NA ----> NA
Intron 1 GTAGGTTTTC ... GTCTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 2 | 4 | 0 |
| A2 | 81.82 | 2 | 9 | 0 |
| A3 | 100 | 0 | 4 | 1 |
| A4 | 25 | 3 | 1 | 0.7 |
| A5 | -1 | 0 | 0 | 2 |
| A6 | 71.43 | 14 | 35 | 2.3 |
| A7 | 50 | 9 | 9 | 6 |
| A8 | 80.49 | 8 | 33 | 7.3 |
| A9 | 51.43 | 17 | 18 | 3 |
| A10 | 45.83 | 13 | 11 | 1 |
>TRINITY_DN41829_c0_g1_i2 from sample A6 / Example spliced isoformGGGGATTCTGCTGTCCCTTCAGATGCGCAGCTTATCTTGATTAGTCAGTTGTATGTGGGTGTTATGGGTGTGTACCTGAAAGACGAGCCCAAGTAATCCAATCGTCTGAAGTTCTTCTTCACCGATGGATTCCACAATATCTCGCTCTCTGCCTTCAAAGCCCATCTCAGCCATCAGCAATCAATTTGGGCTTATCCACT
CAAAATCTGCGTTTTCATATTGTGATAAAGTTCGTGTGAAGAAATATTCTTCAAGCACATTCAGCGCCTTCAATCATTGCCCCCCTATTCAGAGAAGTTTCAGGCTTCATCTTCTGAGTGCTGTAACCACAAGGCGGAAACAACCTTTGAGTGTATGCCGAAGTGGCTCTGACGATCTCAATATCAACAAAAATGGAAAT
GGGAGTGAATGGATAACTTCCATTCTTCTGTTCGGACTGTGGGCAGCTCTGCTTTACTACGTATTTGTGCTTTCACCCAATCAGACAGCGAACAGGGATTTCTATTTTTTGAGAAAGCTGCTGAATCTAGAAGGAGATGATGGTTTTCAAATGAACCCAGTCTTGGTGAGCCTTTGGTACATTATGGGATTCTGGCCTTT
AGTCTACAGTATGTTGCTGCTACCAACTGGCCGAAGTTCTAAGAGCAAAGTTCCTGTTTGGCCATTCCTTGTAATGTCATTCTTTGGCGGCGCATATGCTCTGATACCATATTTTATATTATGGCGGCCACCGCCTCCCATTGCAGACAAGGAGGAAACTGAGCGCTGGCCATTAAAATTTCTTGAGTCCAAAATAACTG
CAGTGACATTGATTTTGGGAGGAGTGGTCTTGACCATAAATGCTGGACTGGCAGGAGACGATGCATGGAAGGAGTTTTTTCAGTATTTTAGAGAGAGCAAATTTATACATGCTACTTGTATTGATTTTTTGACACTGTCATCATTGTCTCCTTTTTGGGTCTACAACGATATGACGATTCGAAACTGGTTCAGTAAGGGA
TATTGGTTATTGCCATTGACGTTGGTTCCATATCTTGGACCTACATTATACCTAGCATTACGCCCACCTCTTCCATCTGCCATTGTTATGGATGAGATGAATAGCTGATTGCAGTTCTCAACTAAAGGGAAAGTCTGTCTCAACTCTTCTCATTTTGTCTTGGGCTTAGGCAGGCTAGACAAAATCTTATTATAATTATT
GTCTTGATTCGAAGCTTAGTTTTGGGTGTTGAAAACATCAGACAATAGGAAATCATTGTCTCTTCCATTGTTACATTTATTGGCAATTGGAGTTTGCAAACTGTCTAGTGGTCAAATATTTCTGGTATATGAGGATCTGTAAAATGCAGAGGAGAAAAACAGAGAAACAAATAACAATGTACAGCAAACTGAAAGGACAC
AACAGCAACACCCTCTCTAATTAATGCTCTTATTAAAT
>TRINITY_DN41829_c0_g1_i1 from sample A6 / Example unspliced isoform:GGGGATTCTGCTGTCCCTTCAGATGCGCAGCTTATCTTGATTAGTCAGTTGTATGTGGGTGTTATGGGTGTGTACCTGAAAGACGAGCCCAAGTAATCCAATCGTCTGAAGTTCTTCTTCACCGATGGATTCCACAATATCTCGCTCTCTGCCTTCAAAGCCCATCTCAGCCATCAGCAATCAATTTGGGCTTATCCACT
CAAAATCTGCGTTTTCATATTGTGATAAAGTTCGTGTGAAGAAATATTCTTCAAGCACATTCAGCGCCTTCAATCATTGCCCCCCTATTCAGAGAAGTTTCAGGCTTCATCTTCTGAGTGCTGTAACCACAAGGCGGAAACAACCTTTGAGTGTATGCCGAAGTGGCTCTGACGATCTCAATATCAACAAAAATGGAAAT
GGGAGTGAATGGATAACTTCCATTCTTCTGTTCGGACTGTGGGCAGCTCTGCTTTACTACGTATTTGTGCTTTCACCCAATCAGACAGCGAACAGGGATTTCTATTTTTTGAGAAAGCTGCTGAATCTAGAAGGAGATGATGGTTTTCAAATGAACCCAGTCTTGGTGAGCCTTTGGTACATTATGGGATTCTGGCCTTT
AGTCTACAGTATGTTGCTGCTACCAACTGGCCGAAGTTCTAAGAGCAAAGTTCCTGTTTGGCCATTCCTTGTAATGTCATTCTTTGGCGGCGCATATGCTCTGATACCATATTTTATATTATGGCGGCCACCGCCTCCCATTGCAGACAAGGAGGAAACTGAGCGCTGGCCATTAAAATTTCTTGAGTCCAAAATAACTG
CAGTGACATTGATTTTGGGAGGAGTGGTCTTGACCATAAATGCTGGACTGGCAGGAGACGATGCATGGAAGGAGTTTTTTCAGTATTTTAGAGAGAGCAAATTTgtaggttttcttcctcgcctctatctaatttctcattagtagctattgggtatacatttacaagactgaaggcttagttagacaacgtgaaggcat
tgactaagtttagcatggacagttaatttgaactcaagagagattttacaaacttttgacatgctagctttgcattccaacttagtcacagatataactttgcatcttagtcttctctgttgggatgaatatttattattttcctctgtgcaactggtattcctatgatgtctttttagttggaaatctaatgcatcagg
tttagtttgactataggtcttagcctaaagttttcaattctgaccaaatcagtctgtgcagATACATGCTACTTGTATTGATTTTTTGACACTGTCATCATTGTCTCCTTTTTGGGTCTACAACGATATGACGATTCGAAACTGGTTCAGTAAGGGATATTGGTTATTGCCATTGACGTTGGTTCCATATCTTGGACCTA
CATTATACCTAGCATTACGCCCACCTCTTCCATCTGCCATTGTTATGGATGAGATGAATAGCTGATTGCAGTTCTCAACTAAAGGGAAAGTCTGTCTCAACTCTTCTCATTTTGTCTTGGGCTTAGGCAGGCTAGACAAAATCTTATTATAATTATTGTCTTGATTCGAAGCTTAGTTTTGGGTGTTGAAAACATCAGAC
AATAGGAAATCATTGTCTCTTCCATTGTTACATTTATTGGCAATTGGAGTTTGCAAACTGTCTAGTGGTCAAATATTTCTGGTATATGAGGATCTGTAAAATGCAGAGGAGAAAAACAGAGAAACAAATAACAATGTACAGCAAACTGAAAGGACACAACAGCAACACCCTCTCTAATTAATGCTCTTATTAAAT