sp|Q9SA18|AKH1_ARATH ----> Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic

Intron 1 GTTTGGTGAT ... CATGAGTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	14.29	27	3	6
A2	22.22	14	4	4
A3	12.5	14	3	1
A4	46.67	4	3	4
A5	30	7	2	4
A6	16.3	77	19	11
A7	15.58	65	14	10
A8	19.76	67	16	17
A9	20.81	59	19	12
A10	19.64	45	11	11

>TRINITY_DN96690_c3_g1_i7 from sample A5 / Example spliced isoform

TGAATTACAAGGAGGACAGCCTTTCAGTGAAGTTGTTCGAGCAGCTAAAATCCTAGGTTACACAGAACCAGATCCACGTGATGACCTTAGTGGAATGGATGTGGCAAGGAAGGCTTTGATCCTAGCTCGAATGCTTGGCTGGCGAATCAACTTGGAGAATGTTGAGGTAGAGAGCCTTTACCCCTCTGAAATGGGACCGG
ATGCTATGGCAGTTGAGGATTTTCTAAATAAAGGCCTTCCAATGCTTGATGAGGCGATGGAAGAGAGGATTAAGATTGCTGCTTCAAGTGGCAATGTTGTTCGTTACGTGTGTACAATTGACAATTTCAGGTGCAAAGTAGGGCTTAAGGAGCTGCCGGCAAATTCTCCAATAGGACAATTGAAAGGAAGCGACAATCTG
GTAGAAGTATATAGTCGATGCTACAAGGCACTACCCCTAGTTATTCAAGGAGCTGGAGCTGGTAATGACACCACAGCTGCAGGAGTTCTAGCTGATATTGTTGATTTACAGGATCTATTTCATTCTCATGACTAGGTTCCTCTATTTTCAAACTTGCAACTCCTTTGCTGTATGAAGAGAC

>TRINITY_DN96690_c3_g1_i4 from sample A5 / Example unspliced isoform:

TGAATTACAAGGAGGACAGCCTTTCAGTGAAGTTGTTCGAGCAGCTAAAATCCTAGGTTACACAGAACCAGATCCACGTGATGACCTTAGTGGAATGGATGTGGCAAGGAAGGCTTTGATCCTAGCTCGAATGCTTGGCTGGCGAATCAACTTGGAGAATGTTGAGgtttggtgatacattataatgttcttttagaatg
ttagagtgagtttattaaacagttagcatgagataaagaaatgtggcatagatacttgattttggatagaacacaaattctaacaaggtctagtctttccatgagtcagGTAGAGAGCCTTTACCCCTCTGAAATGGGACCGGATGCTATGGCAGTTGAGGATTTTCTAAATAAAGGCCTTCCAATGCTTGATGAGGCGA
TGGAAGAGAGGATTAAGATTGCTGCTTCAAGTGGCAATGTTGTTCGTTACGTGTGTACAATTGACAATTTCAGGTGCAAAGTAGGGCTTAAGGAGCTGCCGGCAAATTCTCCAATAGGACAATTGAAAGGAAGCGACAATCTGGTAGAAGTATATAGTCGATGCTACAAGGCACTACCCCTAGTTATTCAAGGAGCTGGA
GCTGGTAATGACACCACAGCTGCAGGAGTTCTAGCTGATATTGTTGATTTACAGGATCTATTTCATTCTCATGACTAGGTTCCTCTATTTTCAAACTTGCAACTCCTTTGCTGTATGAAGAGAC