sp|Q9LYD9|EMF1_ARATH ----> Protein EMBRYONIC FLOWER 1
Intron 1 GTCTTGATCT ... GCCATTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 77.78 | 1 | 4 | 3 |
| A2 | 100 | 0 | 4 | 2 |
| A3 | 50 | 1 | 1 | 1 |
| A4 | 71.43 | 2 | 6 | 4 |
| A5 | 20 | 2 | 0 | 1 |
| A6 | 77.78 | 1 | 1 | 6 |
| A7 | 45.95 | 10 | 6 | 11 |
| A8 | 71.43 | 2 | 5 | 5 |
| A9 | 40.54 | 11 | 1 | 14 |
| A10 | 76 | 3 | 14 | 5 |
>TRINITY_DN43649_c1_g1_i4 from sample A9 / Example spliced isoformGCGAGAAGATGACACCGGAACCATGGGTTGTGGATGGATACACATATGTGAATGTGTGGGACAAGGGTCGTGGATATATATATATATATTTAAAAGGAGCGTTTTCCCATGGCTCCATTTTCCTTTTCGCGTCTGCCCGCTCATCGACACGGAGAAATGGCGCGGGCTCTGTCCTCTCTACGCTTCTAGTATGCTCTCAT
GTGCTGGATGTTGCCGAAGATTCTTCTGTCCACAGTTCGATCACACACTGAAGACTGCTTTCCGACAATGCGGATCGATCATTCCCTGCAAATGCCTCCCTCCGCCTCTATGTGCTGCTTTGAGCCACTGTCACGGGCTTGAACGCCCTTGTGAAGCCTTGCTTGTACACAGGATGCGTCTGACAACGCCTGATAATGGG
CATAATCTGTCAATCTTTATATATTATGGCTGGACGGGTTAATGACAAGTAAGGTCATTGAGGTACTTTTTAAATAACGGGTTTCATCTACACAGAAAGCAATCGAGGGGGAGCAATACTTATTGTTCCCTAATCATCTATGGGTGGCTTTAAAAATCCTCCAAATGGTTCTCCACCACTTCTGAACCTGCAGAATGTAC
AGATTCATACGGAACCTAATTGCCCAGCAGCTGCGGATGAGAACGCTTTATCTGACAAAGCTGATCATGGTTTCGCGCCCTTCAGAAACCCAGCTACTTTTTTCGAAGACCTCCCTCGGAAAATTGACGGCAGAAGCGTCCTATGCGAAGGTTTCTCCATACGTGAATATGTAGCAAAAGTTAGAAGTGTGGATATAAGG
AAATGCTGGCCATTGTCTGAAAGCCTACTGGAGGACAGTCTAAGAGAAGGGCGAAAGCCCCCGCTTCCGCCTCTGGTGAGGCCTAGTTACAGATGGTGGTCCTGTCATCAGGGCCTGGGAATGTTTGGGGAACATAAGCACTATGAGGTGTTCTTTGACAGGTGCAATTCTCTCAGTATTGAGCTGCCAGAAAATAATTC
CCAAAATTACCATATCATAGAACAAAATCGAACTGTTTCTTTAGATACAGATCCAGAAACTGGTGCGGGGATTTCTCAAGACTTGGATAAACAGATTAGGAAACTAAGCACAGCTAAAATTTCAGGACAGAACTGGTTAAATATTGCTAGAAGCTGCGAAGACGCTATTAAGGATATAGAGGACAAAAGTGAGAGGGTCG
ATAAGGAATTAGTTGAGGAACGTGGCCAGAACATTATTGTGCCTTCATGTATTAGAGAATCAGACAACCAAACGCAGGCAAAGAATTCGACCTTTGATTTAATTGAGAGGGTAGGTGATTTACTGAATGATGTAGGCCGAAACGGCAAGGAAATGGAGAAGGCAATGAGGGTTCCGGACGAGACAGCTGATCAGGCAGGA
ACACAATCAGTCTCACTGGAGTGCGAGGGAAGCAAAATTGATAGCCTGATTTCCGAATTAACCAAAATTGTGTCGCGTAAAGCTAATCATTTTGATGTAGGCAATTCTGAATGTTCTGGGGTCAAAATATGCCCAGTTTGTACAACATTCACTTCAGCGACCATCACCGCTGTGAATGCTCACATAGACAATTGTCTTGC
GCAAGTTTCTAAGACAGAGAAAAAACAAAAATCAAGAGCAAGAAAGAAGCGGTCAATAGTTGATATTTGTGCAGCCTCTCCGCCCGTTCAAATGAGTCTGGAATATCTGGAGAATTTCCATATGGATGACGACACAAATGAGTCAGCCGGTTCACATGGTATGCATTCGAAATCCAAGCTAGCAATAGAGGTCAGGGCAA
ATGGAGCGCTTACAGAGGACATGAACTCAATTCAAACCAGTTCAGAAGCTGCGACTCAGGATGACTCATCAACTGTTAAATGCAAGAGAAAGCAGCCAGCTGAAGCACATTATTCCACTGAATCTGAAAAATCTACGAATGGAGATGGACAACCGGAGTCCCTGGAAACGAAAAGGAGAAGACAACGGCTCGGTATAATA
ACCTGCGTTTTAGGTTCCAAGGATTTGAAGGTATGTCTCATTTCATGCCCATATCATCTCTATTTTATGCTAGTGGTACTTTGGTGAATACTTCTTGATTTGTTCGTCGATTTTGCCATATTTTTGCATGAAATAGTGCAATTCAATACCAAACATTTGGCCATGAAAGTAGCCTTAGCCTTTTCAACTCCGTAACTTTT
ACCAGTGCACTGAAATAAGCATGAAGATCATATCTCAAACGAGTAGCTTTGCTTTCTTGACTATCTTACTGCTTACAGTACATTTAAATACGTATATTTCAGACGAATGTCTGTAGACACAAAATATCATAGCTCGTAAACATCCTAAGGATTTGCTGTTTGGTAACAACTATAACATGTATAGAATCTATATCCATTTT
ACTCATCATGTCTTCACATAGAGCGAGATGAATGCTGGTTTTTTTAATTGTTACATCACGGTAACTAATAAATTGAGGGGTCTTTTGTTTTGTTTTTTCAATTAAGAGTTCAATTTCAAATAAGGGAGACTTCTCCAATGAAGAACATCGTGTAAATTGCTGTCAGTCAACTTTAAAAGTTAGAGATTATAGAGAGAAAC
AAGGACAAAATGCAGATGCTGTGACTAGATAGCTGAGAACTGTTTAACAAGCAACCGGGCTTTTTAACTCTAGCAGTGACTTCAGGACTACAACACATCCATTCGTATTGGCCAAAGCTGAAAGTGGCACTTATTTTCTTTATTAAAGTTAAACTGAAGTGGAAACATCTGTTTCCACATGGAAGAACACTCAGTAGATT
TCTGTCAGTCAACTGTAAAAATTGCCGATATGAACAGAAACGAAGACAAGAATGAACATGCTGTGATTAGATCGCTGAGAACTGTTATGAACAGAATGGTACGAACAAGCATTTGGTTTCGTGGTGAATACAACTCATCCATTCATATTGGCCAAAGTTGGAAGTGCAACTTTTTTATTTGGGG
>TRINITY_DN43649_c1_g1_i2 from sample A9 / Example unspliced isoform:GCGAGAAGATGACACCGGAACCATGGGTTGTGGATGGATACACATATGTGAATGTGTGGGACAAGGGTCGTGGATATATATATATATATTTAAAAGGAGCGTTTTCCCATGGCTCCATTTTCCTTTTCGCGTCTGCCCGCTCATCGACACGGAGAAATGGCGCGGGCTCTGTCCTCTCTACGCTTCTAGTATGCTCTCAT
GTGCTGGATGTTGCCGAAGATTCTTCTGTCCACAGTTCGATCACACACTGAAGACTGCTTTCCGACAATGCGGATCGATCATTCCCTGCAAATGCCTCCCTCCGCCTCTATGTGCTGCTTTGAGCCACTGTCACGGGCTTGAACGCCCTTGTGAAGCCTTGCTTGTACACAGgtcttgatcttgaagggtttccaacatg
aatttatttccattctttttgtttttcgtccacacgacctcaagacaattagggcataactacaataggactacttgaccttccataggcctaaaattcatacgccattttatgttggggatgtacaggtatcttgtaggaggatgtattcttattctttcaaatattgaaattttgagattatcttttgatgccattgt
agGATGCGTCTGACAACGCCTGATAATGGGCATAATCTGTCAATCTTTATATATTATGGCTGGACGGGTTAATGACAAGTAAGGTCATTGAGGTACTTTTTAAATAACGGGTTTCATCTACACAGAAAGCAATCGAGGGGGAGCAATACTTATTGTTCCCTAATCATCTATGGGTGGCTTTAAAAATCCTCCAAATGGTT
CTCCACCACTTCTGAACCTGCAGAATGTACAGATTCATACGGAACCTAATTGCCCAGCAGCTGCGGATGAGAACGCTTTATCTGACAAAGCTGATCATGGTTTCGCGCCCTTCAGAAACCCAGCTACTTTTTTCGAAGACCTCCCTCGGAAAATTGACGGCAGAAGCGTCCTATGCGAAGGTTTCTCCATACGTGAATAT
GTAGCAAAAGTTAGAAGTGTGGATATAAGGAAATGCTGGCCATTGTCTGAAAGCCTACTGGAGGACAGTCTAAGAGAAGGGCGAAAGCCCCCGCTTCCGCCTCTGGTGAGGCCTAGTTACAGATGGTGGTCCTGTCATCAGGGCCTGGGAATGTTTGGGGAACATAAGCACTATGAGGTGTTCTTTGACAGGTGCAATTC
TCTCAGTATTGAGCTGCCAGAAAATAATTCCCAAAATTACCATATCATAGAACAAAATCGAACTGTTTCTTTAGATACAGATCCAGAAACTGGTGCGGGGATTTCTCAAGACTTGGATAAACAGATTAGGAAACTAAGCACAGCTAAAATTTCAGGACAGAACTGGTTAAATATTGCTAGAAGCTGCGAAGACGCTATTA
AGGATATAGAGGACAAAAGTGAGAGGGTCGATAAGGAATTAGTTGAGGAACGTGGCCAGAACATTATTGTGCCTTCATGTATTAGAGAATCAGACAACCAAACGCAGGCAAAGAATTCGACCTTTGATTTAATTGAGAGGGTAGGTGATTTACTGAATGATGTAGGCCGAAACGGCAAGGAAATGGAGAAGGCAATGAGG
GTTCCGGACGAGACAGCTGATCAGGCAGGAACACAATCAGTCTCACTGGAGTGCGAGGGAAGCAAAATTGATAGCCTGATTTCCGAATTAACCAAAATTGTGTCGCGTAAAGCTAATCATTTTGATGTAGGCAATTCTGAATGTTCTGGGGTCAAAATATGCCCAGTTTGTACAACATTCACTTCAGCGACCATCACCGC
TGTGAATGCTCACATAGACAATTGTCTTGCGCAAGTTTCTAAGACAGAGAAAAAACAAAAATCAAGAGCAAGAAAGAAGCGGTCAATAGTTGATATTTGTGCAGCCTCTCCGCCCGTTCAAATGAGTCTGGAATATCTGGAGAATTTCCATATGGATGACGACACAAATGAGTCAGCCGGTTCACATGGTATGCATTCGA
AATCCAAGCTAGCAATAGAGGTCAGGGCAAATGGAGCGCTTACAGAGGACATGAACTCAATTCAAACCAGTTCAGAAGCTGCGACTCAGGATGACTCATCAACTGTTAAATGCAAGAGAAAGCAGCCAGCTGAAGCACATTATTCCACTGAATCTGAAAAATCTACGAATGGAGATGGACAACCGGAGTCCCTGGAAACG
AAAAGGAGAAGACAACGGCTCGGTATAATAACCTGCGTTTTAGGTTCCAAGGATTTGAAGGTATGTCTCATTTCATGCCCATATCATCTCTATTTTATGCTAGTGGTACTTTGGTGAATACTTCTTGATTTGTTCGTCGATTTTGCCATATTTTTGCATGAAATAGTGCAATTCAATACCAAACATTTGGCCATGAAAGT
AGCCTTAGCCTTTTCAACTCCGTAACTTTTACCAGTGCACTGAAATAAGCATGAAGATCATATCTCAAACGAGTAGCTTTGCTTTCTTGACTATCTTACTGCTTACAGTACATTTAAATACGTATATTTCAGACGAATGTCTGTAGACACAAAATATCATAGCTCGTAAACATCCTAAGGATTTGCTGTTTGGTAACAAC
TATAACATGTATAGAATCTATATCCATTTTACTCATCATGTCTTCACATAGAGCGAGATGAATGCTGGTTTTTTTAATTGTTACATCACGGTAACTAATAAATTGAGGGGTCTTTTGTTTTGTTTTTTCAATTAAGAGTTCAATTTCAAATAAGGGAGACTTCTCCAATGAAGAACATCGTGTAAATTGCTGTCAGTCAA
CTTTAAAAGTTAGAGATTATAGAGAGAAACAAGGACAAAATGCAGATGCTGTGACTAGATAGCTGAGAACTGTTTAACAAGCAACCGGGCTTTTTAACTCTAGCAGTGACTTCAGGACTACAACACATCCATTCGTATTGGCCAAAGCTGAAAGTGGCACTTATTTTCTTTATTAAAGTTAAACTGAAGTGGAAACATCT
GTTTCCACATGGAAGAACACTCAGTAGATTTCTGTCAGTCAACTGTAAAAATTGCCGATATGAACAGAAACGAAGACAAGAATGAACATGCTGTGATTAGATCGCTGAGAACTGTTATGAACAGAATGGTACGAACAAGCATTTGGTTTCGTGGTGAATACAACTCATCCATTCATATTGGCCAAAGTTGGAAGTGCAAC
TTTTTTATTTGGGG