sp|Q94A03|CDS4_ARATH ----> Phosphatidate cytidylyltransferase 4, chloroplastic

Intron 1 GTGAGTTCCA ... CTTGATACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	80.77	5	19	23
A2	76.74	10	22	44
A3	91.3	4	39	45
A4	70.73	12	26	32
A5	82.22	4	16	21
A6	78.05	9	22	42
A7	83.89	12	60	65
A8	52.94	4	1	8
A9	86.05	3	14	23
A10	75	9	30	24

>TRINITY_DN74349_c0_g1_i1 from sample A4 / Example spliced isoform

AATCAAAGCCATGCATGACCATCCTGCAATAACACGACTGATTTTATCCTCTATAAATAAATTCTTTAAATTTAATCGCATCTCCTTTCACTTTTATCTGGTCGTTGTTTGGCCGAGATGATATGGTATGTAGATTGCTTAGTTGATATGAAAGAAAATAATCTTGGGCCTATTCCTGAGGTTGCAGTCGATTTATGGCT
GGATCTTTAAGGGATTTGGTTAAGTTGTTTTTCTTATAAATGGGGCGAGGTGGGCATAATTCAATTTGAATTTTTGAGATTGGGTTGGCTGAGATTTTGATAAACCGGCACATAGGCTGAGGTGGGCATCATACAAATTGTATATTTGAGATAGGTTTGTCTGAAATTTTGACAAACAAAGGCCCACAGACCGAGGTGGG
TGTCGTTCAATTTGTATGGATTGGCAGAAATTTTGATAGAAGGGCATACATGCCGAGGTGGACAGAATCCAATTTGTATTTTTGAGATTGGGATGGCTGGAATTTTGATAAAAGGGCATACAGGC

>TRINITY_DN74349_c0_g1_i2 from sample A4 / Example unspliced isoform:

AATCAAAGCCATGCATGACCATCCTGCAATAACACGACTGATTTTATCCTCTATAAATAAATTCTTTAAATTTAATCGCATCTCCTTTCACTTTTATCTGGTCGTTGTTTGGCCGAGATGATATGGTATGTAGATTGCTTAGTTGATATGAAAGAAAATAATCTTGGGCCTATTCCTGAGGTTGCAGTCGATTTATGGCT
GGATCTTTAAGGGATTTGgtgagttccaggccttttggttaatttcttttagcattttagcggatttgtgagttgaaagttgcagaacttgagttggccctggcttgatccattgcacttgatacagGTTAAGTTGTTTTTCTTATAAATGGGGCGAGGTGGGCATAATTCAATTTGAATTTTTGAGATTGGGTTGGCTG
AGATTTTGATAAACCGGCACATAGGCTGAGGTGGGCATCATACAAATTGTATATTTGAGATAGGTTTGTCTGAAATTTTGACAAACAAAGGCCCACAGACCGAGGTGGGTGTCGTTCAATTTGTATGGATTGGCAGAAATTTTGATAGAAGGGCATACATGCCGAGGTGGACAGAATCCAATTTGTATTTTTGAGATTGG
GATGGCTGGAATTTTGATAAAAGGGCATACAGGC