NA ----> NA
Intron 1 GTTTTCAACC ... AATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.67 | 4 | 2 | 5 |
| A2 | 71.43 | 1 | 1 | 4 |
| A3 | 80.95 | 2 | 4 | 13 |
| A4 | 100 | 0 | 0 | 2 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 63.64 | 2 | 1 | 6 |
| A7 | 65.71 | 6 | 5 | 18 |
| A8 | 88.24 | 1 | 4 | 11 |
| A9 | 82.35 | 3 | 12 | 16 |
| A10 | 53.85 | 6 | 2 | 12 |
>TRINITY_DN44454_c2_g3_i1 from sample A8 / Example spliced isoformGCCAGCTCAAGACGGTTTTTACCGTAGTGAGACACGTTGCGAAGGGTATTGCCATGATGTGAGGTTATCGAAAATATTCGCCAAAGAACAATCGTTGCAAACTAAAAGCTCTCACGAATTGTCAACCTGTCACCGCGTGTTAAAAGCTCTAACGAATTGTCAACCTGTCACTGCGTGTTCTTGAAATTGTTAACTTGAAG
TTTCAAAGTGTTCGCTCATGTTGATGATGACGTAGTCAATTTCTAGAAGATCACTGCAGTAATTTCTTGGGGCAGTTTCCCAGTTCGATCAAAAGGGAAGATTCCTTATCTTCGTATTTCACCATTTGAAATATTTCTTTCATTTTACTTTCATTCGTTCTCTCTAGTTGAGGTTCGTTGTGTATATTTTGATATGCAGG
TTTGACAGATGAAGATAAAAAAAAATCGATTAATTGACGAAAGGGAGAAAATGAATTTTACTGGATCGCCAAGGATATGAAGCCTACAGGAAAACAACCATGGAACGAAAATCAAAGTTAAATGAACTAACCTCAGCCAGTGGACAGGTCACCTTCATCGGTTTTGAATAAGAGGATTTAATGATACCCAGGCTTCTCGA
AAGTTTTCGTTGAAGATTCTTCCAGCTATCATCGGATTGATCGACACTTTTCCATGTTCATTAGATGAAAGCGATGAAGTTGTCGAGCAGTCATTTCTCGGAAGAATTAAGTGCCACCTCTGTTGAGGAGGCGGTTAGAGTTTTATTTACCTATATAACTTGCAATCAATCGATTGAGAAGAGAGGGGAGGAACACTCCA
TGAAATTGGACTGACTTATCTTTTTCATTTTTCTGTATGATGTTTCTCTGCTTGGGTAGAGGTGTCAGCAGAGGATAGAGGATGTTGTTATCCTCTACTTTGTTCTTGTTTGTAAATTTTTATATTTGCGAAGAAGAGGGGGTGCTGCTGCTAGAAAGGATTTCTGGATATGTAATTAAATCTATATAGTTTCTTATCAG
AATTATATTGTAATCAGAAATTCTTCTT
>TRINITY_DN44454_c2_g3_i3 from sample A8 / Example unspliced isoform:GCCAGCTCAAGACGGTTTTTACCGTAGTGAGACACGTTGCGAAGGGTATTGCCATGATGTGAGGTTATCGAAAATATTCGCCAAAGAACAATCGTTGCAAACTAAAAGCTCTCACGAATTGTCAACCTGTCACCGCGTGTTAAAAGCTCTAACGAATTGTCAACCTGTCACTGCGTGTTCTTGAAATTGTTAACTTGAAG
TTTCAAAGgttttcaaccatggcgatgtcttcgagtttttacctacaaggaatttgtagcgaattatggctaaacaatttaaaatatttcagTGTTCGCTCATGTTGATGATGACGTAGTCAATTTCTAGAAGATCACTGCAGTAATTTCTTGGGGCAGTTTCCCAGTTCGATCAAAAGGGAAGATTCCTTATCTTCGTA
TTTCACCATTTGAAATATTTCTTTCATTTTACTTTCATTCGTTCTCTCTAGTTGAGGTTCGTTGTGTATATTTTGATATGCAGGTTTGACAGATGAAGATAAAAAAAAATCGATTAATTGACGAAAGGGAGAAAATGAATTTTACTGGATCGCCAAGGATATGAAGCCTACAGGAAAACAACCATGGAACGAAAATCAAA
GTTAAATGAACTAACCTCAGCCAGTGGACAGGTCACCTTCATCGGTTTTGAATAAGAGGATTTAATGATACCCAGGCTTCTCGAAAGTTTTCGTTGAAGATTCTTCCAGCTATCATCGGATTGATCGACACTTTTCCATGTTCATTAGATGAAAGCGATGAAGTTGTCGAGCAGTCATTTCTCGGAAGAATTAAGTGCCA
CCTCTGTTGAGGAGGCGGTTAGAGTTTTATTTACCTATATAACTTGCAATCAATCGATTGAGAAGAGAGGGGAGGAACACTCCATGAAATTGGACTGACTTATCTTTTTCATTTTTCTGTATGATGTTTCTCTGCTTGGGTAGAGGTGTCAGCAGAGGATAGAGGATGTTGTTATCCTCTACTTTGTTCTTGTTTGTAAA
TTTTTATATTTGCGAAGAAGAGGGGGTGCTGCTGCTAGAAAGGATTTCTGGATATGTAATTAAATCTATATAGTTTCTTATCAGAATTATATTGTAATCAGAAATTCTTCTT