NA ----> NA
Intron 1 GTATGTATCT ... TTTGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 2 | 3 |
| A2 | 100 | 0 | 1 | 1 |
| A3 | 61.9 | 4 | 6 | 7 |
| A4 | 38.09 | 2.5 | 1 | 2 |
| A5 | 33.33 | 2 | 0 | 2 |
| A6 | 40.91 | 13 | 2 | 16 |
| A7 | 52 | 15 | 12 | 20.5 |
| A8 | 41.18 | 20 | 8 | 20 |
| A9 | 47.83 | 18 | 7 | 26 |
| A10 | 46.02 | 13.5 | 5 | 18 |
>TRINITY_DN40495_c0_g1_i2 from sample A8 / Example spliced isoformGGCGGATACCTAGCCCCAGAGGTCCACAGATGTGGACATGGAGGAGATGCTGGATCGGTATTGCTTCCCTATGGCAAGAGTGCATAAGAATGCACTTCTGATTTGTGACTTAGAGGAGCCATCAGTTCGAGTGATCGCAGCATGTGTGGTCTGAGTGTTGGGGTCACAGGGGCCCAACCGGGTGTCGGGAGGACAGATGC
AGTTGGTAGAGGGGGTATTACAGGGCACCTTCTTTGCTTGGGGCCAGATATTCCTCACCTATGTTCAGCGGCAGCTAAGTAAGGTGAAGGTAGCTGGAAAGGGGTTCTATTATGGGTCATTTTTGTGTGCTTTCTTCATGGAGCAGGTTCTGACGCTGCAACCGCGAGTACCAATCCGGGCTAGGGGTTTGAGGGAGCCA
CAGATGGTGCGGTGGGGTCAGATGATGCGCCGACGGGGTGGTGGAGAGGTGGAGCGATATTTTACGCGGGAGCTCTATTTGCAGTGGCTGCAGATGCTGGTGGTTTTTGATGATTACCCGTATCACGAGATGGACTACCGGCAAGATTCGAAGGCGCCACGACCCCCATGGCAGGTTTGGGGTCCAGATGATGTGGGACC
GCAGCCACCGCCGGGGCATAGGGAGTGTAGGGGGCACATAGCATTGCTAGCCTTTCCAGACTGGGGGGAGGTGCGACGATAGGATGCAGACGAGACTTTGGAATCCTTGCGAGTTACCTTCAACCGGCTACTGGTTGGGGTCTCTGACAAGGGGTGGCGGGAGCTTGATCGGGAGGTGGTTGAGGCTTGTCCCGAAGCTC
CATGGGATTGGCGGGTGATTCTGATTCTGGTGGCAGTATTGGCCGAGGGGAGGAGGGATCAGGCTCGACAGGGGGATGAGGAGGATCCAGAGGAGGATCCGGAGGAGGAGCCGGAGGAGGAGAGAGGAGAGGATGAGTCCGCAGCAGAGGCGGCTGCGACGGAGAGTGATGATGGTTCAGATGGGAGATATGACTCTCAT
TAGGGGGTGCTGGGGACTCCCCCCGATGCGTATGGGAATTTGGGATTTTTTGTATATACGGCATGTATTTTATGACAGGGATGCTATTGAGGCTCCTTGGTGTATATTTTTGTATATCTGAGTGCTGCGACACTCATGACATTTATATGACGATGATATATTTATATAGATATGCACATGGATGCATTTTTGCGGTGAA
>TRINITY_DN40495_c0_g1_i6 from sample A8 / Example unspliced isoform:CTGAATCCGGTGATATAAGAAACGTCAAAAATGGATAACGACCGAGGTGGCACGTAAACCGAGACGACTAGGGGCTGGTAAAAAATGCCCAAAAAAATCTGGGGGTGAGAGCGAGAAATGATCTCAAGCATCATCACGAGCTCGGAAAACTGAATCCGGTGGTATAAGGAATACTAGAAACTGATAACGGTCGATGTGGC
ATGCAAATCAAGATGGTGAAGGGCATGGAAAAAATTCCAAAAAAAGGGGTATAGAGAAAATGAGAAATCGAGTCGACCATTCAGAAGGTCTCGTCGTTCTGATTCCAGCAGTGGAAACGGTTTGGAAAATGGACTCTGTATGGATCCAAAATGGCCGAATAAAGAAAAAGTCAACTGTCTATAAATAGTAAGTGGACCTA
TAATGCCAAGTGTCATTTGTGCGGTTGACTTTGACAGGAGAGTGTGGTGGGCTAGAGTGGATTTGGCATTTCTGGGCAATCCAACTGGGCGATTTTATTTCCGCGAGTTGCAAGTTTTTCACTGAACTTCTACTTTTAATGTTTTCTCAATTCGGGTGGGTAGTGGGTCCTCAGGGAGGGTGGTATGGTCCACGAGGGGT
GTGGATCGCGCGGTCATGGATCACGGTTGTGGCCTCCACAGCTGCGATACGAGATCACGACTATGGCTTGGATAGCCACGATCTGCGATCGCAGCTGTGGCCTGGACAGCCGCGATCTGCAATCGCGACTATGGCCCCCACATGCGCGATCTGCGATTGCGGCTGTAGTCCTGATAGCCGCGATTTGGGATCACGACATT
GGACCCCATAGCCGTCATCTGGATCGGGATTATGGAGTCATATCGGTGGGGATGATGGTTTGTTTGATAATGTTCTGATGAGGTTTCATTGTGGGATTGACAGGATGCCGAGAGTACTATGGTGAGAGCGCGAGATACCTAATGATATCATGGAGTACATACGGGATGATCAACATGTCCAAGGGACTTTGGGGTTGTGC
GGGGTGTTGAAGTTTGCACAGGTGTCGATGATGTGTTTAGCAGTACTGTTGCTGAACAGGTTGGTGGGCTTCTGGGAGCCCGATATACGGGCCTTCATGGTGCAAGGGGAGAGAATGGAGTTCACCCTGGCAGATGTGTACTTTTTGACGGGACTTCCTTTTTTGGGTAGGGTGGAGGATACCCAGCCACGAAGGTCCGC
GGATGTGGACATGGAGGAGATGCTGGATCGGTATTGCTTCCCTATGGCAAGAGTGCATAAGAATGCACTTCTGATTTGTGACTTAGAGGAGCCATCAGTTTGGGCGATCGCAGCATGTGTGGTCTAAGTGTTGGGGTCACAGGGGCCCAACCGGGTGTCGGGAGGACAGATGCAGTTGGTAGAGGGGGTATTACAGGGCA
CCTTCTTTGCTTGGGGCCAGATATTCCTCACCTATGTTCAGCGGCAGCTAAGTAAGGTGAAGGTAGCTGGAAAGGGGTTCTATTATGGGTCATTTTTGTGTGCTTTCTTCATGGAGCAGGTTCTGACGCTGCAACCGCGAGTACCAATCCGGGCTAGGGGTTTGAGGGAGCCACAGATGGTGCGGTGGGGTCAGATGATG
CGCCGACGGGGTGGTGGAGAGGTGGAGCGATATTTTACGCGGGAGCTCTATTTGCAGTGGCTGCAGATGCTGGTGGTTTTTGATGATTACCCGTATCACGAGATGGACTACCGGCAAGATTCGAAGGCGCCACGACCCCCATGGCAGGTTTGGGGTCCAGATGgtatgtatctagtttcttgattgttttatgttggatg
ttttgaggttagagatatatgatgatgctaaccattttcgatttggtttgatgcagATGTGGGACCGCAGCCACCGCCGGGGCATAGGGAGTGTAGGGGGCACATAGCATTGCTAGCCTTTCCAGACTGGGGGGAGGTGCGACGATAGGATGCAGACGAGACTTTGGAATCCTTGCGAGTTACCTTCAACCGGCTACTGG
TTGGGGTCTCTGACAAGGGGTGGCGGGAGCTTGATCGGGAGGTGGTTGAGGCTTGTCCCGAAGCTCCATGGGATTGGCGGGTGATTCTGATTCTGGTGGCAGTATTGGCCGAGGGGAGGAGGGATCAGGCTCGACAGGGGGATGAGGAGGATCCAGAGGAGGATCCGGAGGAGGAGCCGGAGGAGGAGAGAGGAGAGGAT
GAGTCCGCAGCAGAGGCGGCTGCGACGGAGAGTGATGATGGTTCAGATGGGAGATATGACTCTCATTAGGGGGTGCTGGGGACTCCCCCCGATGCGTATGGGAATTTGGGATTTTTTGTATATACGGCATGTATTTTATGACAGGGATGCTATTGAGGCTCCTTGGTGTATATTTTTGTATATCTGAGTGCTGCGACACT
CATGACATTTATATGACGATGATATATTTATATAGATATGCACATGGATGCATTTTTGCGGTGAA