sp|Q9FG01|ATO_ARATH ----> Splicing factor SF3a60 homolog

Intron 1 GTAGACCACA ... TGTCTGGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	44.44	5	4	1
A2	58.82	7	10	1
A3	61.11	7	11	4
A4	80	2	8	3
A5	72.73	3	8	1
A6	50	5	5	0
A7	50	2	2	0
A8	33.33	6	3	0
A9	83.33	1	5	1
A10	92.86	1	13	11

>TRINITY_DN123096_c0_g1_i2 from sample A2 / Example spliced isoform

GCTGTTGCGTAGTCTTTTATTATTGTCTTTCGTTGACAGTGGAGGCATTAGGGTTTTGAATAAATAAATACAATCGTTCGTTGAACAGATTGAGGTTTAAGAGGACATTGACCACTCCAGGAAGGATGAAATCGCTGCTCTCGAAGGTCAAGGTGTAAGCGAGTAGAACGTTTCTAGTGCATTTTATGATCGCTCACCAT
TAAAGAGGTATGGCTTGAAATCATAAACACCAAATTATTTTTCATGGAGAGTTGACATTTATTTATTTTCGAAGTGCTTCATGAAACATGCCACCAGGGGCTACGTTGCATAGAGTGAACTTCATTCTGCCAAGTGCAAGGTCTGACTGGGGCTATTCTGCCAAAATTGTCCGAGACTTGCACTCGGCCTCAACCCTTTA
AAAGCATGAGCATACTTTCTTTCACTCAAGTGCGAGGTGTTAGGGATAGCATTTTTTATCTGAGCAGGAGGTTCAACCTCTACCGTTTCTTTGGATACTCCCCCTGGTCTGTCACAAATCACTCGCTGGCAGGCACTTAGGGGGTTAGGTAACTGCAGATAAGATACGATAAGATAAAGATGATTTTAAGTCTACCACCT
ATAGGATTGAAGCAACAGATGAAGCAAGCAGGTGGATTTGACCTCGACACCTCTCAGAGTTCCAAAGCATTCGAAGGAGGCCAGTTGCCACCTCACCTAGTTGTCAGGGATAGTTATTTTGCTAAACTCACCGGAGACTTGCATCCAGCCACATCTCTTTGAAAAGAGCATCCTTCCTTTGGTTTATGTGACACGTATGA
GGGGTGGTTATCCTGTCAAAGTGGCCCAGGAATTGCATTTGGCCTTATTTCTTTGCAACTTACGGGTACACTTCCTTTTGCTTAGGTGCCAGGTCCGAGGTGTAGCTATTCAACAAAAATCACCCGGGACATGGACTTGGCCTCATTCCTTTGAAACTCATGAGCATACTTTCTTCAGCTTAAATACCAGGTCTTCGGAT
TAGCTATTCTGCCAGGATCACCTGAGACTTGTATGTCGCTACATAACTTTGAAATTCAGTCTACACGGCTTAGGTGCCAAGTCTTATTTGGGACTTGCACTTGGCATCATTTCCCTTGGAACTTAAGCCATCCAGGCAAGGCAATGATTTGATTGTATTTCTGAAAC

>TRINITY_DN123096_c0_g1_i1 from sample A2 / Example unspliced isoform:

GCTGTTGCGTAGTCTTTTATTATTGTCTTTCGTTGACAGTGGAGGCATTAGGGTTTTGAATAAATAAATACAATCGTTCGTTGAACAGATTGAGGTTTAAGAGGACATTGACCACTCCAGGAAGGATGAAATCGCTGCTCTCGAAGGTCAAGGTGTAAGCGAGTAGAACGTTTCTAGTGCATTTTATGATCGCTCACCAT
TAAAGAGGTATGGCTTGAAATCATAAACACCAAATTATTTTTCATGGAGAGTTGACATTTATTTATTTTCGAAGTGCTTCATGAAACATGCCACCAGGGGCTACGTTGCATAGAGTGAACTTCATTCTGCCAAGTGCAAGGTCTGACTGGGGCTATTCTGCCAAAATTGTCCGAGACTTGCACTCGGCCTCAACCCTTTA
AAAGCATGAGCATACTTTCTTTCACTCAAGTGCGAGGTGTTAGGGATAGCATTTTTTATCTGAGCAGGAGGTTCAACCTCTACCGTTTCTTTGGATACTCCCCCTGGTCTGTCACAAATCACTCGCTGGCAGGCACTTAGGGGGTTAGGTAACTGCAGATAAGATACGATAAGATAAAGATGATTTTAAGTCTACCACCT
ATAGGATTGAAGCAACAGATGAAGCAAGCAGGTGGATTTGACCTCGACACCTCTCAGAGTTCCAAAGCATTCGAAGGAGGCCAGTTGCCACCTCACCTAGTTGTCAGGGATAGTTATTTTGCTAAACTCACCGGAGACTTGCATCCAGCCACATCTCTTTGAAAAGAGCATCCTTCCTTTGGTTTATGTGACACGTATGA
GGGGTGGTTATCCTGTCAAAGTGGCCCAGGAATTGCATTTGGCCTTATTTCTTTGCAACTTACGGGTACACTTCCTTTTGCTTAGGTGCCAGGTCCGAGGTGTAGCTATTCAACAAAAATCACCCGGGACATGGACTTGGCCTCATTCCTTTGAAACTCATGAGCATACTTTCTTCAGCTTAAATACCAGGTCTTCGGAT
TAGCTATTCTGCCAGGATCACCTGAGACTTGTATGTCGCTACATAACTTTGAAATTCAGTCTACACGGCTTAGGTGCCAAGTCTTATTTGGGACTTGCACTTGGCATCATTTCCCTTGGAACTTAAGCCATCCAGGCAAGgtagaccacagcaagaatagaactttgtggatggcatgatactctgttgatgtcaccaat
gaactaatgcctcattgtctggcagGCAATGATTTGATTGTATTTCTGAAAC