sp|Q9LYN8|EMS1_ARATH ----> Leucine-rich repeat receptor protein kinase EMS1
Intron 1 GTAAAATACA ... TCTTGACCAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 3 | 2 | 4 |
| A2 | 38.46 | 4 | 4 | 1 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | 20 | 2 | 0 | 1 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 20 | 2 | 0 | 1 |
| A7 | 42.86 | 8 | 8 | 4 |
| A8 | 36.84 | 6 | 7 | 0 |
| A9 | 50 | 5 | 5 | 5 |
| A10 | 21.74 | 9 | 0 | 5 |
>TRINITY_DN44595_c0_g4_i1 from sample A9 / Example spliced isoformCATTTCTGATAATTATCTGACAGGAGTAGTCCCTGATGAATTGTGTGATCTTATGGATCTTAACTTCTTCAGTCTGTCAGATAATCTGCTGGAAGGAGCTATTCCTGAGGGTGGTGGATGTAGTAATTTTACGGCTTCTTCATTTGTTAGAAACAAGGGTGTGTGTGGAAAACTGATGGGCCAAAATTGCAATCTTAGTC
CAAGACAACAGCCTCATCTATTAAGCACTGGGGTGATTGTTGGGATCACAATAGGAAGCACCCTTTTTGTGCTCGGCCTCATATTTGCTTTGGTAAAATGGAAAATGTTAAAGCAAGAGGCTTTCCCTAAGGTGGATGAGAAGAGAAAATTGACTCCAGCCATTGAACCTACCCTTTCTATTATGAGTAGCAGCAAGTCA
AAAGAGCCCCTCAGCATAAATGTAGCCATGTTTGAAAGGCCTCTCCTTCGCCTGACATTGGCTGATATACTGCGGATTACAAATAATTTTTGTAAGACCAACATAATTGGAGATGGTGGGTTTGGTACAGTTTATAAAGCTGTACTGCCAGATGGAAGAACTGTAGCCATCAAAAAGCTTGGACAGGCTCGAACTCAGGG
TCATAGAGAATTTCTAGCAGAGATGGAGACCTTAGGAAAAGTCAAGCACAGAAATTTGGTTCCATTACTTGGATACTGCTCTTTCGGTGATGAGAAATTGTTGGTCTATGATTTTATGGTGAATGGGAGCCTTGATTATTGGCTAAGGAACAGAGCTGATGCATTGGAAGTCCTTGATTGGCCGAAACGCTGTAAAATTG
CTATGGGTTCAGCTAAGGGCCTTGCATTTCTTCATCATGGCTTCATCCCTCACATCATCCATAGAGACATGAAAAGTAGCAACATACTGCTGGATGCTGACTTTGAACCTAGAGTTGCAGACTTTGGATTGGCACGCCTTATTAGTGCCTGTGAGACTCATGTGAGCACAGATATAGCAGGTACCTTTGGATATATACCT
CCAGAATACGGTCAGAGTTGGAGATCAACAACCAGAGGTGATGTCTATAGCTTTGGGGTCATTTTGCTTGAGATGCTCACAGGGAAGGAACCAACTGGACCAAATTTCAAAGATATAGAAGGTGGTAACCTGGTAGGATGGGTTCAGCAGATGATCAACAAAGGGCAAGCAGCTGAGGCCTTGGATCCTGTCACTTCTAA
TGGATCTTGGAAGCTTCAAATGCTTCAAATGCTGCAAGTGGCCGCAATGTGCACTCATGATGATCCTGTCAAGCGCCCTAATATGCTGCAGGTTGTCAAGTTTCTTGGAGATATAGAAGGCCACCCTCCAAAATTTGGCTAAGATCATTGCTTTCATGTTTCTCTCATACCTCGCAATGGGACTAAGTTTATGGAAAAGC
CTAGATGAGAGCTATTGTTGGGCAATTTTTGGAAAGACCCAACTGAGAGTGAGTTGCTGGGCTATTTTCAAGATATCTGATTGGCATGAATATTACACAGCTAGTGATCTAACATAGTAGATATGTGCAAACATCTAGATTCTTCAGAAGATATATGTAGAATACCATACCTATTGTAACTACCATATGTTCTCAAACTT
TGCAGTGTTCTTGATTTGTTTCACAGAGCATATAGTGCAGCTAAGCCTATTTCTGTGTTCGTTGTATACAATGCTTCTACTAAAAATTTTTGAAAGAACC
>TRINITY_DN44595_c0_g4_i2 from sample A9 / Example unspliced isoform:CATTTCTGATAATTATCTGACAGGAGTAGTCCCTGATGAATTGTGTGATCTTATGGATCTTAACTTCTTCAGTCTGTCAGATAATCTGCTGGAAGGAGCTATTCCTGAGGGTGGTGGATGTAGTAATTTTACGGCTTCTTCATTTGTTAGAAACAAGGGTGTGTGTGGAAAACTGATGGGCCAAAATTGCAATCTTAGTC
CAAGACAACAGCCTCATCTATTAAGCACTGGGGTGATTGTTGGGATCACAATAGGAAGCACCCTTTTTGTGCTCGGCCTCATATTTGCTTTGGTAAAATGGAAAATGTTAAAGCAAGAGGCTTTCCCTAAGGTGGATGAGAAGAGAAAATTGACTCCAGCCATTGAACCTACCCTTTCTATTATGAGTAGCAGCAAGTCA
AAAGAGCCCCTCAGCATAAATGTAGCCATGTTTGAAAGGCCTCTCCTTCGCCTGACATTGGCTGATATACTGCGGATTACAAATAATTTTTGTAAGACCAACATAATTGGAGATGGTGGGTTTGGTACAGTTTATAAAGCTGTACTGCCAGATGGAAGAACTGTAGCCATCAAAAAGCTTGGACAGGCTCGAACTCAGGG
TCATAGAGAATTTCTAGCAGAGATGGAGACCTTAGGAAAAGTCAAGCACAGAAATTTGGTTCCATTACTTGGATACTGCTCTTTCGGTGATGAGAAATTGTTGGTCTATGATTTTATGGTGAATGGGAGCCTTGATTATTGGCTAAGGAACAGAGCTGATGCATTGGAAGTCCTTGATTGGCCGAAACGCTGTAAAATTG
CTATGGGTTCAGCTAAGGGCCTTGCATTTCTTCATCATGGCTTCATCCCTCACATCATCCATAGAGACATGAAAAGTAGCAACATACTGCTGGATGCTGACTTTGAACCTAGAGTTGCAGACTTTGGATTGGCACGCCTTATTAGTGCCTGTGAGACTCATGTGAGCACAGATATAGCAGGTACCTTTGGATATATACCT
CCAGAATACGGTCAGAGTTGGAGATCAACAACCAGAGGTGATGTCTATAGCTTTGGGGTCATTTTGCTTGAGATGCTCACAGGGAAGGAACCAACTGGACCAAATTTCAAAGATATAGAAGGTGGTAACCTGGTAGGATGGGTTCAGCAGATGATCAACAAAGGGCAAGCAGCTGAGGCCTTGGATCCTGTCACTTCTAA
TGGATCTTGGAAGCTTCAAATGCTTCAAATGCTGCAAGTGGCCGCAATGTGCACTCATGATGATCCTGTCAAGCGCCCTAATATGCTGCAGGTTGTCAAGTTTCTTGGAGATATAGAAGGCCACCCTCCAAAATTTGGCTAAGATCATTGgtaaaatacatcaatattataggcgatttttgcagcttcatttcaagtag
ctcttgtttcctttcaattggtgcccatctgcttctttctgtgtgtttgttatttgtcaattttattgtataaatcaatctgtgtgtttgttatttgtcaattttattctataaatcaagcttatactggcttttgtttcttgaccagCTTTCATGTTTCTCTCATACCTCGCAATGGGACTAAGTTTATGGAAAAGCCT
AGATGAGAGCTATTGTTGGGCAATTTTTGGAAAGACCCAACTGAGAGTGAGTTGCTGGGCTATTTTCAAGATATCTGATTGGCATGAATATTACACAGCTAGTGATCTAACATAGTAGATATGTGCAAACATCTAGATTCTTCAGAAGATATATGTAGAATACCATACCTATTGTAACTACCATATGTTCTCAAACTTTG
CAGTGTTCTTGATTTGTTTCACAGAGCATATAGTGCAGCTAAGCCTATTTCTGTGTTCGTTGTATACAATGCTTCTACTAAAAATTTTTGAAAGAACC