NA ----> NA

Intron 1 GTACCCATAT ... TGTTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	26.32	42	6	15
A2	20.69	46	3	12
A3	33.33	50	7	25
A4	29.03	22	5	9
A5	28.57	30	6	12
A6	25.98	208	11	73
A7	23.51	244	8	75
A8	32.87	192	25	94
A9	25.31	183	4	62
A10	26.53	144	4	52

>TRINITY_DN117251_c6_g3_i1 from sample A3 / Example spliced isoform

CCTTCTTTGTTGGGTCAGCAGCAATGCTTTTGCTCAGAGTTTGGGTTTCGCCTTAGCATGGAAGGTGGTTCTTGCTTCTGAATTGATATTTTTGGCACCTGGAATCATAGGACACAAAGTATTTGAGGAGCGAGCACCTGTGGTTTTGGATAATCTTATTGAAGTTTTCATGATGGAACAATTTTTTGTCTTCCTTGAGG
TCCTCCAAAAGTTCTTTGGTTACGAACCTTACCCTGGTTTCCAGAAGGCTGTTCAAGCAAGAGTGCAAGCAAATATCAAGGAATGG

>TRINITY_DN117251_c6_g3_i2 from sample A3 / Example unspliced isoform:

CTGATACCAATGATCAAGCTTCAGGGGTGATTGAGCCCCTGAAGGAAGAGAGAAAACTCTTTATCTTAGAAGATCATAGTCCTATGCAAAAGTGTGAGATTTGCAGAAGTGACTAAAAGTGTGTAGGCAAGGAATACAGCTTATTGTGGTAATATAATGAACGAGAGAATTGTTACAGAGTAGCGCATCTGTTGTGTGTG
CAATGAAATAACACTGTATAGTGCAGTAAACTCAGTAAACAACTCAATTAGATAATTTTGCACAGCATAAACAGTAAACCAGAGGATAATGCAGAGATATTGAGTAAGTTAAGTATGAGAGGGTAAACTAGAGAGAATCATGAACATCCCACAGTGAGCATCCCCTAGTGACAAGATGTAGCTCCAATTTGTACAGTACT
ATTATCAGTACAAAGGAGTACAAATTGAGCAGCGACTGAGTTGTGAAGTAGCTTTGTGCGCCAGATCATTGCAATGAGTGATGTGAGGCAAGTTATGCTATAGCTAACTGCTAAGAGAATGCTAAGAGTGTACAATGGTGATATGATACATATTTATACAATTCAAATGATCATTGATCGATGCTGTAATGGAGTGATCA
AAGGTGGATTCTAATGGTTCGCCTTGTGCATTGTATGTGAGGTTGAGTAGAGCCTCTTTCCTTGTTTTCAGGTCTGATATAGCAGGCACTGCCTGACTTCAAGTTGATCAATGGCTTTTGCATTAGTCTGCTGTTGAGATAGTTAGACTTGGTCACCAATTGTGACATCTGCGCGGGACTACTAGGCTGTGTGCTGGCAC
TGACTAGCCAAGTTGGGACGTTGTAATGGTTGCACAGGGATTCTGGCACAGGACTTTGGTCGTTGGCATAAAAAATGTCTGGTGCAAGAGCAGAAGCTTGGGCACTTTCACTGATCTTGCCTGGGCTCTGGCACAGGACTGACATAGTTGAGCTGGAGAATGGATCATATTTATTTCTGAATGATTGACTATTGCTTTGT
TTTTCTCAGGTGGTTCTTGCTTCTGAATTGATATTTTTGGCACCTGGAATCATAGGACACAAAGTATTTGAGgtacccatatgaaactatacaaatttttccatggctgctacatgttgaattggaatctcagtacttgttttgcagGAGCGAGCACCTGTGGTTTTGGATAATCTTATTGAAGTTTTCATGATGGAACA
ATTTTTTGTCTTCCTTGAGGTCCTCCAAAAGTTCTTTGGTTACGAACCTTACCCTGGTTTCCAGAAGGCTGTTCAAGCAAGAGTGCAAGCAAATATCAAGGAATGG