NA ----> NA
Intron 1 GTATCCTTCA ... CGTATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.88 | 141 | 61 | 18 |
| A2 | 17.6 | 103 | 28 | 16 |
| A3 | 22.86 | 108 | 35 | 29 |
| A4 | 23.62 | 118 | 57 | 16 |
| A5 | 20.96 | 66 | 27 | 8 |
| A6 | 22.05 | 1646 | 625 | 306 |
| A7 | 21.86 | 1092 | 417 | 194 |
| A8 | 21.7 | 1360 | 488 | 266 |
| A9 | 21.2 | 1288 | 471 | 222 |
| A10 | 21.15 | 852 | 319 | 138 |
>TRINITY_DN39933_c0_g1_i2 from sample A7 / Example spliced isoformGGCAAAACCCCCTATATAATAATTTTATGGATTATTGTGGTTACAAGAAGTAAAAAAATTGAAAACGACGATCGTTCACAGTCCGAGGAAGCAGCAGCAGCCGTGGAAGAACTCAATCGCTGTGAAGAGGAAAGGAAGAAAGAGGAGCAAAACAGGAACATGGCTGCCCGCAATGGATCTCCTGCACCTGCTTCTGAAAA
GAAGTCGAGCAACTTTGAGAATGAGTTGCTGGCTTTTAGTGCAGAGAACCTGCAGAATAACATGAAAGTTACCTATTATAGCCGCACATTTTTGTCCATCATTGGTGGCGTGGTTGCAGGAATCTTAGGACTGACTGGTTTGAAAGGTTTCATACTCTATTTCATTATCATGGCCGTCAGTTCTCTCGGGGTCATTACCA
AAGCCAAATTTGATGTTCATGAATATTTTGATTCATGGAACCGTGTTATATTGGATGGGATAACAGGTGGACTTATGTCATTCGTTCTATTCTGGACATTTGCCTACGATATTGTGCATATATTCTGAAATATACTATCTTTTATCATTTATTACAGAATGATTTGAAGTGGTAAGCTACAACATTTATTGGAATGAGAG
TGGCAATTCATTTTGTAATGAAATTTTACACTGTAAGGTGGAAGGGGGTATGCAAATCTTGAGAGCAAATTGATCTGCCCCAAGGTTATTTTGAAGAGAGAATAAATCTCTGTTTGGTTCACTTCTTCCAATAAGAATGGTGGTACTTTTTTGGGCTATTCTAAGTTCTAATCTTATCTTTTGATGCTTTTGGTTTTAGT
AATTGCTTGTGCAGCTGCCGACTCTATTTTAGTGTTGATATACAATTTTTTTTCCTATCTACCAAAACCTTTTTTTGCAAAAGAAGAAAGAGGTTCCACATGAGGGAAAATCGTAGAGTGCATGATTATTTGAAAGTGACGAGAGGAAAAACATGTACTCAACAAAGAGGAGGTATTATTTGTTTACAGGGAAAAGATAA
AAACCAGGTTATTTTGAAGAGAATAAATCTCTGTTTGGTTCACTTCTTCCAATAAGAACGGTGTAAGTTTTTTGGGCTATCCAAAGTTATAATCTTATTTTTGAT
>TRINITY_DN39933_c0_g1_i1 from sample A7 / Example unspliced isoform:GGCAAAACCCCCTATATAATAATTTTATGGATTATTGTGGTTACAAGAAGTAAAAAAATTGAAAACGACGATCGTTCACAGTCCGAGGAAGCAGCAGCAGCCGTGGAAGAACTCAATCGCTGTGAAGAGGAAAGGAAGAAAGAGGAGCAAAACAGGAACATGGCTGCCCGCAATGGATCTCCTGCACCTGCTTCTGAAAA
GAAGTCGAGCAACTTTGAGAATGAGTTGCTGGCTTTTAGTGCAGAGAACCTGCAGAATAACATGAAAGTTACCTATTATAGCCGCACATTTTTGTCCATCATTGGTGGCGTGGTTGCAGGAATCTTAGGACTGACTGGTTTGAAAGGTTTCATACTCTATTTCATTATCATGGCCGTCAGTTCTCTCGGGGTCATTACCA
AAGCCAAATTTGATGTTCATGAATATTTTGATTCATGGAACCGTGTTATATTGGATGGGATAACAGGTGGACTTATGTCATTCGTTCTATTCTGGACgtatccttcagcttctagctaaatttattagtatacaaattgttttctatatgcttttttcttatagtgttatatgcatttcttttatagtgcgtgtctttta
tattattcgatcctaatttgttctttttcccacatgatttctttaacgtatttcagATTTGCCTACGATATTGTGCATATATTCTGAAATATACTATCTTTTATCATTTATTACAGAATGATTTGAAGTGGTAAGCTACAACATTTATTGGAATGAGAGTGGCAATTCATTTTGTAATGAAATTTTACACTGTAAGGTGG
AAGGGGGTATGCAAATCTTGAGAGCAAATTGATCTGCCCCAAGGTTATTTTGAAGAGAGAATAAATCTCTGTTTGGTTCACTTCTTCCAATAAGAATGGTGGTACTTTTTTGGGCTATTCTAAGTTCTAATCTTATCTTTTGATGCTTTTGGTTTTAGTAATTGCTTGTGCAGCTGCCGACTCTATTTTAGTGTTGATAT
ACAATTTTTTTTCCTATCTACCAAAACCTTTTTTTGCAAAAGAAGAAAGAGGTTCCACATGAGGGAAAATCGTAGAGTGCATGATTATTTGAAAGTGACGAGAGGAAAAACATGTACTCAACAAAGAGGAGGTATTATTTGTTTACAGGGAAAAGATAAAAACCAGGTTATTTTGAAGAGAATAAATCTCTGTTTGGTTC
ACTTCTTCCAATAAGAACGGTGTAAGTTTTTTGGGCTATCCAAAGTTATAATCTTATTTTTGAT