NA ----> NA
Intron 1 GCAAACCGAA ... AGGATGAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.94 | 86 | 157 | 148 |
| A2 | 59.44 | 102 | 159 | 140 |
| A3 | 60.71 | 77 | 127 | 111 |
| A4 | 47.83 | 18 | 21 | 12 |
| A5 | 69.88 | 25 | 63 | 53 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 50 | 2 | 2 | 2 |
| A8 | 100 | 0 | 6 | 4 |
| A9 | 42.86 | 6 | 3 | 6 |
| A10 | -1 | 0 | 0 | 0 |
>TRINITY_DN115978_c1_g3_i8 from sample A2 / Example spliced isoformGACAGCTATAGTCAGAAACAAATGCCACCGCAAAAATAGAGAAGCTGTGAGACAGTCACAAAATACAACTCAGAGTCAAATGCTACAGCAGAAATGGAAAAGCTTGTGCGAGAAGACCATGAAGATGAAGCCGTGAAGAGAGATCCGTAAGGATAAACCCGTGAGAGAAACCTGTGAAGAAAACCCCCGAGGGCAAAGCC
GTGAAGGAAAACCGTGAGGGTAAGGCCGTGAAGACAAACCAAAAAACAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAGCCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAACCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAATCGTGAAGCTGTGAAGGCA
AACCGAAATATCAAATGCCAGATCCGTGAGGATGAAGCCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAACCGTGAAGGCAAACACCTGTGACAGGAATAGAGCGGTGAAGGAGCAACCGTGAAAACAAACACCTGTGACAGAGATACAGCGGTGAAGGAGAAACCGTGAAGACAAACACCCGTG
ACAGAGTTACAGCGGTGAAGGAGAAACCGTGAAGACAAACACCCGTGACAGAGTTACAGCAGTGAAGGAGAAACCGGGTGAAGGAGAAAGACAGTCGTGTAATCCAAATCAGGAGCAGACCCGAAAATAATACCCGAGAGAAAACAACGATCAGTGAAGTGTATGCTCACCGTATATTATTAGAACATAAGCAATGTAAG
GTTTATATATATTGAAAATTAACAACCTTACGTTAAAATAGGAATAAAATTAAATTAAATAAAATAATAAGAAAAGAAAAGTCAAGGGATAAAGTACCAAAGGTCCAAATTAATAAAAGGATAAAACTTAAATAATCCAATAAATAATAATAAAATAATAAAACGTTATT
>TRINITY_DN115978_c1_g3_i3 from sample A2 / Example unspliced isoform:GACAGCTATAGTCAGAAACAAATGCCACCGCAAAAATAGAGAAGCTGTGAGACAGTCACAAACTACAGCTCAGAGTCAAATGCTACAGCAGAAATGGAAAAGCTTGTGCGAGAAGACCATGAAGATGAAGCCGTGAAGAGAGATCCGTAAGGATAAACCCGTGAGAGAAACCTGTGAAGAAAACCCCCGAGGGCAAAGCC
GTGAAGGAAAACCGTGAGGGTAAGGCCGTGAAGACAAACCAAAAAACAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAGCCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAACCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAATCGTGAAGgcaaaccgaaa
ggcaaaccgaaatatcaaatgccagatccgtgaggatgaaagCTGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAGCCGTGAAGGCAAACCGAAATATCAAATGCCAGATCCGTGAGGATGAAACCGTGAAGGCAAACACCTGTGACAGGAATAGAGCGGTGAAGGAGCAACCGTGAAAACAAACA
CCTGTGACAGAGATACAGCGGTGAAGGAGAAACCGTGAAGACAAACACCCGTGACAGAGTTACAGCGGTGAAGGAGAAACCGTGAAGACAAACACCCGTGACAGAGTTACAGCAGTGAAGGAGAAACCGGGTGAAGGAGAAAGACAGTCGTGTAATCCAAATCAGGAGCAGACCCGAAAATAATACCCGAGAGAAAACAA
CGATCAGTGAAGTGTATGCTCACCGTATATTATTAGAACATAAGCAATGTAAGGTTTATATATATTGAAAATTAACAACCTTACGTTAAAATAGGAATAAAATTAAATTAAATAAAATAATAAGAAAAGAAAAGTCAAGGGATAAAGTACCAAAGGTCCAAATTAATAAAAGGATAAAACTTAAATAATCCAATAAATAA
TAATAAAATAATAAAACGTTATTTCGCTGAATGCTGAGATAAGTCGTGACACAACCCAAAACAACAAATGCTGAGATAGAACGTGAGACAGTCTAATCGTGAAGGCAG