTTAGTATACAACTAGAGTCTAAAATTAAACTACTT
GCACTCTAAGGTAGCACTTCGGTTATGCAATAATTGCACTTCAATGTAATTTGTTCTCCAAATATGATGTTCTTTTCTTGTCTTCACAAATAGTGCTTCATCGTTCTAGAATCAACTCCTATGGCAGTGCTCCTTCTTAGTCTGAATTTAGTATACAACTAGAGTCTAAAATTAAACTACTTGCACTCTAAGGTAGCACT
TCGGTTATGCAATAATTGCACTTCAATGTAACTGATCTTTGTCTTTCATAAGAATGCCCCCATTAGATGATTGTTCACAAAAGCAAAATCAACAGAATTTATGAAAGGTGCCCTTCATTGATCTGAAAATTAGGTTGCTCTTGAAGGCATCTCTGAAATGGGGAATATTCATATAGCTCCTTCTTCAAACAAGACTTGGG
TTCAAATAGACTTTTCTTGCTTTACAAGCAGCCAGTGAATCAGATTGAATCCAGATTGAATCAATCTTCTTGATGATGCTCCACTTGATGCTCTCATGAAGTGATGATATATGTTGTCTCTAGGTGTTGTACCTTTTGAAATCACTATTATATCATAAATATACCGTGGGGAAACTAATACATACAATTTGCTTGGTGAA
ACCAACAAAGGAAGTTTGTTTTGTTGCAGATCAAAATCAAGTCTAGACCTGACAACTTGTCTTCAAGTAAGAATCAGTGATGAAAGTATCTGCTGTAGATGACTAAAATTAATAACAAACGAAAGTGATGGGGCAAAAAATTCATGATGTACTGCAAAAACCATGTAAAACAATACTGATATACCTTAGATAAAGGCTCC
TTACTTGCCTTCGTATTATCAATGAACATGGAGTGTTGTCCCTATGGCAAAGAATTCTTATTTCTGCTGCAAATACTGTAAATATATGCAATGAACATGGAGTGTTGTCCATATGGCAAATAGTTGTCATTTCTGCTGCAAACACTGTAAATATATGCATAAAGTAGAGGTAAGGTGCTGCTGGCATTGTGCAAACCATT
CCTTTTCAAAATCAA
>TRINITY_DN46097_c1_g5_i1 from sample A8 / Example unspliced isoform:GTGATCCCAAAGGAAACACCCATCTGCTGCTTAACAAAACATGAAATTTTGTACGAAGATAACCTTCTCGAAATCTAAATAGATCAGTCATCATACATGAAGAGAAAAATGACTTAATAAGCTTTCCCAGGGTATCACCCACAAAAGgtgcccaagctagccacaaaagGTGTCCAAGCAACATATTATCCACTGGTAGA
TGTTTTATCAAAGTGCTTTAAATGACCGAAAACAACCTTAAAGAATGGATAAAGTCTCTGATTTGGGTGCAATGATGGGATAAAACAAGTTGAGAAGAATCACCCTTCTACTCAAAATAAGACAAGACCTGCAGATAGAAACTGAGAATAACCCCCTAGACAAGGACCTCTCTTGGCACTTAGATTTTGCTTAAAATAGC
TCTCACGCAACACCCATTTTTAGCTTTGCTCAAAAGAAGACATCCTAATCACCATAAAAGCATGCTAGAAACAACTATAATACAATGCATTTGTTCTCCAAATATGATGTTCTTTTCTTGTCTTCAAAAATATTGCTTCATCGTTCTAGAATCAACTCCTATGGCAGTGCTCCTTCTTAGTCTGAATTTAGTATACAACT
AGAGTCTAAAATTAAACTACTTGCACTCTAAGGTAGCACTTCGGTTATGCAATAATTGCACTTCAATGTAATTTGTTCTCCAAATATGATGTTCTTTTCTTGTCTTCACAAATAGTGCTTCATCGTTCTAGAATCAACTCCTATGGCAGTGCTCCTTCTTAGTCTGAATTTAGTATACAACTAGAGTCTAAAATTAAACT
ACTTGCACTCTAAGGTAGCACTTCGGTTATGCAATAATTGCACTTCAATGTAACTGATCTTTGTCTTTCATAAGAATGCCCCCATTAGATGATTGTTCACAAAAGCAAAATCAACAGAATTTATGAAAGGTGCCCTTCATTGATCTGAAAATTAGGTTGCTCTTGAAGGCATCTCTGAAATGGGGAATATTCATATAGCT
CCTTCTTCAAACAAGACTTGGGTTCAAATAGACTTTTCTTGCTTTACAAGCAGCCAGTGAATCAGATTGAATCCAGATTGAATCAATCTTCTTGATGATGCTCCACTTGATGCTCTCATGAAGTGATGATATATGTTGTCTCTAGGTGTTGTACCTTTTGAAATCACTATTATATCATAAATATACCGTGGGGAAACTAA
TACATACAATTTGCTTGGTGAAACCAACAAAGGAAGTTTGTTTTGTTGCAGATCAAAATCAAGTCTAGACCTGACAACTTGTCTTCAAGTAAGAATCAGTGATGAAAGTATCTGCTGTAGATGACTAAAATTAATAACAAACGAAAGTGATGGGGCAAAAAATTCATGATGTACTGCAAAAACCATGTAAAACAATACTG
ATATACCTTAGATAAAGGCTCCTTACTTGCCTTCGTATTATCAATGAACATGGAGTGTTGTCCCTATGGCAAAGAATTCTTATTTCTGCTGCAAATACTGTAAATATATGCAATGAACATGGAGTGTTGTCCATATGGCAAATAGTTGTCATTTCTGCTGCAAACACTGTAAATATATGCATAAAGTAGAGGTAAGGTGC
TGCTGGCATTGTGCAAACCATTCCTTTTCAAAATCAA