sp|Q6YUU5|MDR_ORYSJ ----> Putative multidrug resistance protein
Intron 1 GTAAGTATCT ... GTGGCAGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 67.57 | 6 | 11 | 14 |
| A2 | 85.71 | 1 | 3 | 9 |
| A3 | 55.56 | 8 | 10 | 10 |
| A4 | 45.45 | 6 | 2 | 8 |
| A5 | 63.64 | 2 | 3 | 4 |
| A6 | 81.82 | 1 | 3 | 6 |
| A7 | 75 | 2 | 12 | 0 |
| A8 | 28.57 | 5 | 3 | 1 |
| A9 | 50 | 2 | 4 | 0 |
| A10 | 33.33 | 2 | 0 | 2 |
>TRINITY_DN38941_c1_g1_i1 from sample A8 / Example spliced isoformTCCCTGAATTCCTGAACACGCCTTTCCATTGACGGACGGATATGTAATGAATGGTATGAGAGCCCAACTCCATAACCTCCATTTCTTTGGCCATGGGAACTTAAGGAATATTGGGCCACGTGAAGATCTGATCTATAGACCCAATGGGGCATACAGTACATTGGTGCAACTGCAACAAGCCACAACAGATGAGAAAGTAG
AAGGACACAATAGGAGTTGTAGCATAGTAAGTAGATCCAGTTCTAACATGTCCGTTTGTAGCATAAGGTGCCTTTTACCCCTTCATTCCGTCGACTGTTGCTTTTAAATGCTCCGGAATGGAAGCAGGCCCTATTAGGATGTTCAGGAGCCTTAGCTTTTGGAGCAGTTCAACCTGTTTATTCCTTCTTTTCCAGGGCCA
TGTTATCTGTATTTTTTGTGAAGGACCACGACGAGATCAAATCCAAAGTCGGAGAATACTGCCTCATTTTTGTGGGCTTGGGACTAATCTCCTTCTTAGTAAATGCTTTACAGCATTGCAATTTCGTAGAGATGTGGGAATATTTAACAAAAAGGGTTCGGGAGCAGATGATGCCAACATCCTTACTTTTGAGGTTGGAT
GGTTCGATAAGGACGATAATTCTAGCGGAGCTGTTTGCTCCAGACTTGTAACAGATGCTAATGTGCCTTTACAATGGGTTTGACTATAGCATGGCGTGTTGCGATTCGCAGGCAATCCCTCACAATAATATGTTTCTACAACAGAAAGGTTCTCCTCAGGGCCATGTCTGAAAAGGCTCTCGGAGCTCAAGATTAGGATG
GATCAGGTGATTCAACTTGCGGCAGAAGCTGTCGCTAACCATCACACCATTAGTACCTTGTCTTCACAGGAGAAAATTATATTTCTTTCCGAAAAATCTCAAGAGGCCCGACATAGAGATAGTATCAAACAATCTTGGATTGCAGGAATAGTTTTGGGGTCATCATAATGCATCAGTCTATGCAATTGGGCCCTCTATTT
TTGGTACGGAGGGCACCTTCTTTACAAAGGTTATATCAACGCCAAAGCTCTTTCTAAAACCTTCTACATTTTGGTAAGCACCGGACGAGTGATAGCAGATGCAGGGAGTATGAGCAACAACATTGCTAAAGGTTCTGATGCAGTGAAATCCGTGTTCTACATCCTAGATAGAAAAAGTGGCATAAACCCAGACAATGATG
AGGGCGAGAGGCCGGAGAAGATATAAGGAGATGTGCATTTGAAAAACGTGGATTTCGCCTACCCATCTCGTCAATATCTGATGATCTTCAAGACTTCTGCTTGAGGATAAAAGCAGGCACCTCCATGGCTCTTGTAGGTCAAAGAGGTTTAGGAAAGTCAACCATCATAGGACTGGTCGAAAGATTCTATGACCCCCTAA
AAGGGACGGTGGGGGATGGATGGCAGGGATATCAGGACGGTCAATCTGAAGAGTCTGAGAAAACTTAACGTCTGGTAGGTCAGGATCCCACCCTGTTTGCAGGCAGCATTCGAGACAACATCCTCTACGGAAAAGAGAATA
>TRINITY_DN38941_c1_g1_i2 from sample A8 / Example unspliced isoform:TCCCTGAATTCCTGAACACGCCTTTCCATTGACGGACGGATATGTAATGAATGGTATGAGAGCCCAACTCCATAACCTCCATTTCTTTGGCCATGGGAACTTAAGGAATATTGGGCCACGTGAAGATCTGATCTATAGACCCAATGGGGCATACAGTACATTGGTGCAACTGCAACAAGCCACAACAGATGAGAAAGTAG
AAGGACACAATAGGAGTTGTAGCATAGTAAGTAGATCCAGTTCTAACATGTCCGTTTGTAGCATAAGGTGCCTTTTACCCCTTCATTCCGTCGACTGTTGCTTTTAAATGCTCCGGAATGGAAGCAGGCCCTATTAGGATGTTCAGGAGCCTTAGCTTTTGGAGCAGTTCAACCTGTTTATTCCTTCTTTTCCAGGGCCA
TGTTATCTGTATTTTTTGTGAAGGACCACGACGAGATCAAATCCAAAGTCGGAGAATACTGCCTCATTTTTGTGGGCTTGGGACTAATCTCCTTCTTAGTAAATGCTTTACAGCATTGCAATTTCGTAGAGATGTGGGAATATTTAACAAAAAGGGTTCGGGAGCAGATGATGCCAACATCCTTACTTTTGAGGTTGGAT
GGTTCGATAAGGACGATAATTCTAGCGGAGCTGTTTGCTCCAGACTTGTAACAGATGCTAATGTGgtaagtatctacacgaaaagttttaatgttcgtgtgggagattgtgttcacaactttttaacgattagtgtgtgcatttatgatacagctgagatctctggttggagatcatatatcgctaattgtgcaaattgt
gtttgttgtggcagtagCCTTTACAATGGGTTTGACTATAGCATGGCGTGTTGCGATTCGCAGGCAATCCCTCACAATAATATGTTTCTACAACAGAAAGGTTCTCCTCAGGGCCATGTCTGAAAAGGCTCTCGGAGCTCAAGATTAGGATGGATCAGGTGATTCAACTTGCGGCAGAAGCTGTCGCTAACCATCACACC
ATTAGTACCTTGTCTTCACAGGAGAAAATTATATTTCTTTCCGAAAAATCTCAAGAGGCCCGACATAGAGATAGTATCAAACAATCTTGGATTGCAGGAATAGTTTTGGGGTCATCATAATGCATCAGTCTATGCAATTGGGCCCTCTATTTTTGGTACGGAGGGCACCTTCTTTACAAAGGTTATATCAACGCCAAAGC
TCTTTCTAAAACCTTCTACATTTTGGTAAGCACCGGACGAGTGATAGCAGATGCAGGGAGTATGAGCAACAACATTGCTAAAGGTTCTGATGCAGTGAAATCCGTGTTCTACATCCTAGATAGAAAAAGTGGCATAAACCCAGACAATGATGAGGGCGAGAGGCCGGAGAAGATATAAGGAGATGTGCATTTGAAAAACG
TGGATTTCGCCTACCCATCTCGTCAATATCTGATGATCTTCAAGACTTCTGCTTGAGGATAAAAGCAGGCACCTCCATGGCTCTTGTAGGTCAAAGAGGTTTAGGAAAGTCAACCATCATAGGACTGGTCGAAAGATTCTATGACCCCCTAAAAGGGACGGTGGGGGATGGATGGCAGGGATATCAGGACGGTCAATCTG
AAGAGTCTGAGAAAACTTAACGTCTGGTAGGTCAGGATCCCACCCTGTTTGCAGGCAGCATTCGAGACAACATCCTCTACGGAAAAGAGAATACAAGCGAGGCCGAGATGATCGAAGCTGCAAAGGCTGCCAATGCTCACGACTTCATCAGGTAAATACTGCTATTTATATGCGATATATTAAGATAGATAGCGAAATTA
ACTTTGGATTTTTGTAGCGCTTTGGAGGAGTGACCATGCTCCTTGGGATGTGACTTGTTTCTATGCACAAGATTTTCAAGAATTTTAATTTTATTATTTATTTTCTTTTAATGTTTATCAAATATGTTACTACGGAAGTCCTCTGCCTACACAAGAAAATAGCTACATAAGGAAGCAGAATTAGCATGTCTGCTTTGCCA
ATCTGCTTTAAATATTTTGAGTGAGCAAATTAATTGAGCAGCATGAAAAATACATACCCAGAATAAAAGTAAAC
Intron 2 GTAAGTATCT ... GTTGTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 67.57 | 6 | 11 | 14 |
| A2 | 85.71 | 1 | 3 | 9 |
| A3 | 55.56 | 8 | 10 | 10 |
| A4 | 45.45 | 6 | 2 | 8 |
| A5 | 63.64 | 2 | 3 | 4 |
| A6 | 81.82 | 1 | 3 | 6 |
| A7 | 75 | 2 | 12 | 0 |
| A8 | 25 | 6 | 3 | 1 |
| A9 | 50 | 2 | 4 | 0 |
| A10 | 33.33 | 2 | 0 | 2 |
>TRINITY_DN41836_c1_g1_i2 from sample A9 / Example spliced isoformCTTAAGGAATATTGGGCCACGTGAAGATCTGATCTATAGACCCAATGGGGCATACAGTACATTGGTGCAACTGCAACAAGCCACAACAGATGAGAAAGTAGAAGGACACAATAGGAGTTGTAGCATAGTAAGTAGATCCAGTTCTAACATGTCCGTTTGTAGCATAAGGTGCCTTTTACCCCTTCATTCCGTCGACTGTT
GCTTTTAAATGCTCCGGAATGGAAGCAGGCCCTATTAGGATGTTCAGGAGCCTTAGCTTTTGGAGCAGTTCAACCTGTTTATTCCTTCTTTTCCAGGGCCATGTTATCTGTATTTTTTGTGAAGGACCACGACGAGATCAAATCCAAAGTCGGAGAATACTGCCTCATTTTTGTGGGCTTGGGACTAATCTCCTTCTTAG
TAAATGTTTAACAGCATTGCAATTTCGTAGCTATGTGGGAATATATAACAAAAAGGGTTCGGGAGCAGATGATGCCAACATCCTTACTTTTGAGGTTGGATGGTTCGATAAGGACGATAATTCTAGCGGAGCTGTTTGCTCCAGACTTGTAACAGATGCTAATGTGTAGCCTTTACAATGGGTTTGACTATAGCATGGCG
TGTTGCGATTCGCAGGCAACCCCTCACAATAATATGTTTCTACAACAGAAAGGTTCTCCTCAGGGCCATGTCTGAAAAGGCTCTCGGAGCTCAAGATTAGGGTGGATCAGGTGATTCAACTTGCGGCAGAAGCTGTCGCTAACCATCACACCATTAGTACCTTGTCTTCACAGGAGAAAATTATATTTCTTTCCGAAAAA
TCTCAAGAGGCCCGACATAGAGATAGTATCAAACAATCTTGGATTGCAGGAATAGTTTTGGGGTCATCATAATGCATCAGTCTATGCAATTGGGCCCTCTATTTTTGGTACGGAGGGCACCTTCTTTACAAAGGTTATATCAACGCCAAAGCTCTTTCTAAAACCTTCTACATTTTGGTAAGCACCGGACGAGTGATAGC
AGATGCAGGGAGTATGAGCAACAACATTGCTAAAGGTTCTGATGCAGTGAAATCCGTGTTCTACATCCTAGATAGAAAAAGTGGCATAAACCCAGACAATGATGAGGGCGAGAGGCCGGAGAAGATATAAGGAGATGTGCATTTGAAAAACGTGGATTTCGCCTACCCATCTCGTCAATATCTGATGATCTTCAAGACTT
CTGCTTGAGGATAAAAGCAGGCACCTCCATGGCTCTTGTAGGTCAAAGAGGTTTAGGAAAGTCAACCATCATAGGACTGGTCGAAAGATTCTATGACCCCCTAAAAGGGACGGTGGGGGATGGATGGCAGGGATATCAGGACGGTCAATCTGAAGAGTCTGAGAAAACATAACGTCTGGTAGGTCAGGATCCCACCCTGT
TTGCAGGCAGCATTCGAGACAACATCCTCTACGGAAAAGAGAATATAAGTGAGGCCGAGATGATCGAAGCTGCAAAGGCTGCCAATGCTCACGACCAGGGATCAAGATTGAAGGGCTGGTCTTAATTTCATATTGAAGGTTATATATTCATGCAGCCCTTCATTGATGAAGGGCTTTCAAAAAAACTCACATTTCAAATG
ACAGTAATAGATTAATTGCACACTTCATTAAAAAAATGTGCTAAAAAGATAATGCATTTCAATTAAATTTCT
>TRINITY_DN41836_c1_g1_i4 from sample A9 / Example unspliced isoform:CTTAAGGAATATTGGGCCACGTGAAGATCTGATCTATAGACCCAATGGGGCATACAGTACATTGGTGCAACTGCAACAAGCCACAACAGATGAGAAAGTAGAAGGACACAATAGGAGTTGTAGCATAGTAAGTAGATCCAGTTCTAACATGTCCGTTTGTAGCATAAGGTGCCTTTTACCCCTTCATTCCGTCGACTGTT
GCTTTTAAATGCTCCGGAATGGAAGCAGGCCCTATTAGGATGTTCAGGAGCCTTAGCTTTTGGAGCAGTTCAACCTGTTTATTCCTTCTTTTCCAGGGCCATGTTATCTGTATTTTTTGTGAAGGACCACGACGAGATCAAATCCAAAGTCGGAGAATACTGCCTCATTTTTGTGGGCTTGGGACTAATCTCCTTCTTAG
TAAATGTTTAACAGCATTGCAATTTCGTAGCTATGTGGGAATATATAACAAAAAGGGTTCGGGAGCAGATGATGCCAACATCCTTACTTTTGAGGTTGGATGGTTCGATAAGGACGATAATTCTAGCGGAGCTGTTTGCTCCAGACTTGTAACAGATGCTAATGTGgtaagtatctacacgaaaagttttaatgttcgtg
tgggagattgtgttcacaactttttaacgattagtgtgtgcatttatgatacagctgagatctctggttggagatcatatatcgctaattgtgcaaattgtgtttgttgtggcagTAGCCTTTACAATGGGTTTGACTATAGCATGGCGTGTTGCGATTCGCAGGCAACCCCTCACAATAATATGTTTCTACAACAGAAA
GGTTCTCCTCAGGGCCATGTCTGAAAAGGCTCTCGGAGCTCAAGATTAGGGTGGATCAGGTGATTCAACTTGCGGCAGAAGCTGTCGCTAACCATCACACCATTAGTACCTTGTCTTCACAGGAGAAAATTATATTTCTTTCCGAAAAATCTCAAGAGGCCCGACATAGAGATAGTATCAAACAATCTTGGATTGCAGGA
ATAGTTTTGGGGTCATCATAATGCATCAGTCTATGCAATTGGGCCCTCTATTTTTGGTACGGAGGGCACCTTCTTTACAAAGGTTATATCAACGCCAAAGCTCTTTCTAAAACCTTCTACATTTTGGTAAGCACCGGACGAGTGATAGCAGATGCAGGGAGTATGAGCAACAACATTGCTAAAGGTTCTGATGCAGTGAA
ATCCGTGTTCTACATCCTAGATAGAAAAAGTGGCATAAACCCAGACAATGATGAGGGCGAGAGGCCGGAGAAGATATAAGGAGATGTGCATTTGAAAAACGTGGATTTCGCCTACCCATCTCGTCAATATCTGATGATCTTCAAGACTTCTGCTTGAGGATAAAAGCAGGCACCTCCATGGCTCTTGTAGGTCAAAGAGG
TTTAGGAAAGTCAACCATCATAGGACTGGTCGAAAGATTCTATGACCCCCTAAAAGGGACGGTGGGGGATGGATGGCAGGGATATCAGGACGGTCAATCTGAAGAGTCTGAGAAAACATAACGTCTGGTAGGTCAGGATCCCACCCTGTTTGCAGGCAGCATTCGAGACAACATCCTCTACGGAAAAGAGAATATAAGTG
AGGCCGAGATGATCGAAGCTGCAAAGGCTGCCAATGCTCACGACCAGGGATCAAGATTGAAGGGCTGGTCTTAATTTCATATTGAAGGTTATATATTCATGCAGCCCTTCATTGATGAAGGGCTTTCAAAAAAACTCACATTTCAAATGACAGTAATAGATTAATTGCACACTTCATTAAAAAAATGTGCTAAAAAGATA
ATGCATTTCAATTAAATTTCT