sp|P11432|ELI_PEA ----> Early light-induced protein, chloroplastic

Intron 1 GTAAGCGATT ... ATTAATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	25.25	37	5	20
A2	21.52	31	4	13
A3	13.25	36	5	6
A4	19.15	19	1	8
A5	23.64	21	0	13
A6	16.55	290	40	75
A7	10.89	45	2	9
A8	14.29	39	3	10
A9	21.4	90	10	39
A10	17.89	39	7	10

>TRINITY_DN123234_c0_g3_i2 from sample A1 / Example spliced isoform

TGTAGCTGTTCTTTCTCCATTAAGCAATTACTTTATCTCATTACTGATACATAGAATTCATTACAATATCGCGATGGCCACTGTAAATGCAACATTGATGGCGATGAATGGAGCATCCCTCCTACAACGGAGGCCAGCGGAGAGGTCCACACCATCCCTCCTACAACGGAGGCCAGCGGAGAGGTCAACAGCCTCCAGGT
GCCTTCGAGTGAAGTGCATGGCAGAGCCCAAGGAGTCCAAGCAATACACTTCTATCTCTCCTGAGAAGGTGAGCACCAAGTTTGAGGACGTGTTTGCTTTTGATGGGCCAGCGCCGGAGACCATAAATGGGAGACTGGCCATGCTCGGATTCGTCTCGGCTGTCGGGGTTGAGATAGCGAGCGGGAGAGACCTCTTCTCT
CAGCTGGCCAGCGGAGGAGTTCCATTGTTTGTTGGAAGCGCGGTTCTGCTGTCAGTTGCTTCGGTGATACCCATGTTCAAGGGAATCTCCAAAGAGAGCAAATCAAAGGCAATATGGTCTTCTGGAGCAGAAATGTTGAATGGGCGTTATGCCATGCTTGGCCTAGTTGCGTTGGCACTCACTGAATACCTCAAGGGAGG
TCCTCTCATCTCATGATCATCATCTGAGAATACACAGGGAGGTCCTCTGTCTGAGAGTAGGATGTAATCATACACAGCTTGTAAAGGAGATAATACTGTAAAGGAGATAATACTGTAACAAATAGTTTTCGCAATTTATATAATGTTTGAGACGTATATCC

>TRINITY_DN123234_c0_g3_i1 from sample A1 / Example unspliced isoform:

TGTAGCTGTTCTTTCTCCATTAAGCAATTACTTTATCTCATTACTGATACATAGAATTCATTACAATATCGCGATGGCCACTGTAAATGCAACATTGATGGCGATGAATGGAGCATCCCTCCTACAACAGAGGCCAGCGGAGAGGTCCACACCATCCCTCCTACAACGGAGGCCAGCGGGGAGGTCAACAGCCTCCAGGG
GTCTTCGAGTGAAATGCATGGCAGAGCCCAAGGAGTCCAAGCAATACACTTCTATCTCTCCTGAGAAGgtaagcgattaaccgtcattttttacatgcaaatacactgcactgtccaagctctgaaataaattaaccagacaccattaatgcagGTGAGCACCAAGTTTGAGGACGTGTTTGCTTTTGATGGGCCAGCGC
CGGAGACCATAAATGGGAGACTGGCCATGCTCGGATTCGTCTCGGCTGTCGGGGTTGAGATAGCGAGCGGGAGAGACCTCTTCTCTCAGCTGGCCAGCGGAGGAGTTCCATTGTTTGTTGGAAGCGCGGTTCTGCTGTCAGTTGCTTCGGTGATACCCATGTTCAAGGGAATCTCCAAAGAGAGCAAATCAAAGGCAATA
TGGTCTTCTGGAGCAGAAATGTTGAATGGGCGTTATGCCATGCTTGGCCTAGTTGCGTTGGCACTCACTGAATACCTCAAGGGAGGTCCTCTCATCTCATGATCATCATCTGAGAATACACAGGGAGGTCCTCTGTCTGAGAGTAGGATGTAATCATACACAGCTTGTAAAGGAGATAATACTGTAAAGGAGATAATACT
GTAACAAATAGTTTTCGCAATTTATATAATGTTTGAGACGTATATCC