sp|Q9M086|DCAF1_ARATH ----> DDB1- and CUL4-associated factor homolog 1

Intron 1 GTGTCTTGGT ... CTGTTTGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	25.23	243	41	77
A2	22.01	164	29.5	43
A3	22.16	167	32.5	43
A4	18.98	167	20	36
A5	24.49	107	13	32
A6	16.11	12.5	2.5	2
A7	18.93	95.5	14	21
A8	31.53	17.5	0.5	7
A9	23.01	64	4.5	17
A10	18.62	54.5	5	11

>TRINITY_DN108990_c0_g1_i2 from sample A1 / Example spliced isoform

TCGTTGGCCAGCAGTAGAGAAATTCCTTAACTGCAATGGGCATACAATTCTTTTGGAACTGAGTCAGGCACCTCCTGGTGAACGGTACTTGCATGAGTTAGCCTTGTTTGCATTGGGGGTCTTGCACATTGTCACTTTGGTACCAAATGCCCGCAGGCTTATAGTAGGTGCAACATTGAGTAATGAACGGCTGGGAATGG
CAGTCATACTGGATGCAGCAAGTGGTGCTACCTATGGGGATCCTGAACAGGTTATTTATTCAGCCTTGCTTGTGTTGGTCAATCTTGTTTGCCCTCCTCCGTCTCTTAGCAGCAAACCAGTTCCTGTGCTACAGGGCCAAAATGCACTTTCCAGTCAAGTTCCAAATGGTCCTCTTTCAGAAGGTAGAGAGAGGAATATT
GATAAGACTATCACAGAACGCACGGTGTTGCTGGCCAGTCAGGATCCAAATTACAATGGAGAACGTAATGGGATAGTTGCTCAATCTGTTCCTCCTGGAAGTAGCCAGGTAGCTGCACCGTCTCCC

>TRINITY_DN108990_c0_g1_i1 from sample A1 / Example unspliced isoform:

TCGTTGGCCAGCAGTAGAGAAATTCCTTAACTGCAATGGGCATACAATTCTTTTGGAACTGAGTCAGgtgtcttggtttttgtggtttccttttcttaattatttataggatgtggttagtatgtgtgctaattgatgctcagcttcaagtaatatctttatattgtgtcatctgtttgtagGCACCTCCTGGTGAACGG
TACTTGCATGAGTTAGCCTTGTTTGCATTGGGGGTCTTGCACATTGTCACTTTGGTACCAAATGCCCGCAGGCTTATAGTAGGTGCAACATTGAGTAATGAACGGCTGGGAATGGCAGTCATACTGGATGCAGCAAGTGGTGCTACCTATGGGGATCCTGAACAGGTTATTTATTCAGCCTTGCTTGTGTTGGTCAATCT
TGTTTGCCCTCCTCCGTCTCTTAGCAGCAAACCAGTTCCTGTGCTACAGGGCCAAAATGCACTTTCCAGTCAAGTTCCAAATGGTCCTCTTTCAGAAGGTAGAGAGAGGAATATTGATAAGACTATCACAGAACGCACGGTGTTGCTGGCCAGTCAGGATCCAAATTACAATGGAGAACGTAATGGGATAGTTGCTCAAT
CTGTTCCTCCTGGAAGTAGCCAGGTAGCTGCACCGTCTCCC