sp|B9EXM2|CARB_ORYSJ ----> Carbamoyl-phosphate synthase large chain, chloroplastic

Intron 1 GTGGTATTGT ... GCCATAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	53.57	13	8	22
A2	42.11	11	5	11
A3	54.76	19	20	26
A4	38.89	11	5	9
A5	52.38	5	3	8
A6	70.82	34	75	90
A7	59.72	57	66	103
A8	58.11	62	65	107
A9	64.57	62	88	138
A10	67.31	34	55	85

>TRINITY_DN103809_c0_g2_i2 from sample A4 / Example spliced isoform

TGACATGTGATGAAAGCATTACAAAATCACTAGATCCAGTTGCTGCAGCTACCAACCGCTTTGAACATTGTGTATCAATCTCACAAATGAGAAGCTGCAGCAATACTTCAATCAGGAAGGGTTGGATATCTTGCTCTTGTGAGACCCTATTATCTTTTAGGTGGTCCTGCAATGGAAATTGTATGCAATGATGACAAATT
GAAGCAATACTCTGCAGTAGAAGTGGACCTTGAAAGGCCAATACTTGTTGATAAATATCTAGAAGATGCTTGTGAGATTGATGTAGATTCTTTGGCAGATTCTAATGGTAGTGTAGTCATTGGTGGTATCATGGAGCACAATGAACAATCAGGTGTACATTCTGGTAATTCGGCTTGCTCTATTCTGACAAAAGCAATAT
ATCTTGCATGCTTGTTAATAATTAGATCCTGGACATTTAAATTGGCAAAGCAGTTTGGATTTTGTGGAATGATGAATTGCCAACATGCAATCACCCTTGTTGGTGAAGTTTACCTTCTTGAAGCAAATCCCAGGGCATCATGAAAAATACCTTTATGTCAATTGGTCATCCTTTAGCAAAGTTTGTTTCCCTTCTTATGC
AAGGAAAATCTAATCTCATCGAGACATTAGTTTTACAAAGGAAGATATTGCAAGTCATGTAGCTGGCAGGGAAGCAGTCCTTCCATTATCCTTACATGGTGCAGAACAGTAGTATCTTTGCCTCC

>TRINITY_DN103809_c0_g2_i1 from sample A4 / Example unspliced isoform:

TGACATGTGATGAAAGCATTACAAAATCACTAGATCCAGTTGCTGCAGCTACCAACCGCTTTGAACATTGTGTATCAATCTCACAAATGAGAAGCTGCAGCAATACTTCAATCAGgtggtattgttaaaagtgatgatgatgcattggccatagcagGAAGGGTTGGATATCTTGCTCTTGTGAGACCCTATTATCTTTT
AGGTGGTCCTGCAATGGAAATTGTATGCAATGATGACAAATTGAAGCAATACTCTGCAGTAGAAGTGGACCTTGAAAGGCCAATACTTGTTGATAAATATCTAGAAGATGCTTGTGAGATTGATGTAGATTCTTTGGCAGATTCTAATGGTAGTGTAGTCATTGGTGGTATCATGGAGCACAATGAACAATCAGGTGTAC
ATTCTGGTAATTCGGCTTGCTCTATTCTGACAAAAGCAATATATCTTGCATGCTTGTTAATAATTAGATCCTGGACATTTAAATTGGCAAAGCAGTTTGGATTTTGTGGAATGATGAATTGCCAACATGCAATCACCCTTGTTGGTGAAGTTTACCTTCTTGAAGCAAATCCCAGGGCATCATGAAAAATACCTTTATGT
CAATTGGTCATCCTTTAGCAAAGTTTGTTTCCCTTCTTATGCAAGGAAAATCTAATCTCATCGAGACATTAGTTTTACAAAGGAAGATATTGCAAGTCATGTAGCTGGCAGGGAAGCAGTCCTTCCATTATCCTTACATGGTGCAGAACAGTAGTATCTTTGCCTCC