sp|P42654|1433B_VICFA ----> 14-3-3-like protein B
Intron 1 GTAAGTAATT ... TGGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.12 | 62 | 40 | 54 |
| A2 | 46.21 | 39 | 32 | 35 |
| A3 | 40.85 | 42 | 31 | 27 |
| A4 | 41.86 | 50 | 40 | 32 |
| A5 | 41.18 | 20 | 12 | 16 |
| A6 | 41.67 | 357 | 221 | 289 |
| A7 | 41.69 | 207 | 137 | 159 |
| A8 | 42.24 | 240 | 165 | 186 |
| A9 | 42.52 | 246 | 170 | 194 |
| A10 | 40.18 | 131 | 85 | 91 |
>TRINITY_DN120714_c1_g6_i4 from sample A1 / Example spliced isoformTCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGA
TATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAA
TGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
>TRINITY_DN120714_c1_g6_i2 from sample A1 / Example unspliced isoform:TCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGgtaagtaatttgagtggtttgcagCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTAC
ACATGGGATTGAATCTTTAGCTGATATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATG
CCATACTGTTGAAGCATATATGAATGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
Intron 2 GTGATGCATT ... AATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 7.59 | 67 | 7 | 4 |
| A2 | 3.17 | 61 | 2 | 2 |
| A3 | 4.65 | 41 | 3 | 1 |
| A4 | 9.47 | 43 | 4 | 5 |
| A5 | 3.33 | 29 | 0 | 2 |
| A6 | 1.09 | 227 | 4 | 1 |
| A7 | 1.48 | 200 | 6 | 0 |
| A8 | 3.16 | 153 | 6 | 4 |
| A9 | 1.13 | 219 | 0 | 5 |
| A10 | 1.3 | 190 | 4 | 1 |
>TRINITY_DN120714_c1_g6_i4 from sample A1 / Example spliced isoformTCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGA
TATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAA
TGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
>TRINITY_DN120714_c1_g6_i1 from sample A1 / Example unspliced isoform:TACATATATAAAATTCGTGATTATGTATTATTTACTCTTTGCTAGCATGACCTATTTTTTTTTTTTAATGTGCGGTTTCCATTTGCAGATAGCTATGCTTTCATTTATTTACTGATTATTCTATCATTTTACCATCTTAACAGGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGA
AACTGCTGATCAGGCTCTCAAAGCATACATGgtgatgcattgaaaccactacctttcaaatgaaactattttgcaaggatctatttagtaaagttctgttagatttagtagaggtggttgcaagggtctattcatttgtatgcatatctttgtctagtcttagctctaagtcgttttgtaatatttcagACTGCTTCAAC
CACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTTCTATTATGAAATTCTTAACTCTCCTGAGAGGTGAGATAATTCTGTGGATTCTTGATTTGACATTCAAAGCTTAAGCACTTTTTTATTTGAATGGATTTGACATTGAAAACTCGTTTCTTTCATTTGAATGC
AAGTTGAAATTTGTGTCTAAGCTTTTATGACTGGCGATATTTATTTGTTGTTTGTTGCACAATGGATTTCTTTGTGTTTGTTTGTTTCAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACA
ATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGTAAGGCTTATGGCAACATACGTTATTTTGAAATACAGGAC
Intron 3 GTAAGTAATT ... GTGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 27.49 | 62 | 16 | 31 |
| A2 | 28.44 | 39 | 13 | 18 |
| A3 | 30.58 | 42 | 24 | 13 |
| A4 | 25.37 | 50 | 25 | 9 |
| A5 | 28.57 | 20 | 6 | 10 |
| A6 | 22.48 | 357 | 74 | 133 |
| A7 | 25.27 | 207 | 65 | 75 |
| A8 | 22.46 | 240 | 60 | 79 |
| A9 | 23.84 | 246 | 71 | 83 |
| A10 | 25.99 | 131 | 47 | 45 |
>TRINITY_DN120714_c1_g6_i4 from sample A1 / Example spliced isoformTCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGA
TATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAA
TGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
>TRINITY_DN120714_c1_g6_i6 from sample A1 / Example unspliced isoform:AGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTGATGAGGTTAAGCCAGAAGATGGAGAGgtaa
gtaatttgagtggtttgcaggtaattgctttttacagtcttctacagttaaatatagggtgtagagtttcataaatttttgtatcattggtttcctctattgtactggagctgtttaagtaggcctttttgcttcttagttattagtatcattgagaggtattcgctcttggccatgttgtgtttgcagCATTAATACTA
AAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGATATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGAT
GTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAATGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGC
TGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
Intron 4 GTAATTGCTT ... GTGTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 36.47 | 54 | 5 | 31 |
| A2 | 33.96 | 35 | 10 | 18 |
| A3 | 32.5 | 27 | 9 | 13 |
| A4 | 21.95 | 32 | 8 | 9 |
| A5 | 38.46 | 16 | 1 | 10 |
| A6 | 31.52 | 289 | 9 | 133 |
| A7 | 32.05 | 159 | 20 | 75 |
| A8 | 29.81 | 186 | 10 | 79 |
| A9 | 29.96 | 194 | 17 | 83 |
| A10 | 33.09 | 91 | 7 | 45 |
>TRINITY_DN120714_c1_g6_i2 from sample A1 / Example spliced isoformTCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGGTAAGTAATTTGAGTGGTTTGCAGCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTAC
ACATGGGATTGAATCTTTAGCTGATATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATG
CCATACTGTTGAAGCATATATGAATGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
>TRINITY_DN120714_c1_g6_i6 from sample A1 / Example unspliced isoform:AGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTGATGAGGTTAAGCCAGAAGATGGAGAGGTAA
GTAATTTGAGTGGTTTGCAGgtaattgctttttacagtcttctacagttaaatatagggtgtagagtttcataaatttttgtatcattggtttcctctattgtactggagctgtttaagtaggcctttttgcttcttagttattagtatcattgagaggtattcgctcttggccatgttgtgtttgcagCATTAATACTA
AAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGATATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGAT
GTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAATGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGC
TGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
Intron 5 GTGAGATAAT ... TTTGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.17 | 51 | 11 | 20 |
| A2 | 18.87 | 43 | 2 | 10 |
| A3 | 32.5 | 54 | 1 | 26 |
| A4 | 3.85 | 25 | 1 | 1 |
| A5 | 8.33 | 11 | 3 | 1 |
| A6 | 18.22 | 184 | 3 | 41 |
| A7 | 20.78 | 183 | 5 | 48 |
| A8 | 17.99 | 155 | 8 | 34 |
| A9 | 14.75 | 185 | 7 | 32 |
| A10 | 17.24 | 120 | 0 | 25 |
>TRINITY_DN120714_c1_g6_i4 from sample A1 / Example spliced isoformTCTTCGTGGCCGAGGGTTTCGAAGCGCGGGGAGATCAGCCTAAATAAATAGGGAATTGGGATTGTTTGCTGCAAGTATTGTTCTTGTTCGCCAAGAAATCAGTTCCGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGCTTCATTTCGTCAGGGTTGGCTAAAATATGACCACCGAAAAGGAGAGGG
GAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTCTGGGGTTGTGATTTGGTCTTCTGCGTTCGATTCTGCACGTTTTGAGATTCATTTCGTCAGGGTTGGATAAAACATGACCACCGAAACGGAGAGGGAAAATCATGTATACATGGCCAAGCTCGCCAAGAAATCAGTTACGGGGTTGTGATTTGCTCTTC
TGTGTTCGATTCTGCACGTTTTGAGCTTTATTTTGTCAGGGTTGGCTAAAAGATGACCACCGAAAAGGAGAGGGAATATCATGTATACATGGCCAAGCTCGCCGAGCAGGCCGAACGATACGATGAAATGGTGGATTCTATGAAGAAAGTGGCCAAATTAGACGTTGAACTGACAGTGGAAGAAAGAAATCTGCTTTCTG
TTGGGTATAAGAATGTTATTGGTGCTAGGAGGGCTTCCTGGCGGATTATGTCCTCCATTGAACAAAAAGAGGAGGCCAAGGGTAATGAGGTGAATGCAAAGCGAATCAGGGACTATCGTCATAAAGTTGAGACAGAGCTGTCTAGAATCTGTGATGACATTTTAAATATTATTGATGAACATCTTATTCCATCTTCTAAC
TCTGGAGAGTCTATGGTCTTCTATTACAAGATGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGAAACTGCTGATCAGGCTCTCAAAGCATACATGACTGCTTCAACCACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTT
CTATTATGAAATTCTTAACTCTCCTGAGAGAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACAATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGAGAAGAGCAGATCAAAAGTG
ATGAGGTTAAGCCAGAAGATGGAGAGCATTAATACTAAAAGGGGAGCGGAACGAGTTTATGCATGAGAAGCTATGATCCCTTGATTATTAGGGGGTAGATCATTATTTAATTTATAGTTCTTCCATAGTTTCTGCAGCATTGTAGATATAGGTATTACTTCAGCCCATTTGGTTACACATGGGATTGAATCTTTAGCTGA
TATGGCATTGGACTCGTTTCGCTAAATAGGTTTAGATGTATAAAACTTTCTATTCAGGGATCTGTTTTTTTTGTGGCTGGAACTGGGATGTATCTCTTTAGGGCATAAATCTGCAGCTGAAGGTGTTGTCTGATTTTAAAACAAAGAGCACATCGTATTGTTTATATATTTGAATGCCATACTGTTGAAGCATATATGAA
TGCGCTTTTATTGTTGTTACTTGATCTTTGTTCAGGCTGGGAAGTTTTTTGATACAGTAAGTACATTTCTGTTGCTGTTCTCAGCTTTTTAATGACAGCATATTTGCAAA
>TRINITY_DN120714_c1_g6_i1 from sample A1 / Example unspliced isoform:TACATATATAAAATTCGTGATTATGTATTATTTACTCTTTGCTAGCATGACCTATTTTTTTTTTTTAATGTGCGGTTTCCATTTGCAGATAGCTATGCTTTCATTTATTTACTGATTATTCTATCATTTTACCATCTTAACAGGAAAGGAGATTACTATCGTTATCTTGCCGAGTTCAAAACTGGTAGTGATAGGAAAGA
AACTGCTGATCAGGCTCTCAAAGCATACATGGTGATGCATTGAAACCACTACCTTTCAAATGAAACTATTTTGCAAGGATCTATTTAGTAAAGTTCTGTTAGATTTAGTAGAGGTGGTTGCAAGGGTCTATTCATTTGTATGCATATCTTTGTCTAGTCTTAGCTCTAAGTCGTTTTGTAATATTTCAGACTGCTTCAAC
CACTGCAACAACAGATTTGCCTCCAACTCATCCCATCAGGCTTGGCCTTATTCTGAATTTCTCAGTGTTCTATTATGAAATTCTTAACTCTCCTGAGAGgtgagataattctgtggattcttgatttgacattcaaagcttaagcacttttttatttgaatggatttgacattgaaaactcgtttctttcatttgaatgc
aagttgaaatttgtgtctaagcttttatgactggcgatatttatttgttgtttgttgcacaatggatttctttgtgtttgtttgtttcagAGCGTGTCATTTGGCCAAACAAGCATTTGACGAAGCAATTGCAGAACTTGATGCTCTTAGTGAAGACTCGTACAAAGATAGCACATTAATAATGCAGCTACTAAGAGACA
ATCTTACCCTTTGGACTTCAGATTTGCAAGAAGATGGAGGTAAGGCTTATGGCAACATACGTTATTTTGAAATACAGGAC