sp|Q9FL12|DEGP9_ARATH ----> Protease Do-like 9
Intron 1 GTACTATATG ... AGTATTGCAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 9 | 2 |
| A2 | 100 | 0 | 1 | 0 |
| A3 | 20 | 6 | 3 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 1 | 0 |
| A6 | 100 | 0 | 3 | 2 |
| A7 | 54.55 | 5 | 6 | 6 |
| A8 | 66.67 | 2 | 3 | 5 |
| A9 | 45.45 | 3 | 4 | 1 |
| A10 | 11.11 | 4 | 1 | 0 |
>TRINITY_DN45320_c0_g2_i4 from sample A7 / Example spliced isoformCAGCCCTTGATTCAGGGCTGAGAATGGAACTGGGAGCTGTCTGTGCTCAAACTTGTATGGAAGAATGAAAGAGTTGATTAAGGCTGTGCGCTCTGTGAAGGAGTTTTCCATATTGGACGAGGTAGAGGCACTAGCATTGCAGCAGAAATGGCACAACCATCGCGTGGAAGGAGTTTCCCGGATTGGACGAGGTAGAGGCA
CAGGCATTGCAGCAGAAATGGCGCAACCATCACGTGGAAGGAATTTCCCCGATTGGAGGAGGTAGAGGCACGGGAATTGCAGTAGAAATGGCGCAACCATCATGTGGAAGAGTTCAAAATATTCTACCGAAGCTTGGCGCTGTTGCAAGAAGAATGAAAGGGAGAAGTAATAACTTGCTCTCCAGGATACCACGACTTTT
CTATGGAGTGTTGGGTGGGCTAAGCCAATTCAGCATTATCATTAAGGCGAGAATCATTCTTCAACGTGCTCCCCACATGGTGAGATGGATGAGGCTCATTTACTTAGACTTCGGGGACTTTTCATGTGACCAAGAGATTCTCATTTCTCTCCCTGAGGACAAATCTTTTGACATATTGAGGATTTGTACTTGCCAATGAT
AACGATTTCTTTAATGGTTGGGATTCTGGACCGCTTTCCACCGACGCCACTTTCGATTCTTCGCTCATCTCTCCCGATTCAGGCCCAGTTCTCTATTGTCTCGAGGTGGCCTTATATTATAAAAATGCAACTGATTTCACAGCATTGGACAAGATTAGTTTCAATGATAACATCGTTCTTTCACATGAAGTAAAGTATTT
GGTAGATAATGGTAATTAAGCCATGCAAGCAGTTAGTTGAGTTTTAGTTCAGTAGGAGTCATTTGTATGTAGTGGCATGTAATATGAATGTAATATGAGTTAATTCAATGTAAGTTTAAAGTTTAGGTTTTGCACCTCAGGACCATTTAAATAGAGGTTTTCAGGTCAATTGTAAGCATGAAGTATGATCGGATTTCTTA
TAAATAATAAGAA
>TRINITY_DN45320_c0_g2_i11 from sample A7 / Example unspliced isoform:CAGCCCTTGATTCAGGGCTGAGAATGGAACTGGGAGCTGTCTGTGCTCAAACTTGTATGGAAGAATGAAAGAGTTGATTAAGGCTGTGCGCTCTGTGAAGGAGTTTTCCATATTGGACGAGGTAGAGGCACTAGCATTGCAGCAGAAATGGCACAACCATCGCGTGGAAGGAGTTTCCCGGATTGGACGAGGTAGAGGCA
CAGGCATTGCAGCAGAAATGGCGCAACCATCACGTGGAAGGAATTTCCCCGATTGGAGGAGGTAGAGGCACGGGAATTGCAGTAGAAATGGCGCAACCATCATGTGGAAGAGTTCAAAATATTCTACCGAAGCTTGGCGCTGTTGCAAGAAGAATGAAAGGGAGAAGTAATAACTTGCTCTCCAGGATACCACGACTTTT
CTATGGAGTGTTGGGTGGGCTAAGCCAATTCAGCATTATCATTAAGGCGAGAATCATTCTTCAACGTGCTCCCCACATGgtactatatgagatgttatattcaacattatagattattctgcatctcactattctcagtgcatggtatttactttctataaattctataaaggttgtaggctatgaatatggaataggta
tacagacttgtatctgcgtggattcctcttctgacatgagatttacatggttgggctagacgtgcatgtgcacattatttacatggaaagtttcatgttttcacgtttcagtataagaatctgtctgtaaccttgcaacctctgttgtgcatgccatctcacagaaagtattgcagGTGAGATGGATGAGGCTCATTTAC
TTAGACTTCGGGGACTTTTCATGTGACCAAGAGATTCTCATTTCTCTCCCTGAGGACAAATCTTTTGACATATTGAGGATTTGTACTTGCCAATGATAACGATTTCTTTAATGGTTGGGATTCTGGACCGCTTTCCACCGACGCCACTTTCGATTCTTCGCTCATCTCTCCCGATTCAGGCCCAGTTCTCTATTGTCTCG
AGGTGGCCTTATATTATAAAAATGCAACTGATTTCACAGCATTGGACAAGATTAGTTTCAATGATAACATCGTTCTTTCACATGAAGTAAAGTATTTGGTAGATAATGGTAATTAAGCCATGCAAGCAGTTAGTTGAGTTTTAGTTCAGTAGGAGTCATTTGTATGTAGTGGCATGTAATATGAATGTAATATGAGTTAA
TTCAATGTAAGTTTAAAGTTTAGGTTTTGCACCTCAGGACCATTTAAATAGAGGTTTTCAGGTCAATTGTAAGCATGAAGTATGATCGGATTTCTTATAAATAATAAGAA