NA ----> NA

Intron 1 GTATGTCCTG ... ATATTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	43.03	47	43	28
A2	36.53	53	36	25
A3	23.53	52	25	7
A4	44.44	25	20	20
A5	23.33	23	8	6
A6	5.44	165	9	10
A7	12.42	261	33	41
A8	9.64	300	27	37
A9	7.05	211	15	17
A10	6.8	274	20	20

>TRINITY_DN45031_c2_g6_i2 from sample A8 / Example spliced isoform

GTTTTGTTTGGATTTCTTCTTTTATGTTATGTGTTTTGGCGTGTGGGTTTTTATTTCTTGGGTGGAGAGAAAAGATGTTCCTACAAAATACAACAAATGGAAGTTCATAAGCTCTGTTGTGTAGCGCAGAGGCAAAGTTATAAGAACGTATATGTGGAAGAATTTCAGCTACCGTGGAATTTCAAGATAATAACAGGCGT
ATTTCAGTTACTGCAGAATATCACTACTTCGG

>TRINITY_DN45031_c2_g6_i1 from sample A8 / Example unspliced isoform:

GTTTTGTTTGGATTTCTTCTTTTATGTTATGTGTTTTGGCGTGTGGGTTTTTATTTCTTGGGTGGAGAGAAAAGATGTTCCTACAAAATACAACAAATGGAAGTTCATAAGgtatgtcctgtttaaataaattattctttgatcgcactgtcttttatttgtggaatatattttttttcaaccgatttgtggaatatatt
atacggctagttttattattttattgttgttttaataatattttcagCTCTGTTGTGTAGCGCAGAGGCAAAGTTATAAGAACGTATATGTGGAAGAATTTCAGCTACCGTGGAATTTCAAGATAATAACAGGCGTATTTCAGTTACTGCAGAATATCACTACTTCGG

Intron 2 GTATGTCCTG ... TGTAGCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	29.17	85	43	27
A2	25	93	36	26
A3	15.53	87	25	7
A4	30.77	45	20	20
A5	20	28	8	6
A6	3.63	292	9	13
A7	7.16	473	33	40
A8	6.45	493	27	41
A9	4.1	374	15	17
A10	5.08	467	20	30

>TRINITY_DN45031_c2_g6_i3 from sample A8 / Example spliced isoform

GTTTTGTTTGGATTTCTTCTTTTATGTTATGTGTTTTGGCGTGTGGGTTTTTATTTCTTGGGTGGAGAGAAAAGATGTTCCTACAAAATACAACAAATGGAAGTTCATAAGAGGCAAAGTTATAAGAACGTATATGTGGAAGAATTTCAGCTACCGTGGAATTTCAAGATAATAACAGGCGTATTTCAGTTACTGCAGAA
TATCACTACTTCGG

>TRINITY_DN45031_c2_g6_i1 from sample A8 / Example unspliced isoform:

GTTTTGTTTGGATTTCTTCTTTTATGTTATGTGTTTTGGCGTGTGGGTTTTTATTTCTTGGGTGGAGAGAAAAGATGTTCCTACAAAATACAACAAATGGAAGTTCATAAGgtatgtcctgtttaaataaattattctttgatcgcactgtcttttatttgtggaatatattttttttcaaccgatttgtggaatatatt
atacggctagttttattattttattgttgttttaataatattttcagctctgttgtgtagcgcagAGGCAAAGTTATAAGAACGTATATGTGGAAGAATTTCAGCTACCGTGGAATTTCAAGATAATAACAGGCGTATTTCAGTTACTGCAGAATATCACTACTTCGG