sp|O23627|SYGM1_ARATH ----> Glycine--tRNA ligase, mitochondrial 1
Intron 1 GTTTACTATC ... AACCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.15 | 38 | 8 | 10 |
| A2 | 27.78 | 26 | 12 | 8 |
| A3 | 31.75 | 43 | 25 | 15 |
| A4 | 25.71 | 26 | 10 | 8 |
| A5 | 13.64 | 19 | 3 | 3 |
| A6 | 15.79 | 16 | 5 | 1 |
| A7 | 16.05 | 34 | 7 | 6 |
| A8 | 18.75 | 39 | 6 | 12 |
| A9 | 21.88 | 50 | 8 | 20 |
| A10 | 21.28 | 37 | 18 | 2 |
>TRINITY_DN110638_c0_g1_i3 from sample A3 / Example spliced isoformCGGAGCACTAGCCGACCATATTGTTTGGGGATTCCAAATTTACAACAGCCGCAAGTTGCAACCCTCGCTAAAACCCCAATACCACGTTATCAACGGATTCATATATAAACCAGAAAATCCGTACTCTTAGCAAACCCTAGTCAGCTTCTGACACTGATGAAGCCGAAGCCTGGATTGCATGCATCCAATCCAAGCCTTCT
CCTTTAGAGTCTTCAAATTCGCCATCAAAAACCCACCTTGCACCCGTTTTCAGATCTTAAATCGCCTCATCAGAAACCCAATTTCTGGACTTGCCAGGGTCTACAGTACTGCAGCAGCAACAATGGGGACCGTGGAGAACAACGTTGAATCCCTGAGAAAATCAGTCATTGAAAAACAGAACATAGTGGATAAGCAAGGC
GACGAAGTTCGCGCCCTGAAGGCTTCCAAGGCTTCAAAGGCGGCCATCGAGCAGGCCGTCAATCAATTGAAGGAGTTGAAGTTAGAGCTGCAATCTGTATCTAGAGAACTTCAATCCAGGCTTTCCGAGGACAGTGGAGCTTCTATGAGCAAAGAGGCTTTCAGGCAAGCCGTTAACAATACGTTGGAGCGGAGGTTGTT
TTACATACCCTCCTTCAAGATTTACAGAGGAGTTGCTGGGTTGTATGATTATGGGCCTCCGGGCTGTGCTGTCAAGGCTAATGTCATTGCCTTTTGGCGACAGCACTATGTCTTAGAAGAGAATATGTTGGAGGTTGATTGTCCATGTGTCACACCTGAAGTTGTCTTGAAAGCATCTGGGCATGTCGAAAAGTTCACAG
ATCTGATGGTGAAAGATGAGAAAACAGGAATGTGTTATCGGGCAGATCACTTGCTTAAAGATTACTGCAAAGACAAGCTTGAGAAGGATCTACTATTGTCACCAGAGAAGGTGAATGAATTGAAACAAGTGCTGGCGGTTCTAGATGAGCTTTCTGCTGAAGCTTTGGGTGCAAAGATCAAAGAATATGGCATAACTGCC
CCAGATACAAAAAATCCTCTTTCAGATCCCTATCCATTCAATCTTATGTTTGCGACCTCTATAGGCCCATCTGGCTTGAGTCCAGGATATTTACGTCCAGAGACTGCACAGGGCATTTTTGTGAACTTCAAGGACCTTTATTACTACAATGGAAACAAGCTTCCATTTGCAGCTGCACAAATTGGTCAGGCCTTCAGAAA
TGAGATATCACCCCGTCAAGGGCTCTTGAGAGTACGTGAATTCACTCTTGCCGAGATTGAACACTTTGTCAATCCTGATGATAAATCTCATCCAAAGTTCAAAAATGTTGCTAATTTGGAATTTTTCATCTATTCTAGAGAAGAGCAAATGGCTTTAAAATCACCCATAAAGATTCGTCTGGGGGAAGCAGTCACAAAGG
GCACTATTAACAATGAGACTCTGGGGTACTTCATAGGAAGGACTTTCTTGTTTCTAACAGCACTTGGAATTGATAAGGAGCGTCTGCGTTTCAGGCAGCATTTACAAAATGAAATGGCTCATTATGCTGCAGATTGTTGGGATGCAGAAATAGAATGTGTTGGTCTTGCTGACAGATCTGCTTATGACTTGAAGGCGCAC
ACTGAAAAAAGTGCTGTGCCTCTCGTGGCTCATGAAACGTATCCAGAACCCAGGGAGGTAGAGAAATTAGTTATAACTCCAGGAAAGAGAGAGTTGGGGCTGGCATTTAAGAAGAATCAGAAGATGATTATTGAAGCTTTAGAGGCCATGAGTGAAGCAGAAGCTATGGAACTTAAAGCTAATTTGGAGTCTGAAGGGAA
GGCACCATTTCAAGTCTGCACACTGGGCCAAACTGTCACTCTTACGAAGGACATGGTATCTATATCTAAAGAAATAAAAAAAGAGCACCAGAGAGTTTTCACACCTTCTGTGATTGAGCCATCATTTGGTATTGGTAGAATCATTTACTGCTTGTATGAGCACTGCTTTTATACACGACCAAGCAAGGCTGGGGATGAAC
AATACAATGTTTTCAGTTTCCCACCATTATTAGCACCAATAAAATGCACGGTGTTCCCTCTGGTGCAAAATGAGAAATACGAGGTAACAGCTCAACTTATTTCAAAGTCGTTGACTGGAGCAGGCATATCCCACAAGATAGATATAACAGGCACTTCCATTGGCAAGAGATATGCAAGAACAGATGAGTTAGGTGTGCCA
TTTGCAATAACGGTTGACTCAGAAACATCAGTAACCATTAGAGAGAGAGACTCAAAAGAGCAAATACGAGTTTCAGTGGAAGAGGTGGCGTCTGTTGTGAAGGAGGTGACAGAGGCACATAGCACATGGGCAGATGTGCTTTGGAGATACCCAACTCACATAAACAGCACCGCAGATGATTAATTTCAGTGCAATTTAAC
AAGGGATCTTGTTGAAAGGCTCTTGCCTTTCCCTCCAATTTGCAAAATGAGAAGCTCACACAAAGCACTTATGTATCTATTTTACTTCAAAGCATACAAGGTGCATTTTTATGGTGCCCTCCAGTATCATCTGAACATTATTTATTACTATTTTGACTAGTGATTACTAATTCGTTTTGTCTGTTGAAGAGTTTGATAAA
TTGTTTTGCAAAAAATAAGTTGTTTGCGGCTGTTGGAGCAAATGTTTTTAAGTTGTACATAGTTTATTAGGTTTCTGGTTACATCATTGATATGTTACATTGGCAGTATTTCGCTTTCTGGGCTATATATGCTCAATAAATGTCACAATATGCTGTGATGCTGGGCG
>TRINITY_DN110638_c0_g1_i4 from sample A3 / Example unspliced isoform:CGGAGCACTAGCCGACCATATTGTTTGGGGATTCCAAATTTACAACAGCCGCAAGTTGCAACCCTCGCTAAAACCCCAATACCACGTTATCAACGGATTCATATATAAACCAGAAAATCCGTACTCTTAGCAAACCCTAGTCAGCTTCTGACACTGATGAAGCCGAAGCCTGGATTGCATGCATCCAATCCAAGCCTTCT
CCTTTAGAGTCTTCAAATTCGCCATCAAAAACCCACCTTGCACCCGTTTTCAGATCTTAAATCGCCTCATCAGAAACCCAATTTCTGGACTTGCCAGGGTCTACAGTACTGCAGCAGCAACAATGGGGACCGTGGAGAACAACGTTGAATCCCTGAGAAAATCAGTCATTGAAAAACAGAACATAGTGGATAAGCAAGGC
GACGAAGTTCGCGCCCTGAAGGCTTCCAAGGCTTCAAAGGCGGCCATCGAGCAGGCCGTCAATCAATTGAAGGAGTTGAAGTTAGAGCTGCAATCTGTATCTAGAGAACTTCAATCCAGGCTTTCCGAGGACAGTGGAGCTTCTATGAGCAAAGAGGCTTTCAGGCAAGCCGTTAACAATACGTTGGAGCGGAGGTTGTT
TTACATACCCTCCTTCAAGATTTACAGAGGAGTTGCTGGGTTGTATGATTATGGGCCTCCGGGCTGTGCTGTCAAGGCTAATGTCATTGCCTTTTGGCGACAGCACTATGTCTTAGAAGAGAATATGTTGGAGGTTGATTGTCCATGTGTCACACCTGAAGTTGTCTTGAAAGCATCTGGGCATGTCGAAAAGTTCACAG
ATCTGATGGTGAAAGATGAGAAAACAGGAATGTGTTATCGGGCAGATCACTTGCTTAAAGATTACTGCAAAGACAAGCTTGAGAAGGATCTACTATTGTCACCAGAGAAGGTGAATGAATTGAAACAAGTGCTGGCGGTTCTAGATGAGCTTTCTGCTGAAGCTTTGGGTGCAAAGATCAAAGAATATGGCATAACTGCC
CCAGATACAAAAAATCCTCTTTCAGATCCCTATCCATTCAATCTTATGTTTGCGACCTCTATAGGCCCATCTGGCTTGAGTCCAGGATATTTACGTCCAGAGACTGCACAGGGCATTTTTGTGAACTTCAAGGACCTTTATTACTACAATGGAAACAAGCTTCCATTTGCAGCTGCACAAATTGGTCAGGCCTTCAGAAA
TGAGgtttactatctgttctatcatttgctgatttctctttcaaactttgtttctcatgcctcatttaattgctgtttctgtgtgcattcattgtgcattaaaattgctttggaatgactgttagctgtaaaccttacagATATCACCCCGTCAAGGGCTCTTGAGAGTACGTGAATTCACTCTTGCCGAGATTGAACAC
TTTGTCAATCCTGATGATAAATCTCATCCAAAGTTCAAAAATGTTGCTAATTTGGAATTTTTCATCTATTCTAGAGAAGAGCAAATGGCTTTAAAATCACCCATAAAGATTCGTCTGGGGGAAGCAGTCACAAAGGGCACTATTAACAATGAGACTCTGGGGTACTTCATAGGAAGGACTTTCTTGTTTCTAACAGCACT
TGGAATTGATAAGGAGCGTCTGCGTTTCAGGCAGCATTTACAAAATGAAATGGCTCATTATGCTGCAGATTGTTGGGATGCAGAAATAGAGTGTTCCTATGGATGGGTTGAATGTGTTGGTCTTGCTGACAGATCTGCTTATGACTTGAAGGCGCACACTGAAAAAAGTGCTGTGCCTCTCGTGGCTCATGAAACGTATC
CAGAACCCAGGGAGGTAGAGAAATTAGTTATAACTCCAGGAAAGAGAGAGTTGGGGCTGGCATTTAAGAAGAATCAGAAGATGATTATTGAAGCTTTAGAGGCCATGAGTGAAGCAGAAGCTATGGAACTTAAAGCTAATTTGGAGTCTGAAGGGAAGTCATCATTTCAAGTCTGCACACTGGGCCAAACTGTCACTCTT
ACGAAGGACATGGTATCTATATCTAAAGAAATAAAAAAAGAGCACCAGAGAGTTTTCACACCTTCTGTGATTGAGCCATCATTTGGTATTGGTAGAATCATTTACTGCTTGTATGAGCACTGCTTTTATACACGACCAAGCAAGGCTGGGGATGAACAATACAATGTTTTCAGTTTCCCACCATTATTAGCACCAATAAA
ATGCACGGTGTTCCCTCTGGTGCAAAATGAGAAATACGAGGTAACAGCTCAACTTATTTCAAAGTCGTTGACTGGAGCAGGCATATCCCACAAGATAGATATAACAGGCACTTCCATTGGCAAGAGATATGCAAGAACAGATGAGTTAGGTGTGCCATTTGCAATAACGGTTGACTCAGAAACATCAGTAACCATTAGAG
AGAGAGACTCAAAAGAGCAAATACGAGTTTCAGTGGAAGAGGTGGCGTCTGTTGTGAAGGAGGTGACAGAGGCACATAGCACATGGGCAGATGTGCTTTGGAGATACCCAACTCACATAAACAGCACCGCAGATGATTAATTTCAGTGCAATTTAACAAGGGATCTTGTTGAAAGGCTCTTGCCTTTCCCTCCAATTTGC
AAAATGAGAAGCTCACACAAAGCACTTATGTATCTATTTTACTTCAAAGCATACAAGGTGCATTTTTATGGTGCCCTCCAGTATCATCTGAACATTATTTATTACTATTTTGACTAGTGATTACTAATTCGTTTTGTCTGTTGAAGAGTTTGATAAATTGTTTTGCAAAAAATAAGTTGTTTGCGGCTGTTGGAGCAAAT
GTTTTTAAGTTGTACATAGTTTATTAGGTTTCTGGTTACATCATTGATATGTTACATTGGCAGTATTTCGCTTTCTGGGCTATATATGCTCAATAAATGTCACAATATGCTGTGATGCTGGGCG
Intron 2 GTGAGTAACA ... TTTTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 16.92 | 54 | 0 | 11 |
| A2 | 18.33 | 49 | 0 | 11 |
| A3 | 8.62 | 53 | 0 | 5 |
| A4 | 14.71 | 29 | 1 | 5 |
| A5 | 5.26 | 18 | 0 | 1 |
| A6 | 11.81 | 112 | 0 | 15 |
| A7 | 15.48 | 142 | 0 | 26 |
| A8 | 16.39 | 102 | 0 | 20 |
| A9 | 10.43 | 103 | 0 | 12 |
| A10 | 20.2 | 79 | 0 | 20 |
>TRINITY_DN122661_c0_g1_i3 from sample A1 / Example spliced isoformCCCCGCCCCCCTTGTTTTGGTATTGTTATTATATTTCAAGATGATTGATGTTGTCAGTTGTCACCATGCAGCAATCGTGCCTTTCCCTAGTTTGAGACACTCTGTTATCTCGGTTGTTTACAACACTCTAGAAAGATCCCTTGAAACAGTTAGCTTTAATGGGGTCTGAAATGCCCCCTTCTTTACCAACCAACCAATAC
TGGTAATTAGTAATTGTTTATTTACTATTTGTTTGGGCTATTTGTGGTTCCTGCTCTTAGCTTTTGCTCATCTATTCATAGACCTACTGCTCCTCTCATTCTGATATCTAGCAGAGCCACAATGTTGTGATAAATTACTTTAAACTGATAGGTGGATGTGGTGTGTAGTACATGGCTATGTCTTGTAATATTGCATTTTG
TACAGTATAATATCAATTTAATTGCCTATAGTTTAGAATCCGGAAACATTTATAACATTATTTAATTTTGCAGCACTATGTCTTAGAAGAGAATATGTTGGAGGTTGATTGTCCATGTGTCACACCTGAAGTTGTCTTGAAAGCATCTGGGCATGTCGAAAAGTTCACAGATCTGATGGTGAAAGATGAGAAAACAGGAA
TGTGTTATCGGGCAGATCACTTGCTTAAAGATTACTGCAAAGACAAGCTTGAGAAGGATCTACTATTGTCACCAGAGAAGGTGAATGAATTGAAACAAGTGCTGGCGGTTCTAGATGAGCTTTCTGCTGAAGCTTTGGGTGCAAAGATCAAAGAATATGGCATAACTGCCCCAGATACAAAAAATCCTCTTTCAGATCCC
TATCCATTCAATCTTATGTTTGCGACCTCTATAGGCCCATCTGGCTTGAGTCCAGGATATTTACGTCCAGAGACTGCACAGGGCATTTTTGTGAACTTCAAGGACCTTTATTACTACAATGGAAACAAGCTTCCATTTGCAGCTGCACAAATTGGTCAGGCCTTCAGAAATGAGATATCACCCCGTCAAGGGCTCTTGAG
AGTACGTGAATTCACTCTTGCCGAGATTGAACACTTTGTCAATCCTGATGATAAATCTCATCCAAAGTTCAAAAATGTTGCTAATTTGGAATTTTTCATCTATTCTAGAGAAGAGCAAATGGCTTTAAAATCACCCATAAAGATTCGTCTGGGGGAAGCAGTCACAAAGGGCACTATTAACAATGAGACTCTGGGGTACT
TCATAGGAAGGACTTTCTTGTTTCTAACAGCACTTGGAATTGATAAGGAGCGTCTGCGTTTCAGGCAGCATTTACAAAATGAAATGGCTCATTATGCTGCAGATTGTTGGGATGCAGAAATAGAGTGTTCCTATGGATGGGTTGAATGTGTTGGTCTTGCTGACAGATCTGCTTATGACTTGAAGGCGCACACTGAAAAA
AGTGCTGTGCCTCTCGTGGCTCATGAAACGTATCCAGAACCCAGGGAGGTAGAGAAATTAGTTATAACTCCAGGAAAGAGAGAGTTGGGGCTGGCATTTAAGAAGAATCAGAAGATGATTATTGAAGCTTTAGAGGCCATGAGTGAAGCAGAAGCTATGGAACTTAAAGCTAATTTGGAGTCTGAAGGGAAGTCATCATT
TCAAGTCTGCACACTGGGCCAAACTGTCACTCTTACGAAGGACATGGTATCTATATCTAAAGAAATAAAAAAAGAGCACCAGAGAGTTTTCACACCTTCTGTGATTGAGCCATCATTTGGTCTTGGTAGAATCATTTACTGCTTGTATGAGCACTGCTTTTATACACGACCAAGCAAGGCTGGGGATGAACAATACAATG
TTTTCAGTTTCCCACCATTATTAGCACCAATAAAATGCACGGTGTTCCCTCTGGTGCAAAATGAGAAATACGAGGTAACAGCTCAACTTATTTCAAAGTCGTTGACTGGAGCAGGCATATCCCACAAGATAGATATAACAGGCACTTCCATTGGCAAGAGATATGCAAGAACAGATGAGTTAGGTGTGCCATTTGCAATA
ACGGTTGACTCAGAAACATCAGTAACCATTAGAGAGAGAGACTCAAAAGAGCAAATACGAGTTTCAGTGGAAGAGGTGGCGTCTGTTGTGAAGGAGGTGACAGAGGCACATAGCACATGGGCAGATGTGCTTTGGAGATACCCAACTCACATAAACAGCACCGCAGATGATTAATTTCAGTGCAATTTAACAAGGGATCT
TGTTGAAAGGCTCTTGCCTTTCCCTCCAATTTGCAAAATGAGAAGCTCACACAAAGCACTTATGTATCTATTTTACTTCAAAGCATACAAGGTGCATTTTTATGGTGCCCTCCAGTATCATCTGAACATTATTTATTACTATGTTGACTAGTGATTACTCATTCGTTTTGTCTGTTGAAGAGTTTGATAAATTGTTTTGC
AAAAAATAAGTTGTTTGCGGCTGTTGGAGCAAATGTTTTTAAGTTGTACATAGTTTATTAGGTTTCTGGTTACATCATTGATATGTTACATTGGCAGTATTTCGCTTTCTGGGCTATATATGCTCAATAAATGTCACAATATGCTGTGATGCTGGGTGTGGCAAGTTAGATTATCTATTTGATTGTGAATAATTTGCATC
TCAGTTGTGGGATTGGTATCCTCTATACAAATTGCTATGGTGTTAGATAAAGTGACCCTGATGGCCTGGTACACTGTTGCTGTTGGTTAATCATGTCATGACAGTTCAT
>TRINITY_DN122661_c0_g1_i4 from sample A1 / Example unspliced isoform:ATCCAGAACCCAGGGAGGTAGAGgtgagtaacagcaatgaatgccttctttttgttatttatgttggtacagacaatttattgctggcttttttgtgcagAAATTAGTTATAACTCCAGGAAAGAGAGAGTTGGGGCTGGCATTTAAGAAGAATCAGAAGATGATTATTGAAGCTTTAGAGGCCATGAGTGAAGCAGAAG
CTATGGAACTTAAAGCTAATTTGGAGTCTGAAGGGAAGTCATCATTTCAAGTCTGCACACTGGGCCAAACTGTCACTCTTACGAAGGACATGGTATCTATATCTAAAGAAATAAAAAAAGAGCACCAGAGAGTTTTCACACCTTCTGTGATTGAGCCATCATTTGGTCTTGGTAGAATCATTTACTGCTTGTATGAGCAC
TGCTTTTATACACGACCAAGCAAGGCTGGGGATGAACAATACAATGTTTTCAGTTTCCCACCATTATTAGCACCAATAAAATGCACGGTGTTCCCTCTGGTGCAAAATGAGAAATACGAGGTAACAGCTCAACTTATTTCAAAGTCGTTGACTGGAGCAGGCATATCCCACAAGATAGATATAACAGGCACTTCCATTGG
CAAGAGATATGCAAGAACAGATGAGTTAGGTGTGCCATTTGCAATAACGGTTGACTCAGAAACATCAGTAACCATTAGAGAGAGAGACTCAAAAGAGCAAATACGAGTTTCAGTGGAAGAGGTGGCGTCTGTTGTGAAGGAGGTGACAGAGGCACATAGCACATGGGCAGATGTGCTTTGGAGATACCCAACTCACATAA
ACAGCACCGCAGATGATTAATTTCAGTGCAATTTAACAAGGGATCTTGTTGAAAGGCTCTTGCCTTTCCCTCCAATTTGCAAAATGAGAAGCTCACACAAAGCACTTATGTATCTATTTTACTTCAAAGCATACAAGGTGCATTTTTATGGTGCCCTCCAGTATCATCTGAACATTATTTATTACTATGTTGACTAGTGA
TTACTCATTCGTTTTGTCTGTTGAAGAGTTTGATAAATTGTTTTGCAAAAAATAAGTTGTTTGCGGCTGTTGGAGCAAATGTTTTTAAGTTGTACATAGTTTATTAGGTTTCTGGTTACATCATTGATATGTTACATTGGCAGTATTTCGCTTTCTGGGCTATATATGCTCAATAAATGTCACAATATGCTGTGATGCTG
GGTGTGGCAAGTTAGATTATCTATTTGATTGTGAATAATTTGCATCTCAGTTGTGGGATTGGTATCCTCTATACAAATTGCTATGGTGTTAGATAAAGTGACCCTGATGGCCTGGTACACTGTTGCTGTTGGTTAATCATGTCATGACAGTTCAT