NA ----> NA

Intron 1 GTTGCTCAAT ... TGATGGAAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	66.42	90	238	118
A2	64.66	94	237	107
A3	58.38	149	324	94
A4	66.15	88	242	102
A5	54.66	73	141	35
A6	59.75	802	1646	735
A7	58.72	780	1532	687
A8	60.84	606	1268	615
A9	59.28	812	1573	791
A10	59.02	703	1475	550

>TRINITY_DN45997_c0_g2_i12 from sample A10 / Example spliced isoform

TGAGAGTTAGTTTAGGTTAGGTTGATTCAAATGAGAGTAAGGCGCTTATCATATTCTAACCGTTGAAGAGAGCGGAAAAGGACAAGCCACAAGTTTGTGTATATATATTAGCGGTTAACCCAATTTCAAATCATTTTCCTCATCTTCCTCAAGCGCTTCCATTATGTGTATATGTCTGCTTGGGCGTCTGGGTATAAGTC
CTGAGTTTGTCTGTTTGTGGGCTTTAATGCCTGTCATGTCTCTGCAGTATGTGATAGATAGATGAGGCTGGACTGAAGGGGAATTGCATTTGGGAGCAAACAACTTCAAGGGACGGGCTGAAGGACGCAGTCAGCCAAGAAGAAAATAATAATTGAGTACGAGGCCGAAGTCATTGCCCAGCTTGCCTTTTCTTGGCTTC
TGAAGGAAGCCAAGAAAATAATAATTGAGTACTCTGCTGAACTCCAGATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGGAAATCAATGCTCTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGTAGACTTGCCTGAGGGTTGGGTTCGACTTTGTTC
TGTTCCTATG

>TRINITY_DN45997_c0_g2_i3 from sample A10 / Example unspliced isoform:

TGAGAGTTAGTTTAGGTTAGGTTGATTCAAATGAGAGTAAGGCGCTTATCATATTCTAACCGTTGAAGAGAGCGGAAAAGGACAAGCCACAAGTTTGTGTATATATATTAGCGGTTAACCCAATTTCAAATCATTTTCCTCATCTTCCTCAAGCGCTTCCATTATGTGTATATGTCTGCTTGGGCGTCTGGGTATAAGTC
CTGAGTTTGTCTGTTTGTGGGCTTTAATGCCTGTCATGTCTCTGCAGTATGTGATAGATAGATGAGGCTGGACTGAAGGGGAATTGCATTTGGGAGCAAACAACTTCAAGGGACGGGCTGAAGGACGCAGTCAGgttgctcaatggttttctttggtcacaaagataaatgctctttatatttactagcttcctttaatt
tagacatcagatctgctttgccatggcttggtttagctctctctttctcttggtgaattcatttgaggtttctttatttgatttctgtcatttcatctttgcctttgccttgggatttgggcttggatttcctcttttctgatggaaagCCAAGAAGAAAATAATAATTGAGTACGAGGCCGAAGTCATTGCCCAGCTTG
CCTTTTCTTGGCTTCTGAAGGAAGCCAAGAAAATAATAATTGAGTACTCTGCTGAACTCCAGATTATAGCAGGAGCTAGAATGGAAGGGATTTAATTTTGAGCCGCAAACAACTTCAAGGTTTGCTTATGGAAATCAATGCTCTCTGTCAAATGGTTAAAGATCTGCTCTGCTTTGCTCTGTAGACTTGCCTGAGGGTTG
GGTTCGACTTTGTTCTGTTCCTATG