NA ----> NA
Intron 1 GTAAGATATG ... GGATCCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 62.26 | 20 | 20 | 46 |
| A2 | 68.54 | 14 | 34 | 27 |
| A3 | 73.28 | 15.5 | 45 | 40 |
| A4 | 64.85 | 15 | 19 | 36 |
| A5 | 74.41 | 10 | 34 | 24 |
| A6 | 71.43 | 4 | 9 | 11 |
| A7 | 58.34 | 27.5 | 30 | 47 |
| A8 | 62.91 | 11.5 | 18 | 21 |
| A9 | 71.08 | 17.5 | 49 | 37 |
| A10 | 75 | 12 | 33 | 39 |
>TRINITY_DN36087_c0_g1_i1 from sample A7 / Example spliced isoformCAAGTTTTTTCCCCTGCCGTCACTTTTCATATTTAGGACACCCTGTCATTCCAACTCTCACTGTCTTTATTTTTCCATGTTTATTACCATGAAATTAAGCAAACTCTTAAGATGTCCTCCGACTTTTCACTCTCATTATTATAACCACTGTCGTTGGGGGGTGGGTACACAACGGGAGCCCATCACATTTCTGGGTATCT
TGACACAAATGATATGAGATGGGTTTTGCACCATCTGCATCTGGGCATAGAAATCCTTGGAAACTATGAAGAAAATATCTGGCATCCCATTTACCTATAGAAATCCTTGGAACCTATGAAGAATATATCTGGCATCCCATTTACCCATAGAAATCCTTGGCCATCGCACGTCTCTTCATCCCACGTTGTTTCGGCCAAAG
TTATTCTATGCACCGGTGCATGATTTCAAATTTAAGGCAGGACTGGTGGTGAAGATCCCTTCTGCTGTAAGGGCCTTCTCGAGAAGTTGCAGAGACAGAAGACGAAGGCATGAAGTCGATAAATTCTGCAGAGCCCTTTGGACAGAAACTGATAAAGGTTATTAGCGATGTATGTTTTACATTCTTTGTGCTTGCTGTAC
TGGTAGTCACAGTGATCGCAATAACCTATCAACCGCCAGATCCTTGGCTCGAATCATCAAAAGCAATGTCCAAGGTTTTCTCTTCTGTAGAGAATGCCACATTTAAACAGGATGACTCCATACTCCGCACCGGCGAGGATATTGTTGCTGTTACACCATCCCCAGCTGTTAAAGAGGAGCAACCTGTTACATTGAAAACA
GTTGAATTAGAAGAAAAAAATGTTACTAGTCAGGCACCCACAGCTGATTGTGACCCAAACCAGGCAATAAACTGCTCAGATCCTAAAGTTTTAGTTTTAATCAAGAAGTTTAATTTGAAGGTTTTCAAAAGCATTAATATCTTTGAGTACCAATTGTCTGTTCAAGGGTCCAAACCAAATGAATGTGATGTAGCATGGAG
GTTCAGATCTAAGAAGGAAAAGTCATGGAGGAAGTATAGGGATTTCAGAAGATTCAGTCTGGATTTTGATCTAAATTGCAATTATAAGGTGACAGGCGCTGGCCGGTGGCACTCAGGAAAGAATGCCCGGCCAGTGAAGATGAGAAAAAACACAAGCAACTTCAGCGACCCTAATCATCACATCGCCTCTCCTCCTTTTC
TGGTTATAGATGAAAACATAAATGACACAGTCCCTATGCCTACATCTGAATCTAGTTTCAGGAAGGGAAAATACTTATATTATTCCCATGGAGGAGACTACTGCAAGGGGATGAACCAATACTTGTGGAGTTTTCTCTGTGCACTTGGAGAGGCACAATACCTCAATAGAACATTTGTCATGGATCTTAGTATGTGCCTT
TCTTCAAAGTACACTCCCAGCAACAAGGATGAGGAGGGGAAGGACTTTCGGTACTACTATGACTTTGAGCATTTGAAGGAGAGCACCTCTATCATTGAGGAGGGTCAATTTCTGCAAGAAGTGAAGAAATGGAACAAGGAACATAAAAAGGATCAAATCCCTGTCAGGAAAGTAACTGACTACAAGGTCAGTCCCATGCG
ATTGAAAAGAGACAAAAGTACAATCATTTGGAGGGAATTTGATCAACCGGAGCCTGACAATTATTGGTATCGTGTCTGTGAAGGGCCAGCGGAGAAGTATGTTCAGAGGCCCTGGCATCTGCTGTGGAAATCTAAACGGTTGATGAACATTGTCTCAGCAATCAGTGGAAGCCTTGACTGGGATTATGATGCAGTCCATG
TTGTTAGAGGTGAGAAAGCTGAGAACAAGGAACTTTGGCCCAATCTAGACAGAGATACCTCACCCGATGTAATTTTGAGCAAGCTCACCAATCTAATTCACTATCAGAGGAAATTGTATATTGCTACTAATGAGCCAGATTATAACTATTTTGACAAGTTGAGATCCCAATTCAAGGTCTCTCTCCTGGATGATTATAAA
GATTTATGGGCAAAGAATAGTGAATGGTACAATGAGACTACTCTCCTCAACAAAGGCCAGCCTGTGGATTTTGATGGTTACATGAGAGTGGAAGTAGACACAGAAGTTTTCTTTAGGGCAAAGACTCGCGTGGAGACTTTTAATAACTTGACCAATGATTGCAAGGATGGAATCAATACATGTTAACCTTGATACCAACA
GGGATGAAGAGTGGCCGAGGAGCCAAAGGCACAGCAGATAAATATGACTAATTTCTGAAGTCTGGTCTATCAGTCTTGGCTATTTTCTCTTATCAAGGTTAAATTGTACCACTGGCAAATTTTATTTCTGTTCCCTTCATCAATTTGATTTTCAGTTCTACAATGTATCGAAATCTCATTCAATTATCCAGTTGGAAGCA
TTATTGCCAAGCTTATCTGTAGAGGTTTTCAGAGTTCGTCATTGATATAATTACCATTCTGCCCAGAGGGATATATATTGCGATAAGAAATTGGTTCCTGACTCCTGAGCTTTTTAGATTTCGTTTGTTATGACTTCTTTGGGCTGGAGGTTGTTCTTAACCAGATTTTCTGCATTTTAAATTGCAGGTTAGATATCTGT
TGCAGCTATTGTTTAGTTGATTGTTTGCAGAGAAATTACGAGTTGTCTATTGTAAATGTGTTCAACTAGCTTTACAGATCAAAATTTCCCTGAA
>TRINITY_DN36087_c0_g1_i2 from sample A7 / Example unspliced isoform:CAAGTTTTTTCCCCTGCCGTCACTTTTCATATTTAGGACACCCTGTCATTCCAACTCTCACTGTCTTTATTTTTCCATGTTTATTACCATGAAATTAAGCAAACTCTTAAGATGTCCTCCGACTTTTCACTCTCATTATTATAACCACTGTCGTTGGGGGGTGGGTACACAACGGGAGCCCATCACATTTCTGGGTATCT
TGACACAAATGATATGAGATGGGTTTTGCACCATCTGCATCTGGGCATAGAAATCCTTGGAAACTATGAAGAAAATATCTGGCATCCCATTTACCTATAGAAATCCTTGGAACCTATGAAGAATATATCTGGCATCCCATTTACCCATAGAAATCCTTgtaagatatgaagaatatacctggcatcccatttatccattg
agacatttatgctggaaaatagatctgggcattcagggggaaaccccatgaaagctccatctgaatttctttcattggtgcagtgaccaattaaggtttttttctcagttgggcatccttttgcttggatccacagGGCCATCGCACGTCTCTTCATCCCACGTTGTTTCGGCCAAAGTTATTCTATGCACCGGTGCATG
ATTTCAAATTTAAGGCAGGACTGGTGGTGAAGATCCCTTCTGCTGTAAGGGCCTTCTCGAGAAGTTGCAGAGACAGAAGACGAAGGCATGAAGTCGATAAATTCTGCAGAGCCCTTTGGACAGAAACTGATAAAGGTTATTAGCGATGTATGTTTTACATTCTTTGTGCTTGCTGTACTGGTAGTCACAGTGATCGCAAT
AACCTATCAACCGCCAGATCCTTGGCTCGAATCATCAAAAGCAATGTCCAAGGTTTTCTCTTCTGTAGAGAATGCCACATTTAAACAGGATGACTCCATACTCCGCACCGGCGAGGATATTGTTGCTGTTACACCATCCCCAGCTGTTAAAGAGGAGCAACCTGTTACATTGAAAACAGTTGAATTAGAAGAAAAAAATG
TTACTAGTCAGGCACCCACAGCTGATTGTGACCCAAACCAGGCAATAAACTGCTCAGATCCTAAAGTTTTAGTTTTAATCAAGAAGTTTAATTTGAAGGTTTTCAAAAGCATTAATATCTTTGAGTACCAATTGTCTGTTCAAGGGTCCAAACCAAATGAATGTGATGTAGCATGGAGGTTCAGATCTAAGAAGGAAAAG
TCATGGAGGAAGTATAGGGATTTCAGAAGATTCAGTCTGGATTTTGATCTAAATTGCAATTATAAGGTGACAGGCGCTGGCCGGTGGCACTCAGGAAAGAATGCCCGGCCAGTGAAGATGAGAAAAAACACAAGCAACTTCAGCGACCCTAATCATCACATCGCCTCTCCTCCTTTTCTGGTTATAGATGAAAACATAAA
TGACACAGTCCCTATGCCTACATCTGAATCTAGTTTCAGGAAGGGAAAATACTTATATTATTCCCATGGAGGAGACTACTGCAAGGGGATGAACCAATACTTGTGGAGTTTTCTCTGTGCACTTGGAGAGGCACAATACCTCAATAGAACATTTGTCATGGATCTTAGTATGTGCCTTTCTTCAAAGTACACTCCCAGCA
ACAAGGATGAGGAGGGGAAGGACTTTCGGTACTACTATGACTTTGAGCATTTGAAGGAGAGCACCTCTATCATTGAGGAGGGTCAATTTCTGCAAGAAGTGAAGAAATGGAACAAGGAACATAAAAAGGATCAAATCCCTGTCAGGAAAGTAACTGACTACAAGGTCAGTCCCATGCGATTGAAAAGAGACAAAAGTACA
ATCATTTGGAGGGAATTTGATCAACCGGAGCCTGACAATTATTGGTATCGTGTCTGTGAAGGGCCAGCGGAGAAGTATGTTCAGAGGCCCTGGCATCTGCTGTGGAAATCTAAACGGTTGATGAACATTGTCTCAGCAATCAGTGGAAGCCTTGACTGGGATTATGATGCAGTCCATGTTGTTAGAGGTGAGAAAGCTGA
GAACAAGGAACTTTGGCCCAATCTAGACAGAGATACCTCACCCGATGTAATTTTGAGCAAGCTCACCAATCTAATTCACTATCAGAGGAAATTGTATATTGCTACTAATGAGCCAGATTATAACTATTTTGACAAGTTGAGATCCCAATTCAAGGTCTCTCTCCTGGATGATTATAAAGATTTATGGGCAAAGAATAGTG
AATGGTACAATGAGACTACTCTCCTCAACAAAGGCCAGCCTGTGGATTTTGATGGTTACATGAGAGTGGAAGTAGACACAGAAGTTTTCTTTAGGGCAAAGACTCGCGTGGAGACTTTTAATAACTTGACCAATGATTGCAAGGATGGAATCAATACATGTTAACCTTGATACCAACAGGGATGAAGAGTGGCCGAGGAG
CCAAAGGCACAGCAGATAAATATGACTAATTTCTGAAGTCTGGTCTATCAGTCTTGGCTATTTTCTCTTATCAAGGTTAAATTGTACCACTGGCAAATTTTATTTCTGTTCCCTTCATCAATTTGATTTTCAGTTCTACAATGTATCGAAATCTCATTCAATTATCCAGTTGGAAGCATTATTGCCAAGCTTATCTGTAG
AGGTTTTCAGAGTTCGTCATTGATATAATTACCATTCTGCCCAGAGGGATATATATTGCGATAAGAAATTGGTTCCTGACTCCTGAGCTTTTTAGATTTCGTTTGTTATGACTTCTTTGGGCTGGAGGTTGTTCTTAACCAGATTTTCTGCATTTTAAATTGCAGGTTAGATATCTGTTGCAGCTATTGTTTAGTTGATT
GTTTGCAGAGAAATTACGAGTTGTCTATTGTAAATGTGTTCAACTAGCTTTACAGATCAAAATTTCCCTGAA