sp|Q9CAV7|STKLJ_ARATH ----> Probable transcription factor At3g04930
Intron 1 GTATATAGAT ... GCAGAAAGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.12 | 19 | 16 | 14 |
| A2 | 38.68 | 10.4 | 8 | 5 |
| A3 | 40.57 | 17.6 | 16 | 8 |
| A4 | 44.44 | 5 | 5 | 3 |
| A5 | 42.43 | 6.8 | 5 | 5 |
| A6 | 46.02 | 67 | 65 | 49 |
| A7 | 43.49 | 67.2 | 62 | 41 |
| A8 | 46.76 | 83.8 | 89 | 58 |
| A9 | 45.92 | 61 | 55 | 48 |
| A10 | 46.14 | 55.2 | 46 | 48 |
>TRINITY_DN45520_c0_g1_i1 from sample A8 / Example spliced isoformCCTTATCAAAACCCTACTTCAGACAGGGGTTTTGCATTCGTATTAAGTCTTGGTAATTCCTCACACGGATTCACAGTGTCTTTTGAGCTGTGGTGAGTTGAGTATAGCGATTTCGATTTTCTGAAGCCATGGTATTTTTTTCAAATGGCCAGAACGAATCCAATTCCTTGAGCGATGGCAGTGGCAACGACTCTGACTCA
GACTCAGACGAGAAGAGATTCTACTCGAAAACCAACAATTCCCAGCGACAGCAATCCTCCTCGACTTCTGCTTCCTCGGTCGACTCCGAGCCTGAGCAGGTGAGCAAGCGCCCGGTGGCGGAAAAGCCCGTTGCCCTGCCTTCGCCTAAGAAGAAACCCAACGCTGGGGACAGTTCCCCTGTTCAAAATCAGGGGACCCT
TTTGGAGCCGAACCTCAAGACCCCCTCTGCCTTGAAGCCCAAGAAGACGGCTTCCACGAAAAGAGGCAAAGACGATGACGATGACGATGCTGAAGAGCAGCCCGAGCAGAAGAAGAAGTCGGCGTCCAAGGGAAAGAAACTCGCTGAAGAAGAAGTCGCCAACGATGATGACGCTGCTGAAGAGCAGACCGAGCTGAAGA
AGTCGGTATCGAAGGGAAAAATACCTGCTGAAGCAGTCCCGGCTTCGAATTCTATGAAGAAGAAACCTCGGAAGCAGCCGCAAGAATCTGCGATCGCCGTCGCCGTGGCGACGCCTACCGCGAAGGATTCGCCTCAGAAATCCTCGAAGAAGACGGCACAGGCATGGACGGATAACGACGAGAGTGTCATCATGCATGGG
TACCTGGTTTGTGTGAAGGAGGGTTTGGAGTTTCCCAAGAACATTCCGCAGCTTATTGAAAAGATTAATGATTTGTTGACCCACGAGGCCAATAAGTCCCTGCTGTATGAAAAGCTCAGGAGGATGAAGGTGAGGTATGAGTCCATTAAGAATAAGATTACTCAGGGGAATATTAAAGAAGAAATTTTCGCTTACAAGAG
CCCTCATGAAAAGGAAATGTATAAGCTCTGGAAACGTGCATGGGGCGAGCATACTGAGGGGGATGAGATGGAGATTGAGCCCGCAGAAGATGCAATGGAGGTAGATCGCACCGAGGTAGGGGAAGAACAGACTATTGCTGGAGACCTCGGGGAGGAAGACGAAGAAGAGGAGGAAGAAGTCGAGAGCGATGCAGACACTG
CCACTATTAAGGATCCCAAGATCCCCACAACACCCAACACTGATAAGGTCCCGGTTTCGAATCACACCCCTGCCAAGTTCCCGGTTTCGAATCACACCCCTGCCAAGTTCCCGGTTTCGAATCGCATCCTTTCCAAGGCCCAAGTTTTGTCGACCCCAATGCCGAATGACAAACCTGAAGGCATGACTGACTACCAAACA
ATTATGAAGGAAACCAGGGATATTCTTTCTGAGGTCAGAACAGATGTGAAGAAAATGACAGAAAATTCTGTGGCCGAAGTGAAGGCATTTCTGGACCGTCAATTGAGTTCGGCAAACGGAACTCGTGGTACGGGAGGAGGAAGCGGGAGAAGAGTTAATTCGGCGGTGTGGTTGAGGAATAGGGAACCTGGTCTCGACGG
GATTTATTCTCTTCGGGAGCTTCCCCACTTGGGTGAGGCTAGATTGCAAATGCTGGAGGGGAAATGGCGAGAGGTGCAAATTCAAGAGATGAAGGCTAGTTCGAAACGGTTGACATTGTTAAAGGAGGAATGCTCCATGTATCTCGAAGAGCTGAGGGAAACAGGAGGCAATGCCAGGTCCTAGTATTCATGTCTGTTAC
CTCTTAAATTTTGGCTGTAATAGAATCACTATAATGATGTATTGGATATAGATTTTTGTTTTTACAATTTGAAGGCAGAAAGAGGTATATAGATTTTTGTATTTACATTTTGGAGGCAGAAAGAGGTATTGCTAAATACTAGTATTCACATATTTTGCCTCTTAAATTTTGGCAGTAATAGAATCATTATAATGATATAT
AGCATTTAGATTTTTGACAGTAATAGAATCATTATAATGATGTATAGCATTTAGATTTTTGGCTTAGAATCGGCAAAATATCATTTTAGTGCTTACGTATACAACAGCGTATGTTACTATTCGGATGTGCTTTTTATCTGTGTGTAAGTTCTCGGCTGGTCTATCAATTTTGGTTTGCATAAATACAACTTCAACTCGAG
AGCGTGTATATACAAGACAATCGAAATTTGATTCAATGGTATCTGAGGTATGCCATCAAAGCTTTTTTGGTGTTGAGCTTTTTGATAATCTAAAGAGTTCTGAGCTATGTGCAGTGTTGGAGGTGTTTTTGTTTGGGAATGTGCTGTACTGCAAGTTGTATAGGTTTTGCATGAAGGATTTGTAATTTGGAGTAGAAATG
GTTTAGGGCTTCTTAATAGGTATTAATTTGTGTGAGCATGGAATGTAAAATTGAGCTCTGGCATCATATTTGCATTATGGCAGCAGTGCAGCTATATAGTATCTCTTGCACCACATGATGAATATTCAAGACCCCACATGATGAATATTCGAGAAGAATGTCAGGAGAATTATATTAATTTTTCCCCTTTTCAAGTCTCT
>TRINITY_DN45520_c0_g1_i2 from sample A8 / Example unspliced isoform:CCTTATCAAAACCCTACTTCAGACAGGGGTTTTGCATTCGTATTAAGTCTTGGTAATTCCTCACACGGATTCACAGTGTCTTTTGAGCTGTGGTGAGTTGAGTATAGCGATTTCGATTTTCTGAAGCCATGGTATTTTTTTCAAATGGCCAGAACGAATCCAATTCCTTGAGCGATGGCAGTGGCAACGACTCTGACTCA
GACTCAGACGAGAAGAGATTCTACTCGAAAACCAACAATTCCCAGCGACAGCAATCCTCCTCGACTTCTGCTTCCTCGGTCGACTCCGAGCCTGAGCAGGTGAGCAAGCGCCCGGTGGCGGAAAAGCCCGTTGCCCTGCCTTCGCCTAAGAAGAAACCCAACGCTGGGGACAGTTCCCCTGTTCAAAATCAGGGGACCCT
TTTGGAGCCGAACCTCAAGACCCCCTCTGCCTTGAAGCCCAAGAAGACGGCTTCCACGAAAAGAGGCAAAGACGATGACGATGACGATGCTGAAGAGCAGCCCGAGCAGAAGAAGAAGTCGGCGTCCAAGGGAAAGAAACTCGCTGAAGAAGAAGTCGCCAACGATGATGACGCTGCTGAAGAGCAGACCGAGCTGAAGA
AGTCGGTATCGAAGGGAAAAATACCTGCTGAAGCAGTCCCGGCTTCGAATTCTATGAAGAAGAAACCTCGGAAGCAGCCGCAAGAATCTGCGATCGCCGTCGCCGTGGCGACGCCTACCGCGAAGGATTCGCCTCAGAAATCCTCGAAGAAGACGGCACAGGCATGGACGGATAACGACGAGAGTGTCATCATGCATGGG
TACCTGGTTTGTGTGAAGGAGGGTTTGGAGTTTCCCAAGAACATTCCGCAGCTTATTGAAAAGATTAATGATTTGTTGACCCACGAGGCCAATAAGTCCCTGCTGTATGAAAAGCTCAGGAGGATGAAGGTGAGGTATGAGTCCATTAAGAATAAGATTACTCAGGGGAATATTAAAGAAGAAATTTTCGCTTACAAGAG
CCCTCATGAAAAGGAAATGTATAAGCTCTGGAAACGTGCATGGGGCGAGCATACTGAGGGGGATGAGATGGAGATTGAGCCCGCAGAAGATGCAATGGAGGTAGATCGCACCGAGGTAGGGGAAGAACAGACTATTGCTGGAGACCTCGGGGAGGAAGACGAAGAAGAGGAGGAAGAAGTCGAGAGCGATGCAGACACTG
CCACTATTAAGGATCCCAAGATCCCCACAACACCCAACACTGATAAGGTCCCGGTTTCGAATCACACCCCTGCCAAGTTCCCGGTTTCGAATCACACCCCTGCCAAGTTCCCGGTTTCGAATCGCATCCTTTCCAAGGCCCAAGTTTTGTCGACCCCAATGCCGAATGACAAACCTGAAGGCATGACTGACTACCAAACA
ATTATGAAGGAAACCAGGGATATTCTTTCTGAGGTCAGAACAGATGTGAAGAAAATGACAGAAAATTCTGTGGCCGAAGTGAAGGCATTTCTGGACCGTCAATTGAGTTCGGCAAACGGAACTCGTGGTACGGGAGGAGGAAGCGGGAGAAGAGTTAATTCGGCGGTGTGGTTGAGGAATAGGGAACCTGGTCTCGACGG
GATTTATTCTCTTCGGGAGCTTCCCCACTTGGGTGAGGCTAGATTGCAAATGCTGGAGGGGAAATGGCGAGAGGTGCAAATTCAAGAGATGAAGGCTAGTTCGAAACGGTTGACATTGTTAAAGGAGGAATGCTCCATGTATCTCGAAGAGCTGAGGGAAACAGGAGGCAATGCCAGGTCCTAGTATTCATGTCTGTTAC
CTCTTAAATTTTGGCTGTAATAGAATCACTATAATGATGTATTGGATATAGATTTTTGTTTTTACAATTTGAAGGCAGAAAGAGgtatatagatttttgtatttacattttgaaggcagaaagagGTATATAGATTTTTGTATTTACATTTTGGAGGCAGAAAGAGGTATTGCTAAATCCTAGTATTCACATATTTTACC
TCTTAAATTTTGGCAGTAGTAGAATCATTATAATGATATATAGCATTTAGATTTTTGACAGTAATAGAATCATTATAATGATGTATAGCATTTAGATTTTTGGCTTAGAATCGGCAAAATATCATTTTAGTGCTTACGTATACAACAGCGTATGTTACTATTCGGATGTGCTTTTTATCTGTGTGTAAGTTCTCGGCTGG
TCTATCAATTTTGGTTTGCATAAATACAACTTCAACTCGAGAGCGTGTATATACAAGACAATCGAAATTTGATTCAATGGTATCTGAGGTATGCCATCAAAGCTTTTTTGGTGTTGAGCTTTTTGATAATCTAAAGAGTTCTGAGCTATGTGCAGTGTTGGAGGTGTTTTTGTTTGGGAATGTGCTGTACTGCAAGTTGT
ATAGGTTTTGCATGAAGGATTTGTAATTTGGAGTAGAAATGGTTTAGGGCTTCTTAATAGGTATTAATTTGTGTGAGCATGGAATGTAAAATTGAGCTCTGGCATCATATTTGCATTATGGCAGCAGTGCAGCTATATAGTATCTCTTGCACCACATGATGAATATTCAAGACCCCACATGATGAATATTCGAGAAGAAT
GTCAGGAGAATTATATTAATTTTTCCCCTTTTCAAGTCTCT