sp|Q9SJU9|GC1_ARATH ----> Epimerase family protein SDR39U1 homolog, chloroplastic
Intron 1 GTAAGTTGGA ... ATTTGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | 50 | 4 | 2 | 6 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | 100 | 0 | 2 | 1 |
| A5 | 20 | 2 | 1 | 0 |
| A6 | 25 | 3 | 1 | 1 |
| A7 | 66.67 | 5 | 6 | 14 |
| A8 | 66.67 | 4 | 8 | 8 |
| A9 | 55.56 | 6 | 13 | 2 |
| A10 | 42.86 | 2 | 3 | 0 |
>TRINITY_DN31755_c0_g2_i2 from sample A6 / Example spliced isoformCAGAATTTCAACACAAAACCAAGAACTTTCAGCGAGGCAAATGCACCAATGCTGTCTGAGCATGGATATCTGGAGGAGCTTAGGAAGACGTCAACAATGTTAGATATTGCACGTCTTGAAAATGAGAATCTAAGAATGCTTTATGCAGAATTGGAGGCCGAGTTAAAACATAATAAGCCAGATAAGAGGAACACTGCATG
CAAAGATCTAACATGTCGTAATTTGGCAAATGAACTTGAGGTTGTTGCGAAGGGTCCCCCTCCTAGGCCTGTATCCATCGTGAACAATTTCCTTGAGATGAGATCAAAGCCTGGTCATGGCATCAAGATGAAGAAAAAGGGTTCATTCAAAATTCCTGCAGAAAATCATGACAATGAAGTGTTCAAGATAAATGCTTCCG
ACAGTGCACTACAAAACCTCCATCCAGTAGAAATTAACAATCTCGGAAATATCAATATGAATAAGCGGAAAGCAGAGACCGACATGATTGATTTTCAGGCTGTGTCTGATTCTGCCATTATACAGTCAAATAGAAGCACTCCAAAAAGACAAAATAGAAGGCCTACAGACAGCAGAATAAGTATTCATTAACTCCCACGG
TCTAGAAACAAGTTCATGATATTCATTCAGTCCTACGAAAGCATGGAAACTTATTTTGTTGCACGTTTAAGGCTGTGCATTGCATATTAAAAACAAGCTCAGGGTGTGCATTGAGTGCTAGGAAAGCATGAAAACTTATTTTGTTGCACGTTAAGGCTGCGCGTTACAAATTAAAAAGATCTTTATCAGGTATTAGTTTG
TATTCTTCTCACTTTTCATTGCTTTTAAGTGAATGTTACAATTATCATCTGACTGGGTAAATACGACTTTTAAATTGCCTAAGAGCATGTAAAGATAGATAGAATGAACAATTCCCCACGTGGCTTGTCTGGTATTATTGTCCTCGAGAGGCATTGCATTGTTTGAAAGAACATACAAATTATATTAATATGTTGGGACA
AAACAACTGAAATTTAAG
>TRINITY_DN31755_c0_g2_i1 from sample A6 / Example unspliced isoform:CAGAATTTCAACACAAAACCAAGAACTTTCAGCGAGGCAAATGCACCAATGCTGTCTGAGCATGGATATCTGGAGGAGCTTAGGAAGACGTCAACAATGTTAGATATTGCACGTCTTGAAAATGAGAATCTAAGAATGCTTTATGCAGAATTGGAGGCCGAGTTAAAACATAATAAGCCAGATAAGAGGAACACTGCATG
CAAAGATCTAACATGTCGTAATTTGGCAAATGAACTTGAGGTTGTTGCGAAGGGTCCCCCTCCTAGGCCTGTATCCATCGTGAACAATTTCCTTGAGATGAGATCAAAGCCTGGTCATGGCATCAAGATGAAGAAAAAGGGTTCATTCAAAATTCCTGCAGAAAATCATGACAATGAAGTGTTCAAGATAAATGCTTCCG
ACAGTGCACTACAAAACCTCCATCCAGTAGAAATTAACAATCTCGGAAATATCAATATGAATAAGCGGAAAGCAGAGACCGACATGATTGATTTTCAGGCTGTGTCTGATTCTGCCATTATACAGTCAAATAGAAGCACTCCAAAAAGACAAAATAGAAGGCCTACAGACAGCAgtaagttggaggcttctctacaatct
cgacattgctttagcgatgttcgaaagtctaagaaaatgtgtcctgtaaatgtaaatttcttttctgcagcatttagtgttccgaaaataaaagcaccttaactatgttcaagctgttctgtttgtatattaccatatgtttcttatcgtagtcttctgaagatgctaaacaattcatttgtacagGAATAAGTATTCAT
TAACTCCCACGGTCTAGAAACAAGTTCATGATATTCATTCAGTCCTACGAAAGCATGGAAACTTATTTTGTTGCACGTTTAAGGCTGTGCATTGCATATTAAAAACAAGCTCAGGGTGTGCATTGAGTGCTAGGAAAGCATGAAAACTTATTTTGTTGCACGTTAAGGCTGCGCGTTACAAATTAAAAAGATCTTTATCA
GGTATTAGTTTGTATTCTTCTCACTTTTCATTGCTTTTAAGTGAATGTTACAATTATCATCTGACTGGGTAAATACGACTTTTAAATTGCCTAAGAGCATGTAAAGATAGATAGAATGAACAATTCCCCACGTGGCTTGTCTGGTATTATTGTCCTCGAGAGGCATTGCATTGTTTGAAAGAACATACAAATTATATTAA
TATGTTGGGACAAAACAACTGAAATTTAAG