NA ----> NA
Intron 1 GTAACTTCAA ... ACCTTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 93.75 | 1 | 15 | 1 |
| A2 | 86.67 | 2 | 13 | 1 |
| A3 | 68.42 | 6 | 13 | 2 |
| A4 | 81.25 | 3 | 13 | 1 |
| A5 | 55.56 | 4 | 5 | 0 |
| A6 | 78.85 | 33 | 123 | 20 |
| A7 | 75.89 | 27 | 85 | 13 |
| A8 | 70.25 | 36 | 85 | 18 |
| A9 | 76.58 | 26 | 85 | 15 |
| A10 | 71.28 | 27 | 67 | 13 |
>TRINITY_DN38182_c0_g1_i2 from sample A6 / Example spliced isoformGTTTTATTTGTTTGTTGTATGGGCAGAGCACCACCACTCTGTTTTGCACAGTGCAGCATTCAGCAAGCAAACACAGCTGTGGAGTCTCAAAGCCCTTAAGCGAAGTTACGGGATGGTGCTCGCTAACTTCAATGGTGCTGGCGTGGGATTTGGTTTTGGCGTGGGTTGTGGTTTCGGCATCGGCTGGGGATTTGGAGGGA
ATTCACTCCAGACATTGGGCCTTGGTGTAGGTGGAGGCTGTGGAGTTGGATTAGGCCTTGGATGGGGTTTCGGTGCTGCCTATGGCACTCATTATGTATCTTCAAAAGCCAAATTTCAAGGCATTGACTATGAGAGTGTGAAAACTATTCACGAGAAAGATAAGTCTAAAATGTTGATGAAGGAGACTCAGAACCGGGGA
GAATAAATAGACTATGGTTCCTGCCGGGCATGCGATCAGGACATTTAAATATCCTGCAATGTAATCACTGGAATGGGAATAGTCTTGCAGTGTGGTCAGTAATTTTTTCTGAGATAAACATTAAAGCATCCTTATTTATACTCAGAATTATCATGCATGTGCAATTTTCGTTTGTAATATCTTATCAATTTCAATACTGT
TTTCGACGTTCGTGAGTCATCTCTGTGAGAGTTTCTATTGTTTGTGGTGTCCTAGTGAAAGGAACTTATCTTGTTATGTGACTGTATTCTTATTTCTGG
>TRINITY_DN38182_c0_g1_i1 from sample A6 / Example unspliced isoform:GTTTTATTTGTTTGTTGTATGGGCAGAGCACCACCACTCTGTTTTGCACAGTGCAGCATTCAGCAAGCAAACACAGCTGTGGAGTCTCAAAGCCCTTAAGCGAAGTTACGGGATGGTGCTCGCTAACTTCAATGGTGCTGGCGTGGGATTTGGTTTTGGCGTGGGTTGTGGTTTCGGCATCGGCTGGGGATTTGGAGGGA
ATTCACTCCAGACATTGGGCCTTGGTGTAGGTGGAGGCTGTGGAGTTGGATTAGGCCTTGGATGGGGTTTCGGTGCTGCCTATGGCACTCATTATGTATCTTCAAAAGCCAAATTTCAAGGCATTGACTATGAGAGTGTGAAAACTATTCACGAGAAAGATAAGTCTAAAATGTTGATGAAGGAGACTCAGAACCGGGGA
GAATAAATAGACTATGgtaacttcaagcttgtgggttttaggaatgaaatttcttgttttgggtgttggatatgattgactgctctgagaattttgatgttagaattgatggaaaattattcgtttctgtaatcctgactatgagtccgagggttgtggttgaagtgttttctttgcaccaaagcgttaagcttctgaat
ttatactaggaatcataatgcattttctatcttgtacttatgaaacgtcaatattcattctgaacgaatataagtgtgggttattcatacttgctatacgagacatttttatgcagctcccatggagagattgatagagtattcctaacaggggccaaaattgggaacaagtgttgaagtggtcaaaattttctaaggat
aatgtcttgctgattattattgtattccgacattagaaaagtacctaaaatgagggagtaaaactcttttacatgtggtaaaacaaccatgaggatgatttttatatatataccttgacagGTTCCTGCCGGGCATGCGATCAGGACATTTAAATATCCTGCAATGTAATCACTGGAATGGGAATAGTCTTGCAGTGTGG
TCAGTAATTTTTTCTGAGATAAACATTAAAGCATCCTTATTTATACTCAGAATTATCATGCATGTGCAATTTTCGTTTGTAATATCTTATCAATTTCAATACTGTTTTCGACGTTCGTGAGTCATCTCTGTGAGAGTTTCTATTGTTTGTGGTGTCCTAGTGAAAGGAACTTATCTTGTTATGTGACTGTATTCTTATTT
CTGG